Os06g0659300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Actin filament bundling protein P-115-ABP.
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Os06g0659300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Actin filament bundling protein P-115-ABP.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.59 | 0.247 | 10.3 | -0.569 | 0.83 | -0.311 | 0.0849 | 0.523 | 0.231 | 12.4 | 20 | 48 | -- | -- |
| 28.29 | 0.25 | 10.3 | -0.461 | 0.803 | -0.329 | -0.173 | -- | 0.242 | 12.3 | 20.7 | 50 | -- | -- |
| 27.62 | 0.245 | 10.3 | -0.561 | 0.829 | -0.313 | -- | 0.492 | 0.233 | 12.4 | 19.96 | 45 | -- | -- |
| 28.42 | 0.25 | 10.3 | -0.467 | 0.805 | -0.326 | -- | -- | 0.242 | 12.3 | 20.78 | 50 | -- | -- |
| 64.04 | 0.373 | 10.3 | -0.635 | -- | -0.541 | -- | 0.318 | 0.127 | -- | 22.2 | 10 | -- | -- |
| 33.22 | 0.27 | 10.3 | -0.386 | 0.895 | -- | -0.11 | -- | 0.311 | 12.4 | -- | -- | -- | -- |
| 33.27 | 0.27 | 10.3 | -0.39 | 0.895 | -- | -- | -- | 0.31 | 12.4 | -- | -- | -- | -- |
| 63.56 | 0.371 | 10.3 | -0.593 | -- | -0.595 | -- | -- | 0.124 | -- | 21.6 | 13 | -- | -- |
| 33.99 | 0.273 | 10.3 | -- | 0.828 | -0.264 | -- | -- | 0.305 | 12.4 | 20.78 | 50 | -- | -- |
| 83.6 | 0.427 | 10.3 | -0.421 | -- | -- | -- | -- | 0.296 | -- | -- | -- | -- | -- |
| 37.28 | 0.286 | 10.2 | -- | 0.901 | -- | -- | -- | 0.354 | 12.4 | -- | -- | -- | -- |
| 72.58 | 0.398 | 10.3 | -- | -- | -0.505 | -- | -- | 0.228 | -- | 21.6 | 11 | -- | -- |
| 88.27 | 0.439 | 10.3 | -- | -- | -- | -- | -- | 0.342 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 8 | 26.39 | temperature | 20 | 90 | > th | dose independent | rect. | 12 | 23 |
| 9 | 26.40 | temperature | 20 | 90 | > th | dose independent | rect. | 12 | 21 |
| 72 | 27.07 | temperature | 20 | 90 | > th | dose independent | rect. | 4 | 14 |
| 74 | 27.08 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 23 |
| 83 | 27.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 93 | 27.20 | temperature | 15 | 10 | > th | dose dependent | rect. | 12 | 22 |
| 110 | 27.31 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 12 |
| 115 | 27.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 134 | 27.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 135 | 27.41 | temperature | 20 | 90 | < th | dose independent | sin | 19 | NA |
| 144 | 27.46 | temperature | 20 | 30 | > th | dose independent | rect. | 23 | 23 |
| 155 | 27.50 | temperature | 25 | 270 | < th | dose dependent | sin | 20 | NA |
| 181 | 27.56 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 22 |
| 183 | 27.56 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 23 |
| 184 | 27.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 185 | 27.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 197 | 27.59 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 209 | 27.61 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 22 |
| 210 | 27.61 | temperature | 20 | 30 | < th | dose independent | rect. | 14 | 23 |
| 224 | 27.62 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 228 | 27.62 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 233 | 27.63 | temperature | 20 | 30 | > th | dose independent | rect. | 21 | 23 |
| 234 | 27.63 | temperature | 20 | 30 | < th | dose independent | rect. | 1 | 23 |
| 235 | 27.63 | temperature | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 240 | 27.63 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 250 | 27.63 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 254 | 27.63 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 255 | 27.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 257 | 27.64 | temperature | 20 | 30 | < th | dose independent | no | NA | NA |
| 261 | 27.64 | temperature | 20 | 30 | < th | dose independent | rect. | 9 | 23 |
| 262 | 27.64 | temperature | 20 | 30 | < th | dose independent | rect. | 11 | 23 |
| 263 | 27.64 | temperature | 20 | 30 | < th | dose independent | rect. | 23 | 23 |
| 271 | 27.64 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 281 | 27.65 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 284 | 27.66 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 23 |
| 285 | 27.66 | temperature | 20 | 30 | < th | dose independent | rect. | 19 | 23 |
| 298 | 27.67 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 20 |
| 301 | 27.67 | temperature | 20 | 30 | < th | dose independent | rect. | 21 | 23 |
| 310 | 27.67 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 324 | 27.69 | temperature | 20 | 30 | > th | dose independent | no | NA | NA |
| 326 | 27.69 | temperature | 20 | 90 | < th | dose independent | rect. | 9 | 20 |
| 331 | 27.69 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 362 | 27.73 | radiation | 1 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 363 | 27.73 | temperature | 20 | 90 | < th | dose independent | rect. | 9 | 18 |
| 394 | 27.75 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 19 |
| 420 | 27.77 | radiation | 1 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 427 | 27.77 | radiation | 1 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 460 | 27.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 561 | 27.90 | temperature | 20 | 10 | < th | dose independent | rect. | 9 | 19 |
| 566 | 27.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 581 | 27.91 | radiation | 1 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 699 | 27.98 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 716 | 27.99 | temperature | 20 | 90 | > th | dose independent | sin | 21 | NA |
| 742 | 28.00 | temperature | 20 | 1440 | < th | dose dependent | sin | 8 | NA |
| 755 | 28.01 | temperature | 25 | 1440 | < th | dose dependent | sin | 5 | NA |
| 810 | 28.04 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 21 |
| 842 | 28.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 855 | 28.05 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 934 | 28.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 935 | 28.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 973 | 28.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 8 |