Os01g0960200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF630 domain containing protein.
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Os01g0960200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF630 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.81 | 0.465 | 5.74 | 2.16 | 0.153 | -1.01 | -0.83 | 2.95 | 0.75 | 15.2 | 22.52 | 1181 | -- | -- |
| 102.49 | 0.472 | 5.82 | 1.47 | 0.133 | -0.855 | -1.14 | -- | 0.565 | 15.5 | 20.86 | 1075 | -- | -- |
| 99.56 | 0.465 | 5.75 | 2.12 | 0.159 | -1.04 | -- | 3 | 0.749 | 16.2 | 21.64 | 1065 | -- | -- |
| 105.18 | 0.478 | 5.84 | 1.39 | 0.222 | -0.992 | -- | -- | 0.542 | 16.7 | 17.72 | 914 | -- | -- |
| 100.85 | 0.468 | 5.74 | 2.15 | -- | -1.06 | -- | 3 | 0.76 | -- | 21.63 | 1096 | -- | -- |
| 121.05 | 0.516 | 5.87 | 1.09 | 0.298 | -- | -0.856 | -- | 0.363 | 14.1 | -- | -- | -- | -- |
| 123.73 | 0.521 | 5.87 | 1.07 | 0.297 | -- | -- | -- | 0.357 | 13.6 | -- | -- | -- | -- |
| 106.65 | 0.481 | 5.83 | 1.36 | -- | -0.917 | -- | -- | 0.544 | -- | 19.38 | 1064 | -- | -- |
| 147.01 | 0.565 | 5.89 | -- | 0.435 | -0.577 | -- | -- | 0.284 | 15.4 | 19.89 | 321 | -- | -- |
| 129.12 | 0.531 | 5.88 | 1.06 | -- | -- | -- | -- | 0.351 | -- | -- | -- | -- | -- |
| 153.79 | 0.58 | 5.9 | -- | 0.278 | -- | -- | -- | 0.238 | 13.4 | -- | -- | -- | -- |
| 149.71 | 0.57 | 5.88 | -- | -- | -0.513 | -- | -- | 0.319 | -- | 21.8 | 1050 | -- | -- |
| 158.54 | 0.588 | 5.9 | -- | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.16 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 6 | 97.11 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 8 | 97.31 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 11 | 97.49 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 21 |
| 13 | 97.55 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 27 | 97.72 | humidity | 90 | 43200 | < th | dose independent | sin | 16 | NA |
| 28 | 97.72 | humidity | 90 | 43200 | < th | dose independent | rect. | 12 | 15 |
| 35 | 97.75 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 39 | 97.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 40 | 97.77 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 90 | 97.96 | humidity | 90 | 43200 | < th | dose independent | no | NA | NA |
| 92 | 97.96 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 17 |
| 100 | 97.99 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 16 |
| 108 | 98.02 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 21 |
| 118 | 98.04 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 134 | 98.08 | humidity | 80 | 43200 | > th | dose dependent | rect. | 8 | 19 |
| 144 | 98.11 | humidity | 80 | 43200 | > th | dose dependent | rect. | 11 | 14 |
| 173 | 98.18 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 174 | 98.19 | humidity | 90 | 43200 | > th | dose independent | sin | 16 | NA |
| 175 | 98.19 | humidity | 80 | 43200 | > th | dose dependent | sin | 18 | NA |
| 193 | 98.23 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 194 | 98.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 198 | 98.24 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 199 | 98.24 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 13 |
| 291 | 98.40 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 316 | 98.43 | humidity | 80 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 331 | 98.46 | humidity | 80 | 43200 | > th | dose dependent | rect. | 4 | 22 |
| 347 | 98.48 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 355 | 98.49 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 406 | 98.57 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 464 | 98.68 | humidity | 90 | 43200 | < th | dose independent | sin | 5 | NA |
| 505 | 98.74 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 528 | 98.77 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 554 | 98.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 11 |
| 573 | 98.86 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 11 |
| 582 | 98.87 | humidity | 90 | 43200 | > th | dose independent | sin | 6 | NA |
| 613 | 98.91 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 627 | 98.94 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 713 | 99.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 723 | 99.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 759 | 99.09 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 765 | 99.11 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 771 | 99.11 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 796 | 99.15 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 878 | 99.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 17 |
| 952 | 99.33 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 971 | 99.35 | humidity | 80 | 43200 | > th | dose dependent | sin | 3 | NA |