Os08g0240800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Actin filament bundling protein P-115-ABP.
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Os08g0240800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Actin filament bundling protein P-115-ABP.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.29 | 0.19 | 9.29 | 0.072 | 0.489 | 0.221 | -0.357 | 1.16 | 0.11 | 5.02 | 12.67 | 9 | -- | -- |
| 16.8 | 0.191 | 9.31 | -0.0863 | 0.511 | 0.249 | -0.588 | -- | 0.0647 | 4.84 | 23.7 | 10 | -- | -- |
| 16.55 | 0.191 | 9.29 | 0.102 | 0.49 | 0.232 | -- | 1.39 | 0.119 | 5.04 | 12.12 | 6 | -- | -- |
| 17.58 | 0.195 | 9.31 | -0.0834 | 0.521 | 0.277 | -- | -- | 0.072 | 4.95 | 24.51 | 12 | -- | -- |
| 26.22 | 0.238 | 9.27 | 0.23 | -- | -0.282 | -- | 1.08 | 0.197 | -- | 17.69 | 264 | -- | -- |
| 17.85 | 0.198 | 9.3 | -0.0396 | 0.431 | -- | -0.624 | -- | 0.099 | 5.15 | -- | -- | -- | -- |
| 18.76 | 0.203 | 9.3 | -0.0387 | 0.43 | -- | -- | -- | 0.102 | 5.45 | -- | -- | -- | -- |
| 27.2 | 0.243 | 9.3 | 0.0329 | -- | -0.284 | -- | -- | 0.151 | -- | 14.2 | 294 | -- | -- |
| 17.76 | 0.196 | 9.3 | -- | 0.513 | 0.257 | -- | -- | 0.0835 | 4.98 | 24.6 | 12 | -- | -- |
| 28.4 | 0.249 | 9.31 | -0.0243 | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
| 18.8 | 0.203 | 9.3 | -- | 0.43 | -- | -- | -- | 0.107 | 5.46 | -- | -- | -- | -- |
| 26.97 | 0.242 | 9.3 | -- | -- | -0.221 | -- | -- | 0.132 | -- | 24.46 | 326 | -- | -- |
| 28.41 | 0.249 | 9.31 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.55 | radiation | 30.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 3 | 15.59 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 18 |
| 10 | 15.69 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 7 |
| 17 | 15.73 | humidity | 60.0 | 30 | > th | dose independent | rect. | 4 | 7 |
| 20 | 15.75 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 17 |
| 23 | 15.76 | temperature | 15.0 | 30 | > th | dose independent | rect. | 11 | 17 |
| 24 | 15.76 | wind | 5.0 | 270 | < th | dose dependent | rect. | 3 | 5 |
| 27 | 15.77 | wind | 7.0 | 30 | < th | dose independent | rect. | 4 | 7 |
| 28 | 15.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 7 |
| 30 | 15.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 7 |
| 32 | 15.78 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 7 |
| 35 | 15.78 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 7 |
| 36 | 15.78 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 7 |
| 43 | 15.80 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 17 |
| 46 | 15.80 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 19 |
| 47 | 15.80 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 48 | 15.80 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 52 | 15.81 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 66 | 15.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 19 |
| 70 | 15.85 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 17 |
| 71 | 15.85 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 17 |
| 76 | 15.87 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 83 | 15.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 5 |
| 84 | 15.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 5 |
| 97 | 15.92 | radiation | 1.0 | 10 | > th | dose dependent | sin | 11 | NA |
| 100 | 15.92 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 103 | 15.92 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 114 | 15.94 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 117 | 15.94 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 118 | 15.94 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 17 |
| 132 | 15.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 134 | 15.95 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 135 | 15.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 137 | 15.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 138 | 15.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 139 | 15.95 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 141 | 15.95 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 17 |
| 142 | 15.95 | humidity | 50.0 | 30 | > th | dose independent | rect. | 11 | 17 |
| 182 | 15.99 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 7 |
| 193 | 16.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 220 | 16.02 | radiation | 10.0 | 10 | < th | dose independent | sin | 11 | NA |
| 240 | 16.03 | radiation | 10.0 | 10 | > th | dose independent | sin | 11 | NA |
| 243 | 16.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 19 |
| 254 | 16.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 261 | 16.04 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 10 |
| 278 | 16.05 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 19 |
| 279 | 16.05 | radiation | 10.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 294 | 16.06 | radiation | 1.0 | 10 | > th | dose independent | rect. | 18 | 17 |
| 307 | 16.07 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 6 |
| 310 | 16.07 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 9 |
| 347 | 16.08 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 17 |
| 364 | 16.09 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 399 | 16.11 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 7 |
| 402 | 16.11 | temperature | 20.0 | 30 | > th | dose independent | rect. | 24 | 12 |
| 448 | 16.12 | wind | 9.0 | 10 | < th | dose dependent | rect. | 11 | 17 |
| 524 | 16.14 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 11 | 17 |
| 535 | 16.15 | temperature | 25.0 | 720 | < th | dose independent | rect. | 6 | 5 |
| 552 | 16.15 | radiation | 1.0 | 10 | > th | dose independent | rect. | 14 | 21 |
| 559 | 16.15 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 7 |
| 567 | 16.15 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 20 | 19 |
| 570 | 16.16 | temperature | 25.0 | 720 | < th | dose independent | rect. | 7 | 3 |
| 571 | 16.16 | radiation | 10.0 | 10 | > th | dose independent | rect. | 7 | 4 |
| 658 | 16.18 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 24 | 17 |
| 662 | 16.18 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 711 | 16.19 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 19 |
| 732 | 16.20 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 4 |
| 737 | 16.20 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 7 |
| 742 | 16.20 | temperature | 25.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 746 | 16.20 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 755 | 16.20 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 768 | 16.21 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 10 |
| 769 | 16.21 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 14 |
| 794 | 16.21 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 798 | 16.22 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 12 |
| 799 | 16.22 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 14 |
| 805 | 16.22 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 5 |
| 821 | 16.23 | radiation | 10.0 | 90 | < th | dose independent | sin | 11 | NA |
| 836 | 16.23 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 846 | 16.23 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 13 |
| 858 | 16.24 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 10 | 5 |
| 862 | 16.24 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 11 |
| 887 | 16.24 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 22 |
| 894 | 16.25 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 904 | 16.25 | humidity | 80.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 921 | 16.25 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 7 |
| 937 | 16.25 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 960 | 16.26 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 962 | 16.26 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 968 | 16.26 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 17 |
| 974 | 16.26 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 23 |