BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0153000 Os05g0153000|AK073497
(849 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0153000 Gelsolin family protein 1598 0.0
Os06g0659300 Similar to Actin filament bundling protein P-1... 703 0.0
Os08g0240800 Similar to Actin filament bundling protein P-1... 644 0.0
Os04g0604000 Similar to Actin filament bundling protein P-1... 643 0.0
Os03g0356700 Similar to Villin 3 568 e-162
>Os05g0153000 Gelsolin family protein
Length = 849
Score = 1598 bits (4139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 776/849 (91%), Positives = 776/849 (91%)
Query: 1 MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN 60
MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN
Sbjct: 1 MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN 60
Query: 61 VHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQGS 120
VHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQGS
Sbjct: 61 VHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQGS 120
Query: 121 LSSHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGCNS 180
LSSHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGCNS
Sbjct: 121 LSSHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGCNS 180
Query: 181 SMQTRAKALDVVKHLKENRHCGRCEIATIEDGKLVGDSDAGDFWNLFGGYAPIPRDVQDT 240
SMQTRAKALDVVKHLKENRHCGRCEIATIEDGKLVGDSDAGDFWNLFGGYAPIPRDVQDT
Sbjct: 181 SMQTRAKALDVVKHLKENRHCGRCEIATIEDGKLVGDSDAGDFWNLFGGYAPIPRDVQDT 240
Query: 241 VMTELMTTSSKKLFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMTTLVSE 300
VMTELMTTSSKKLFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMTTLVSE
Sbjct: 241 VMTELMTTSSKKLFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMTTLVSE 300
Query: 301 RRTSVTALEDYVRCEGRQSNARSVILTEGHETVEFKMHFQHWPKNAVPKLYEAGREKVAA 360
RRTSVTALEDYVRCEGRQSNARSVILTEGHETVEFKMHFQHWPKNAVPKLYEAGREKVAA
Sbjct: 301 RRTSVTALEDYVRCEGRQSNARSVILTEGHETVEFKMHFQHWPKNAVPKLYEAGREKVAA 360
Query: 361 IFKHQGYDVTEIPEDKPRHFISCNGSLKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSY 420
IFKHQGYDVTEIPEDKPRHFISCNGSLKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSY
Sbjct: 361 IFKHQGYDVTEIPEDKPRHFISCNGSLKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSY 420
Query: 421 IEDGKDYHLFFAWSGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFK 480
IEDGKDYHLFFAWSGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFK
Sbjct: 421 IEDGKDYHLFFAWSGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFK 480
Query: 481 SLIIFKGGRSMAYKNFVSQRSDANGWYQKNGVALFRVQGLKHDCIRAIQVDLAASSLNSS 540
SLIIFKGGRSMAYKNFVSQRSDANGWYQKNGVALFRVQGLKHDCIRAIQVDLAASSLNSS
Sbjct: 481 SLIIFKGGRSMAYKNFVSQRSDANGWYQKNGVALFRVQGLKHDCIRAIQVDLAASSLNSS 540
Query: 541 HCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEPDRFWEALGGRS 600
HCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEPDRFWEALGGRS
Sbjct: 541 HCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEPDRFWEALGGRS 600
Query: 601 EYLREKQVKDWPADPHLYTCHFEQGLFKAKEVFSFSQDDLVTEEILILDCVEELHIWVGH 660
EYLREKQVKDWPADPHLYTCHFEQGLFKAKEVFSFSQDDLVTEEILILDCVEELHIWVGH
Sbjct: 601 EYLREKQVKDWPADPHLYTCHFEQGLFKAKEVFSFSQDDLVTEEILILDCVEELHIWVGH 660
Query: 661 QSGVLSKEQALDIGKMFLQAGIHQDGRRPIDTTMYIVTEGDEPRFFTSFFNWDYSKQTML 720
QSGVLSKEQALDIGKMFLQAGIHQDGRRPIDTTMYIVTEGDEPRFFTSFFNWDYSKQTML
Sbjct: 661 QSGVLSKEQALDIGKMFLQAGIHQDGRRPIDTTMYIVTEGDEPRFFTSFFNWDYSKQTML 720
Query: 721 GNSFERKLAILKGISQKLETPEXXXXXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXX 780
GNSFERKLAILKGISQKLETPE Q
Sbjct: 721 GNSFERKLAILKGISQKLETPERSLRKSSSSSLPRRSPGTSSSEPTTPEQRAAARTFASA 780
Query: 781 XXGKLLRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVARRLFPPSLHASAEA 840
GKLLRER TVARRLFPPSLHASAEA
Sbjct: 781 STGKLLRERSPAALSPSLSTPSPSPRSRSSASSSPASWNSTPSTVARRLFPPSLHASAEA 840
Query: 841 VATGTPRRR 849
VATGTPRRR
Sbjct: 841 VATGTPRRR 849
>Os06g0659300 Similar to Actin filament bundling protein P-115-ABP
Length = 1016
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/750 (45%), Positives = 506/750 (67%), Gaps = 11/750 (1%)
Query: 1 MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN 60
M+ VD F G G K GL+IW I + + K HG+F+TG++Y+IL T LK+G +H+
Sbjct: 51 MREVDAVFQGAGQKDGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHD 110
Query: 61 VHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQGS 120
+HYW+G++ +++ TA+ K +ELD ALG VQYRE QG E+++FLSYFKPCIIP +G
Sbjct: 111 IHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGG 170
Query: 121 LSSHMR--IYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGC 178
++S R ++ T +F C G+H V EVPF+RSSL+H +F++DT+SKIF F+G
Sbjct: 171 IASGFRHTEINEREHVTRLFVCRGKHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGS 230
Query: 179 NSSMQTRAKALDVVKHLKENRHCGRCEIATIEDGKLVGDSDAGDFWNLFGGYAPIPRDVQ 238
NSS+Q RAKAL+VV++LK++ H G+C++ ++EDGKL+ D+DAG+FW LFGG+AP+PR
Sbjct: 231 NSSIQERAKALEVVQYLKDSNHEGKCDVGSVEDGKLMADADAGEFWGLFGGFAPLPRKTF 290
Query: 239 DTVMTELMTTSSKKLFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMTTLV 298
+ + SSK L +NK VPV+ ++L RE+L+S + Y+LDCG+E+++WMG T +
Sbjct: 291 SDLNGKDSAFSSK-LICLNKGQTVPVDFDVLTRELLDSTKCYLLDCGSEIYVWMGRETPL 349
Query: 299 SERRTSVTALEDYVRCEGRQSNARSVILTEGHETVEFKMHFQHWPKNAVPKLYEAGREKV 358
ER+ + +A E+ +R E + + V L EG ETV F+ F WPK A + + R KV
Sbjct: 350 EERKRAGSAAEELLR-EVNRPKSHIVRLMEGFETVIFRSKFSKWPKKADAVVSDESRGKV 408
Query: 359 AAIFKHQGYDVTEIPE-----DKPRHFISCNGSLKVWLVDNGSVTLLCTEEQEQLYNGDC 413
AA+ K QG++V + + ++P+ I C G+L+VW V+ T L EQ + Y+GDC
Sbjct: 409 AALLKRQGFNVKGLAKAAPVKEEPQPQIDCTGNLQVWRVNGTEKTFLSFSEQCKFYSGDC 468
Query: 414 YIIRYSYIEDGKDYHLFFAWSGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEGREPE 473
YI +YSY + + L W G S+ +++ A S+ S M++S+K AV+ +++EG+EP
Sbjct: 469 YIFQYSYPGEEGEECLIGTWFGKKSVQDEKTTAISVASKMVESLKFQAVMVRLYEGKEPA 528
Query: 474 MFFLVFKSLIIFKGGRSMAYKNFVSQRSDANGWYQKNGVALFRVQGLKHDCIRAIQVDLA 533
FF +F++L+IFKGG S YK FVS+ + Y +NGVALFRVQG + ++AIQVD A
Sbjct: 529 EFFSIFQNLVIFKGGVSTGYKKFVSENGIEDDTYSENGVALFRVQGSGPENMQAIQVDTA 588
Query: 534 ASSLNSSHCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEPDRFW 593
A+SLNSS+CY+L G + FTW+G+LSS D L +R +D + P QS +++EGSE D+FW
Sbjct: 589 ATSLNSSYCYVLHDGDTLFTWIGNLSSSMDQELAERQLDVIKPNLQSRMLKEGSEYDQFW 648
Query: 594 EALGGRSEYLREKQVKDWPADPHLYTCHFEQGLFKAKEVFSFSQDDLVTEEILILDCVEE 653
+ LG +SEY +K KD +DPHL++C F +G+ K +E+F+F+QDDL+TE++ ILDC
Sbjct: 649 KLLGVKSEYPSQKIAKDQESDPHLFSCTFSKGVLKVREIFNFTQDDLMTEDVFILDCHSC 708
Query: 654 LHIWVGHQSGVLSKEQALDIGKMFLQAGIHQDGRRPIDTTMYIVTEGDEPRFFTSFFNWD 713
+ +WVG + + QAL +G+ FL+ I + +T +Y++TEG EP+FFT FF WD
Sbjct: 709 VFVWVGQRVDTKMRAQALSVGEKFLELDILMENSSQ-ETPVYVITEGSEPQFFTRFFTWD 767
Query: 714 YSKQTMLGNSFERKLAILK-GISQKLETPE 742
+K M GNSFER+L+I+K G+ KL+ P+
Sbjct: 768 SAKSAMHGNSFERRLSIVKDGVKPKLDKPK 797
>Os08g0240800 Similar to Actin filament bundling protein P-115-ABP
Length = 955
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/744 (44%), Positives = 487/744 (65%), Gaps = 17/744 (2%)
Query: 1 MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN 60
MK +D AF G G K GL+IW I + I S +GKF+ G++YIIL T LK+G +H+
Sbjct: 5 MKDLDPAFRGAGQKEGLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHD 64
Query: 61 VHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQGS 120
+HYW+G++ +++ TA+ +ELD ALG VQYRE QG E+DKFLSYF+PCI+P G
Sbjct: 65 IHYWIGKDTSQDESGTAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGG 124
Query: 121 LSS---HMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSG 177
++S H+ + ++ +T ++ C G V V EVPF+RSSL+H +F++DT+SKIF F+G
Sbjct: 125 VASGFKHVEV-NEQEHETRLYVCTGNRVVHVKEVPFARSSLNHDDIFILDTKSKIFQFNG 183
Query: 178 CNSSMQTRAKALDVVKHLKENRHCGRCEIATIEDGKLVGDSDAGDFWNLFGGYAPIPR-- 235
NSS+Q RAKAL+VV+++K+ H G+CE+A +EDG+L+ D++AG+FW FGG+AP+PR
Sbjct: 184 SNSSIQERAKALEVVQYIKDTFHEGKCEVAAVEDGRLMADAEAGEFWGFFGGFAPLPRRA 243
Query: 236 DVQDTVMTELMTTSSKKLFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMT 295
V+D E + KL N+ L P+ L E+L +++ Y+LDCG E+F+WMG T
Sbjct: 244 PVEDN---EKYEETVFKLLCFNQGKLEPINYESLLHELLKTNKCYLLDCGVELFVWMGRT 300
Query: 296 TLVSERRTSVTALEDYVRCEGRQSNARSVILTEGHETVEFKMHFQHWPKNAVPKLY-EAG 354
T + ER+++ A E + + R + + + EG ETV FK F+ WP+ KL E G
Sbjct: 301 TSLQERKSASEAAEKLLSDDNR-TKTHVIKVIEGFETVMFKSKFKEWPQTPDLKLSSEDG 359
Query: 355 REKVAAIFKHQGYDVTEI-----PEDKPRHFISCNGSLKVWLVDNGSVTLLCTEEQEQLY 409
R KVAA+ K QG +V + +++P+ +I C GSL+VW +++ LL + +Q + Y
Sbjct: 360 RGKVAALLKRQGLNVKGLMKAAPAKEEPQAYIDCTGSLQVWRINDKDKILLPSADQSKFY 419
Query: 410 NGDCYIIRYSYIEDGKDYHLFFAWSGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEG 469
GDCYI +Y Y D K+ L +W G SI EDRV A SL S M++S K AV +++EG
Sbjct: 420 TGDCYIFQYMYPGDDKEECLIGSWFGKKSIEEDRVTAISLASKMVESAKFQAVQTRLYEG 479
Query: 470 REPEMFFLVFKSLIIFKGGRSMAYKNFVSQRSDANGWYQKNGVALFRVQGLKHDCIRAIQ 529
+EP FF++F+S +FKGG S YK F+++ + Y ++G+ALFR+QG + ++AIQ
Sbjct: 480 KEPIQFFVIFQSFQVFKGGLSSGYKKFIAENGIDDDTYLEDGLALFRIQGSGPENMQAIQ 539
Query: 530 VDLAASSLNSSHCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEP 589
VD AASSLNSS+ YIL G + FTW G+L++ D +++R +D + P QS +EGSE
Sbjct: 540 VDAAASSLNSSYSYILHDGNTVFTWTGNLTTSLDQEVVERQLDIIKPNSQSRSQKEGSET 599
Query: 590 DRFWEALGGRSEYLREKQVKDWPADPHLYTCHFEQGLFKAKEVFSFSQDDLVTEEILILD 649
D+FW LGG+SEY +K + +DPHL++C +G K KE++ F+QDDL+TE++ ILD
Sbjct: 600 DQFWSLLGGKSEYPSQKIGRANESDPHLFSCILPKGNLKIKEIYHFTQDDLMTEDVFILD 659
Query: 650 CVEELHIWVGHQSGVLSKEQALDIGKMFLQAGIHQDGRRPIDTTMYIVTEGDEPRFFTSF 709
C ++ +WVG Q V + QALDIG+ F++ + DT ++++ EG EP FFT F
Sbjct: 660 CHSDIFVWVGQQVDVKVRLQALDIGEKFVKLDFLMENLSS-DTPIFVIMEGSEPTFFTRF 718
Query: 710 FNWDYSKQTMLGNSFERKLAILKG 733
F WD +K M GNS++RKL+I+KG
Sbjct: 719 FTWDSAKSLMHGNSYQRKLSIVKG 742
>Os04g0604000 Similar to Actin filament bundling protein P-115-ABP
Length = 946
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/742 (44%), Positives = 476/742 (64%), Gaps = 13/742 (1%)
Query: 1 MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN 60
MK VD AF GVG K GL++W I + + S HGKFY G++YIIL T LK+G +H+
Sbjct: 5 MKDVDPAFRGVGQKDGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHD 64
Query: 61 VHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQGS 120
+HYW+G++ +++ TA+ +ELD ALG VQYRE QG E++K LSYF+PCI+P G
Sbjct: 65 LHYWLGKDTSQDEAGTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGG 124
Query: 121 LSSHMRIYGDKSKD--TTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGC 178
++S +D T ++ C+G+HV V EVPF RSSL+H+ +F++DT +KIF F+G
Sbjct: 125 VASGFNHVEVNQQDHVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGS 184
Query: 179 NSSMQTRAKALDVVKHLKENRHCGRCEIATIEDGKLVGDSDAGDFWNLFGGYAPIPRDVQ 238
NS +Q RAKAL+VV+++K+ H G+CE+A +EDGKL+ D++AG+FW LFGG+AP+P+
Sbjct: 185 NSCIQERAKALEVVQYIKDTFHEGKCEVAAVEDGKLMADTEAGEFWGLFGGFAPLPKKTS 244
Query: 239 DTVMTELMTTSSKKLFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMTTLV 298
+ T +K L N+ L + LE E+L +++ Y+LDCG E+++WMG T +
Sbjct: 245 SEDNGDDKETVTK-LLCFNQGTLEHISFESLEHELLETNKCYLLDCGAEMYVWMGRGTSL 303
Query: 299 SERRTSVTALEDYVRCEGRQ-SNARSVILTEGHETVEFKMHFQHWPKNAVPKLY-EAGRE 356
R+ + A E + E R+ SN VI EG ET+ FK F WP KL E GR
Sbjct: 304 QVRKGASEAAEKLLIDENRKGSNVIKVI--EGFETIMFKSKFNKWPPTPDLKLSSEDGRG 361
Query: 357 KVAAIFKHQGYDVTEI-----PEDKPRHFISCNGSLKVWLVDNGSVTLLCTEEQEQLYNG 411
KVAA+ + QG DV + E++P+ +I C G L+VW V+ TLL + +Q +LY G
Sbjct: 362 KVAALLRSQGLDVKGLMKAAPEEEEPQPYIDCTGHLQVWRVNGDGKTLLSSSDQSKLYTG 421
Query: 412 DCYIIRYSYIEDGKDYHLFFAWSGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEGRE 471
DCYI +Y+Y D K+ L W G S+ EDR +A SL S M + K A A+++EG+E
Sbjct: 422 DCYIFQYTYTGDDKEECLIGTWFGKKSVEEDRTSAISLASKMFQAAKFQAAQARLYEGKE 481
Query: 472 PEMFFLVFKSLIIFKGGRSMAYKNFVSQRSDANGWYQKNGVALFRVQGLKHDCIRAIQVD 531
P FF++F+SL +FKGG S YKNF++ + Y + G+ALFR+QG + ++AIQVD
Sbjct: 482 PIQFFVIFQSLQVFKGGLSSGYKNFIAVNGTDDDTYVEGGLALFRIQGSGSENMQAIQVD 541
Query: 532 LAASSLNSSHCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEPDR 591
+SSLNSS+CYIL G + FTW G+L++ D++L++R +D + P S +EG E D+
Sbjct: 542 AVSSSLNSSYCYILHNGNTVFTWTGNLTTSLDNDLVERQLDVIKPDLPSRSQKEGRETDQ 601
Query: 592 FWEALGGRSEYLREKQVKDWPADPHLYTCHFEQGLFKAKEVFSFSQDDLVTEEILILDCV 651
FWE LGG+ +Y +K K+ +DPHL++C + K KE+ F+QDDL+ E+I +LDC
Sbjct: 602 FWELLGGKCKYSNKKIGKENESDPHLFSCILSKENLKVKEIHHFTQDDLMAEDIFVLDCR 661
Query: 652 EELHIWVGHQSGVLSKEQALDIGKMFLQAGIHQDGRRPIDTTMYIVTEGDEPRFFTSFFN 711
+L +WVG + + QA+DIG+ FL + DT ++IVTEG EP+FFT FF
Sbjct: 662 TDLFVWVGQEVDAKLRSQAMDIGEKFLLHDFLMENLSQ-DTPIFIVTEGSEPQFFTRFFT 720
Query: 712 WDYSKQTMLGNSFERKLAILKG 733
WD +K M G+S++RKLAI+KG
Sbjct: 721 WDSAKSLMHGSSYQRKLAIVKG 742
>Os03g0356700 Similar to Villin 3
Length = 966
Score = 568 bits (1463), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/743 (37%), Positives = 453/743 (60%), Gaps = 18/743 (2%)
Query: 4 VDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSG-VRQHNVH 62
+D AF GVG KPG +IW I + + K+ +GKFY G++YI+L T K G ++H
Sbjct: 8 LDPAFQGVGQKPGTEIWRIQDFKPVPLPKADYGKFYNGDSYIVLQTTCSKGGGAYLFDIH 67
Query: 63 YWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQGSLS 122
+W+G+++ +++ TA+ K +ELD LG VQ+RE QG ESDKFLSYFKPCIIP++G +
Sbjct: 68 FWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLEGGFA 127
Query: 123 SHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGCNSSM 182
S + + +T ++ C+G+ RV EVPF+RSSL+H VF++DTE KI+ F+G NS++
Sbjct: 128 SGFKTPEEDKFETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNGANSNI 187
Query: 183 QTRAKALDVVKHLKENRHCGRCEIATIEDGKLVGDSDAGDFWNLFGGYAPIPRDV--QDT 240
Q RAKAL+ ++HLKE H G C++A ++DGKL +SD+G+FW LFGG+API + D
Sbjct: 188 QERAKALEAIQHLKETYHNGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKAICDDD 247
Query: 241 VMTELMTTSSKKLFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMTTLVSE 300
V+ E T++ KL+ IN L +E +L + +L +++ +++DCG+++F+W+G T V E
Sbjct: 248 VVLE---TTAPKLYSINNGQL-KLEDTVLTKSILENNKCFLVDCGSDLFIWVGRLTQVEE 303
Query: 301 RRTSVTALEDYVRCEGRQSNARSVILTEGHETVEFKMHFQHWPKNAVPKL-YEAGREKVA 359
R+ + A+E+++ + R R + +G+E FK F+ WP N+ E GR KVA
Sbjct: 304 RKAASAAVEEFIATQNRPKTTRVTRVIQGYENHTFKSKFESWPVNSAGSAGAEEGRGKVA 363
Query: 360 AIFKHQGYDV-------TEIPEDKPRHFISCNGSLKVWLVDNGSVTLLCTEEQEQLYNGD 412
A+ K QG D+ + E+ P + +G L+V+ V+ + T L EE + Y+GD
Sbjct: 364 ALLKQQGVDIKGASKSSAPVDEEVP-PLLEGDGKLEVYCVNGSAKTALPKEELGKFYSGD 422
Query: 413 CYIIRYSYIEDGKDYHLFFA-WSGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEGRE 471
CYI+ Y+Y K + W G +SI ED+ A + + +S+KG ++ ++++G+E
Sbjct: 423 CYIVLYTYHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQGKE 482
Query: 472 PEMFFLVFKSLIIFKGGRSMAYKNFVSQRSDANGWYQKNGVALFRVQGLKHDCIRAIQVD 531
P F +F+ ++I KGG S Y+ FV ++ + Y +G+ALFR+ G + +QVD
Sbjct: 483 PPQFIALFQPMVILKGGISSGYQKFVEEKGLKDETYSGDGIALFRISGTSIHNNKVLQVD 542
Query: 532 LAASSLNSSHCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEPDR 591
+S+L+ + C++LQ+G S FTW+G+ SS ++ + L P +EG+E
Sbjct: 543 AVSSNLSPTDCFVLQSGNSMFTWIGNASSYEQQQWAAKVAEFLKPGVAVKHCKEGTESSA 602
Query: 592 FWEALGGRSEYLREKQVKDWPADPHLYTCHFEQGLFKAKEVFSFSQDDLVTEEILILDCV 651
FW ALGG+ Y D +PHLYT G + E+F+FSQDDL+TE++++LD
Sbjct: 603 FWFALGGKQNYTSRNATHDVVREPHLYTFSLRNGKLEVTEIFNFSQDDLLTEDMMVLDTH 662
Query: 652 EELHIWVGHQSGVLSKEQALDIGKMFLQAGIHQDGRRPIDTTMYIVTEGDEPRFFTSFFN 711
E+ +W+G K++A +IG+ + + + P D +Y V EG+EP FF ++F+
Sbjct: 663 GEVFVWMGQCVDAKEKQKAFEIGQKYAEHAAAFESLSP-DVPLYKVVEGNEPCFFRTYFS 721
Query: 712 WDYSKQTMLGNSFERKLAILKGI 734
WD ++ + GNSF++KL++L G+
Sbjct: 722 WDNTRSVIHGNSFQKKLSLLFGM 744
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 26,146,096
Number of extensions: 1069716
Number of successful extensions: 2054
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1978
Number of HSP's successfully gapped: 5
Length of query: 849
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 740
Effective length of database: 11,344,475
Effective search space: 8394911500
Effective search space used: 8394911500
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)