BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0116600 Os05g0116600|AK109828
(475 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0116600 F-box associated type 1 domain containing protein 905 0.0
Os05g0116200 660 0.0
Os09g0563500 476 e-134
Os05g0116300 466 e-131
Os10g0507366 260 1e-69
Os01g0904900 171 2e-42
Os02g0563800 Cyclin-like F-box domain containing protein 166 5e-41
Os07g0269800 Cyclin-like F-box domain containing protein 137 2e-32
Os07g0268000 Cyclin-like F-box domain containing protein 136 4e-32
Os10g0484600 103 3e-22
Os12g0618150 96 7e-20
Os05g0303900 94 2e-19
Os04g0589300 90 3e-18
Os10g0484200 69 6e-12
>Os05g0116600 F-box associated type 1 domain containing protein
Length = 475
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/475 (94%), Positives = 448/475 (94%)
Query: 1 MASDDSSPPDAKRLRRSPPTSTSPDHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTDHF 60
MASDDSSPPDAKRLRRSPPTSTSPDHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTDHF
Sbjct: 1 MASDDSSPPDAKRLRRSPPTSTSPDHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTDHF 60
Query: 61 ILXXXXXXXXXXXPELLFFAPPDHRNTTTFYACSLRGCEPPAAARELLTIDYFSAKHAVM 120
IL PELLFFAPPDHRNTTTFYACSLRGCEPPAAARELLTIDYFSAKHAVM
Sbjct: 61 ILAHRARAAAARHPELLFFAPPDHRNTTTFYACSLRGCEPPAAARELLTIDYFSAKHAVM 120
Query: 121 SPTPCRGLTLVSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSM 180
SPTPCRGLTLVSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSM
Sbjct: 121 SPTPCRGLTLVSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSM 180
Query: 181 TPWRPFELSTTGLGFDTATDEHKVVRLFKRRNGEHACEVYTLGKPGGWRPCAGRVPASAA 240
TPWRPFELSTTGLGFDTATDEHKVVRLFKRRNGEHACEVYTLGKPGGWRPCAGRVPASAA
Sbjct: 181 TPWRPFELSTTGLGFDTATDEHKVVRLFKRRNGEHACEVYTLGKPGGWRPCAGRVPASAA 240
Query: 241 SILPAMPPVFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPPRLSSRMCHLAN 300
SILPAMPPVFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPPRLSSRMCHLAN
Sbjct: 241 SILPAMPPVFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPPRLSSRMCHLAN 300
Query: 301 LDGSLCAVFDYRGAGGVYGLFTCXXXXXXXXXXXXXXXXIYLNRLPREVSDELMEERVIV 360
LDGSLCAVFDYRGAGGVYGLFTC IYLNRLPREVSDELMEERVIV
Sbjct: 301 LDGSLCAVFDYRGAGGVYGLFTCSEPSASPSPSWSVRCSIYLNRLPREVSDELMEERVIV 360
Query: 361 PLCTAGGRILLATGRHEVFAYDAGRNAVERVFRMQEFVDVPNDCREARLLLSVGLHDECI 420
PLCTAGGRILLATGRHEVFAYDAGRNAVERVFRMQEFVDVPNDCREARLLLSVGLHDECI
Sbjct: 361 PLCTAGGRILLATGRHEVFAYDAGRNAVERVFRMQEFVDVPNDCREARLLLSVGLHDECI 420
Query: 421 ADLHPGAGGERMLFVNTGRRGNTVVKREVPVEYHDDSDRRFNVFFKDLATMAAQI 475
ADLHPGAGGERMLFVNTGRRGNTVVKREVPVEYHDDSDRRFNVFFKDLATMAAQI
Sbjct: 421 ADLHPGAGGERMLFVNTGRRGNTVVKREVPVEYHDDSDRRFNVFFKDLATMAAQI 475
>Os05g0116200
Length = 507
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/395 (83%), Positives = 347/395 (87%), Gaps = 2/395 (0%)
Query: 80 APPDHRNTTTFYACSLRGCEPPAAARELLTIDYFSAKHAVMSPTPCRGLTLVSDGRAPRY 139
+PPDHRNTTTFYACSLRG E PAAARELLTIDYFSAKHAV SPTPCR LTLVS GRAPRY
Sbjct: 109 SPPDHRNTTTFYACSLRGGEAPAAARELLTIDYFSAKHAVTSPTPCRCLTLVSVGRAPRY 168
Query: 140 YLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSMTPWRPFELSTTGLGFDTAT 199
+LLNLSTGDH+ALPPCQPAAKAHPDPLAWLPRGTT+YLPSMTPWRPFELSTTGLGF TAT
Sbjct: 169 HLLNLSTGDHLALPPCQPAAKAHPDPLAWLPRGTTNYLPSMTPWRPFELSTTGLGF-TAT 227
Query: 200 DEHKVVRLFKRRNGEHACEVYTLGKPGGWRPCAGRVPASAASILPAMPPVFVNGYLYWLL 259
EHKVVRLFKR NGEHACEVYTLGKPGGWRPCAGRVPASAASILPAMPPVFVNGYLYWLL
Sbjct: 228 GEHKVVRLFKRLNGEHACEVYTLGKPGGWRPCAGRVPASAASILPAMPPVFVNGYLYWLL 287
Query: 260 QPAAPGDEQIRRILSFSIGAEQFGSVYVPPRLSSRMCHLANLDGSLCAVFDYRGAGGVYG 319
QPAAPGDEQIRRILSFSIGAEQFGSVYVPPRLSSRMCHLANLDGSLCAVFD R G VYG
Sbjct: 288 QPAAPGDEQIRRILSFSIGAEQFGSVYVPPRLSSRMCHLANLDGSLCAVFDNRVEGDVYG 347
Query: 320 LFTCXXXXXXXXXXXXXXXXIYLNRLPREVSDELMEERVIVPLCTAGGRILLATGRHEVF 379
LFTC IYLNRLPREVSDELMEERVIVPLCTAGG+ILLATG H+VF
Sbjct: 348 LFTCSEPSASPSPSWSVRCSIYLNRLPREVSDELMEERVIVPLCTAGGKILLATGHHKVF 407
Query: 380 AYDAGRNAVERVFRMQEFVDVPNDCREARLLLSVGLHDECIADLHPG-AGGERMLFVNTG 438
AYDA RN VERVFRMQEFVD+ +D +A LL+++GLHDECIAD+H G GGERML VN G
Sbjct: 408 AYDAERNTVERVFRMQEFVDLRHDYIKAPLLINIGLHDECIADVHNGDGGGERMLRVNMG 467
Query: 439 RRGNTVVKREVPVEYHDDSDRRFNVFFKDLATMAA 473
RR N VVK+EV VEYHD S+R+FNV KDL +AA
Sbjct: 468 RRDNMVVKQEVAVEYHDASNRQFNVLLKDLKRIAA 502
>Os09g0563500
Length = 472
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 286/468 (61%), Positives = 322/468 (68%), Gaps = 29/468 (6%)
Query: 5 DSSPPDAKRLRRSPPTSTSP----DHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTDHF 60
+SSPP KRLRRS ++ LLVDEILTRLPIAAAVR RAV R WNAALT+DHF
Sbjct: 2 ESSPPLHKRLRRSSESNGERRPPRGELLVDEILTRLPIAAAVRFRAVCRQWNAALTSDHF 61
Query: 61 ILXXXXXXXXXXX--PELLFFAPPD---HRNTTTFYACSLRG--CEPPAAA---RELLTI 110
IL PELLFFAP T+FYACSLR CE P RELLT+
Sbjct: 62 ILAHRARAAAARHRHPELLFFAPGAAFAGGRATSFYACSLRDGDCEAPPPPAAARELLTV 121
Query: 111 DYFSAKHAVMSPTPCRGLTLVSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLP 170
+A HAV+SPTPCRGLTL+ D YYL NLSTGDHVALPPCQPAA A+ D LP
Sbjct: 122 AGITAAHAVLSPTPCRGLTLIFDTYRSEYYLFNLSTGDHVALPPCQPAAAANLDSTLTLP 181
Query: 171 R-GTTSYLPSM-TPWRPFELSTTGLGFDTATDEHKVVRLFKRRNG-EHACEVYTLGKPGG 227
TSY P+ PW ELSTTGLG+DTAT EHKVVRLFKRR+G E++CEVYT G GG
Sbjct: 182 TMNPTSYPPAWPAPW--IELSTTGLGYDTATGEHKVVRLFKRRDGGEYSCEVYTQGA-GG 238
Query: 228 WRPCAGRVPASAASILPAMPPVFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYV 287
WR GRVP AA++LPA+PPVFV+GYLYWLL+PA PG+E I R+LSFSIG EQFG VYV
Sbjct: 239 WRRGVGRVPPCAANLLPALPPVFVDGYLYWLLRPAGPGEEPIHRVLSFSIGGEQFGWVYV 298
Query: 288 PPRLSSRMCHLANLDGSLCAVFDYRGAGGVYGLFTCXXXXXXXXXXXXXXXXIYLNRLPR 347
PPRLSSR+CHLA+LDGSLCAV+D R G VYGLFT I L LP
Sbjct: 299 PPRLSSRICHLADLDGSLCAVYDNRLFGRVYGLFTWSGRSSSPSPSWSVRCSINLQILPE 358
Query: 348 EVSDELMEERVIVPLCTAGG----RILLATGRHEVFAYDAGRNAVERVFRMQEFVDVPND 403
+VS+EL ERVIVPLC+AGG +I+LATG H+VF YD RNAVERVFRMQ+ V VP
Sbjct: 359 QVSEELAGERVIVPLCSAGGAGSSKIMLATGGHKVFVYDVERNAVERVFRMQDMVAVPRG 418
Query: 404 CREARLLLSVGLHDECIADL---HPGAG-GERMLFVNTG-RRGNTVVK 446
+A LLLSVGLHDE IAD+ GAG GER L V G RR +T+VK
Sbjct: 419 YLQAPLLLSVGLHDERIADVVHRRAGAGDGERRLKVKLGRRRDSTLVK 466
>Os05g0116300
Length = 313
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/322 (77%), Positives = 268/322 (83%), Gaps = 16/322 (4%)
Query: 1 MASDDSSPPDAKRLRRSPPTSTSP--DHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTD 58
MAS+DSSPPDAKRLRRSPP+ +S DHLLVDEILTRLPIAAAVRLRAVSRDWNAALT+D
Sbjct: 1 MASNDSSPPDAKRLRRSPPSPSSSSPDHLLVDEILTRLPIAAAVRLRAVSRDWNAALTSD 60
Query: 59 HFILXXXXXXXXXXX-PELLFFAPPDHR---NTTTFYACSLRGCEPPAAARELLTIDYFS 114
+FIL PELLFFAPP+ R +TTTFYACSLRG E PAAARELLTID FS
Sbjct: 61 YFILAHRARAAAARRHPELLFFAPPEPRRTSSTTTFYACSLRGGEAPAAARELLTIDCFS 120
Query: 115 AKHAVMSPTPCRGLTLVSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLA-WLPRGT 173
AKHAV SP PCRGLTLVSDGR PRY+LLNLSTGDHV LPPCQPAA+ H +P+A LP G
Sbjct: 121 AKHAVTSPRPCRGLTLVSDGREPRYHLLNLSTGDHVTLPPCQPAAELHSEPIARVLPGGI 180
Query: 174 TSYLPSMTPWRPFELSTTGLGFDTATDEHKVVRLFKRRNGEHACEVYTLGKPGGWRPCAG 233
TSYLPSM+PW PFELSTTGLGFD AT EHKVVRLFK+RNGEH PGGWRPC G
Sbjct: 181 TSYLPSMSPWDPFELSTTGLGFDAATGEHKVVRLFKKRNGEH---------PGGWRPCTG 231
Query: 234 RVPASAASILPAMPPVFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPPRLSS 293
RVPASAA+ LP +PPVFVNGYLYWLLQPAAPGD QIRRILSFS+GAEQFGSVY+PPRLSS
Sbjct: 232 RVPASAANFLPGLPPVFVNGYLYWLLQPAAPGDWQIRRILSFSVGAEQFGSVYMPPRLSS 291
Query: 294 RMCHLANLDGSLCAVFDYRGAG 315
RM HL NLDGSLCAVFD R G
Sbjct: 292 RMRHLTNLDGSLCAVFDNRVEG 313
>Os10g0507366
Length = 487
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/416 (41%), Positives = 223/416 (53%), Gaps = 41/416 (9%)
Query: 24 PDHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTDHFILXXXXXXXXX--XXPELLFFAP 81
PD L+V IL R+P AA VRLRAV R W AALT+DHF+ PE++FFAP
Sbjct: 27 PDDLVVGHILARVPAAAVVRLRAVCRAWRAALTSDHFVRVRRALRTATDDGRPEIVFFAP 86
Query: 82 PDHRNTTT--FYACSLRG-CEPPAAARELLTIDYFSAKH--AVMSPTPCRGLTLVSDGRA 136
+ T FY C L +AAREL+T+ A+ V++ PC GLTL+ +
Sbjct: 87 AAAGGSATAAFYTCKLASDGSGSSAARELVTVGNLPAEDDLVVLTTKPCNGLTLLFQASS 146
Query: 137 PRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSMTPWRPFELSTTGLGFD 196
YY+ NLSTG+HV+LPP AAK PDP G +S TGLGFD
Sbjct: 147 SEYYVCNLSTGEHVSLPPYAAAAK--PDPYDDGAYGRSS---------------TGLGFD 189
Query: 197 TATDEHKVVRLFK--RRNGEHACEVYTLGKPGGWRPCAGRVPASAASILPAMPPVFVNGY 254
A EHKVVRL++ + G+ CE+Y+L GGWRP AGRVP L PVF++G
Sbjct: 190 PAAGEHKVVRLYEEEKERGQERCEMYSLVSGGGWRPSAGRVPPGVTRCLEGRSPVFLDGC 249
Query: 255 LYWLLQPAAPGDEQ---------IRRILSFSIGAEQFGSVYVPPRLSSRMCHLANLDGSL 305
YW + A G + +R ILS S+ EQFG + P L+ + HLA LDGSL
Sbjct: 250 FYWHMDTARLGAVEASILLGSPPVRVILSLSLATEQFGWIPTPEELAREVSHLAELDGSL 309
Query: 306 CAVFDYRGAGGVYGLFTCXXXXXXXXXXXXXXX--XIYLNRLPREVSDELMEERVIVPLC 363
CAV D R Y L+T I L L R + DEL ++PLC
Sbjct: 310 CAVVDLRLVAEEYELWTWSGAAAPSSPSASWSRRCRISLTSLERPMRDELGLGLRVLPLC 369
Query: 364 TA-GGRILLATGRHEVFAYDAGRNAVERVFRMQEFVDVPNDCREARLLLSVGLHDE 418
T+ G++LLAT RH+V+AYDAG N V+ VF M +VDVP E L+L++ LH+E
Sbjct: 370 TSPDGKVLLATSRHKVYAYDAGSNRVDTVFSMHHWVDVPV---EPALMLNIALHEE 422
>Os01g0904900
Length = 160
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/119 (73%), Positives = 99/119 (83%), Gaps = 5/119 (4%)
Query: 174 TSYLP-SMTPWRPFELSTTGLGFDTATDEHKVVRLFKRRNG-EHACEVYTLGKPGGWRPC 231
TSYLP S PW ELSTTGLG++TAT EHKVVRLFK+RNG E++CEVYT G GGWR C
Sbjct: 4 TSYLPASAAPW--IELSTTGLGYNTATGEHKVVRLFKKRNGGEYSCEVYTQGA-GGWRRC 60
Query: 232 AGRVPASAASILPAMPPVFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPPR 290
GRVP AA+ LPA+PPVFV+GYLYWLL+PA PG+E I RILSFS+GAEQFG VYVPPR
Sbjct: 61 VGRVPPCAANFLPALPPVFVHGYLYWLLRPAGPGEEPIHRILSFSMGAEQFGWVYVPPR 119
>Os02g0563800 Cyclin-like F-box domain containing protein
Length = 883
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 200/442 (45%), Gaps = 67/442 (15%)
Query: 9 PDAKRLRRSPPTSTSPDHLLVDEILT----RLPIAAAVRLRAVSRDWNAALTTDHF-ILX 63
P +KR RR S +L DE+LT RLP+ + +R RA R W+A L+++ F L
Sbjct: 21 PGSKRRRRKSVPSRHAAAMLPDELLTEVCLRLPVKSILRFRAACRSWDAMLSSEEFGQLY 80
Query: 64 XXXXXXXXXXPELLFFAPPDHRNTTTFYACSLRGCEPPAAARELLTIDYFSAKHAVMSPT 123
P+LLF +P + N+T Y CS LLT+D + ++P
Sbjct: 81 AARAEEMSSAPKLLFVSPTANFNSTAVYKCS----PSKPTDDLLLTLDDVRGNYVEVTPA 136
Query: 124 PCRGLTLVSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSMTPW 183
PC GL+L+ DG AP YY++N +T LPP +
Sbjct: 137 PCHGLSLLYDGIAPAYYVMNATTRAVTRLPP----------------------------F 168
Query: 184 RPFELSTTGLGFDTATDEHKVVRLFKRRNGEH---ACEVYTLGKPGG--WRPCAGRVP-- 236
R +T GLG D T ++KVVRLF+ E CE+YTLG G WRP AG VP
Sbjct: 169 RDVAFATAGLGCDARTKKYKVVRLFEGNLLEKEFLKCEIYTLGGDEGDIWRPAAGGVPFR 228
Query: 237 -------ASAASILPAMPPVFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPP 289
A + +++ + P+F NGYL+WL+ P ILSFS+ E F + PP
Sbjct: 229 FYSFARSAISNAVMNKLQPLFFNGYLHWLINPLHHVKLPRASILSFSLTDETFRWIRSPP 288
Query: 290 RLSSRMCHLANLDGSLCAVFDYRGAGGVYGLFTCXXXXXXXXXXXXXXXXIYLN-RLPRE 348
++S + HL LDG+LC V D R I L +LPR
Sbjct: 289 FVASGV-HLVELDGNLCMVRDLRDRSTAVCKLEIWKLKDYNSGDWSLDHRIDLTGQLPR- 346
Query: 349 VSDELMEERVIVPL-----CTAGGRILLATGRHEVFAYDAGRNAVERVFRMQEF-VDVPN 402
+L+E +++ + C +G +I++AT +H+V +YD +E + + E N
Sbjct: 347 ---DLLEPQIVKVIGSAGSCRSGTKIIIATSKHKVCSYDPVSRTLETITSISETCTSYQN 403
Query: 403 DCREARLLLSVGLHDECIADLH 424
+ + R L EC+ +H
Sbjct: 404 EKSDIRF----SLFKECLTPVH 421
>Os07g0269800 Cyclin-like F-box domain containing protein
Length = 754
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 155/333 (46%), Gaps = 73/333 (21%)
Query: 12 KRLRRSPPTSTS---PDHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTDHFILXXXXXX 68
KR + SP + + P+ +++ E+L LP+ + +R RAV R W AL++D F
Sbjct: 7 KRRKVSPASGATVVLPEEMMI-EVLQWLPVESVLRFRAVCRSWATALSSDQFRGFHTAKN 65
Query: 69 XXXXXPELLFFAPPDHRNTTTFYACSLRGCEPPAAA-------RELL-TIDYFSAKHAVM 120
P LFF T F + S+ P + + R+LL +D M
Sbjct: 66 KIKPLPPKLFFV----SQTAGFGSTSVHTSSPLSRSVPGGDNHRDLLFNLDNVRGDFMAM 121
Query: 121 SPTPCRGLTLVSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSM 180
+PTPC GLTL+ D YY+LN +T LPPCQ +P G
Sbjct: 122 TPTPCHGLTLLHDAMGLEYYVLNAATRSISRLPPCQT-----------VPSG-------- 162
Query: 181 TPWRPFELSTTGLGFDTATDEHKVVRLFKR-RNGE--HACEVYTLGKPGG--WRPCAGRV 235
+ GLGFD T E+KVVRLF+ +GE C++YTLG G WRP +G V
Sbjct: 163 ---------SAGLGFDARTGEYKVVRLFREIISGEPHTKCQIYTLGGKHGDSWRPASGGV 213
Query: 236 P---------ASAASILPAMPPVFVNGYLYWL-------LQPAAPGDEQIRRILSFSIGA 279
P + +AS + PVFV+G+L+WL L+P A ILSFS+
Sbjct: 214 PFKFRTAGTYSISASQQHKLLPVFVDGFLHWLTGSLFSFLRPHAA-------ILSFSVTE 266
Query: 280 EQFGSVYVPPRLSSRMCHLANLDGSLCAVFDYR 312
E F V PP S + HL +L G+LC V D R
Sbjct: 267 ETFRLVRSPPFQVSGV-HLVDLSGNLCMVRDLR 298
>Os07g0268000 Cyclin-like F-box domain containing protein
Length = 738
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 183/420 (43%), Gaps = 84/420 (20%)
Query: 15 RRSPPTSTSPDHL---LVDEILTRLPIAAAVRLRAVSRDWNAALTTDHFILXXXXXXXXX 71
R+ P S +P L ++ E+L LP+ + + RAV R W AL++D F
Sbjct: 9 RKVSPASGAPVVLPEEMMIEVLQWLPVESVLCFRAVCRSWATALSSDQFRGFHTAKNKIK 68
Query: 72 XXPELLFFAPPDHRNTTTFYACSLRGCEPPAAA-------RELL-TIDYFSAKHAVMSPT 123
P LFF T F + S+ P + + R+LL +D M+PT
Sbjct: 69 PLPPKLFFV----SQTAGFGSTSVHASSPLSRSVLGGDDHRDLLFNLDNVRGDFMAMTPT 124
Query: 124 PCRGLTLVSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSMTPW 183
PC GLTL+ D YY+LN++T LPPCQ +P G
Sbjct: 125 PCHGLTLLHDAMGLEYYVLNVATRSISRLPPCQT-----------VPSG----------- 162
Query: 184 RPFELSTTGLGFDTATDEHKVVRLFKR-RNGE--HACEVYTLGKPGG--WRPCAGRVP-- 236
+ GLGFD T E+KVVRLF+ +GE C++YTLG G WRP +G VP
Sbjct: 163 ------SAGLGFDARTGEYKVVRLFREIISGEPHTKCQIYTLGGKHGDSWRPASGGVPFK 216
Query: 237 ---ASAASILPA----MPPVFVNGYLYWL-------LQPAAPGDEQIRRILSFSIGAEQF 282
A SIL + + PVFV+G+L+WL L+P A ILSFS+ E F
Sbjct: 217 FRTAGTYSILASQQHKLLPVFVDGFLHWLTGSLFSFLRPHAA-------ILSFSVTEETF 269
Query: 283 GSVYVPPRLSSRMCHLANLDGSLCAVFDYRGAGGVYGLFTCXXXXXXXXXXXXXXXXIYL 342
V PP S + HL +L G+LC V D R ++ +
Sbjct: 270 RLVRSPPFQVSGV-HLVDLSGNLCMVRDLRRMSSTLEIWKLNDLYSSDWSLEHR-----I 323
Query: 343 NRLPREVSDELMEE---RVIVPLCTAG----GRILLATGRHEVFAYDAGRNAVERVFRMQ 395
+ V+ +LM+ RVI ++G +++AT + AYD +E + ++
Sbjct: 324 DLSTEHVARDLMKPDFIRVIGSADSSGMSGKKNVIIATSNRKAIAYDPTSETLETILEIK 383
>Os10g0484600
Length = 724
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 188/454 (41%), Gaps = 77/454 (16%)
Query: 24 PDHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTDHFILXXXXXXXXXXXPELLFFAPPD 83
P+ +L+ EI +RLP +A RLRA+SR W A L++ F+ P+ LF P D
Sbjct: 5 PEDVLL-EIFSRLPARSAARLRAMSRSWRAELSSPSFVDLHLRRANTTAPPK-LFCCPCD 62
Query: 84 HR----NTTTFYACSLRGCEPPAAARELLTIDYFSAKHAVMSPTPCRGLTLVSDGRAPRY 139
+ + Y L G REL+ F P RGL LV
Sbjct: 63 DKLMLADQWCLYDLQLGG----GPGRELVRGGEFGDVLPAPLTKPLRGLVLVMCYGRNGV 118
Query: 140 YLLNLST-GDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSMTPWRPFELSTT-GLGFDT 197
Y+ N ST G+ +ALP + +KA ++ PS+ P P+ + GLG+ +
Sbjct: 119 YVCNPSTGGEALALPDTELPSKA-------------TFRPSLGPGPPYYRNVAYGLGYCS 165
Query: 198 ATDEHKVVRLFKRRNGEHA---CEVYTLGKPGGWRPCAGRVPASAASILPAMPPVFVNGY 254
A E KVVR+F + E CEV+ L P WRP AG+ P P V
Sbjct: 166 AAKEFKVVRMFSEGHYEETATRCEVFVLDSPAYWRPAAGKPP----------PACIVENT 215
Query: 255 LYWLLQPAAPGDEQIRRILSFSIGAEQFGS----------VY--VPPRLSSRMCHLANLD 302
+L D ++SF++ E FGS VY R+ RM LD
Sbjct: 216 GVFL-------DSDGGGMVSFNVADESFGSLPAPPPLAAAVYGVADWRIRERM---TELD 265
Query: 303 GSLCAVFDYRGAGGVYG---LFTCXXXXXXXXXXXXXXXXIYLNRLPREVSDELMEERVI 359
G LC V Y +G L+ ++ +P R I
Sbjct: 266 GCLC-VCQYACGSDGHGPCRLWLLRRHGGGDETAARWEKLCCIDPIP-------WPSRSI 317
Query: 360 VPLCTAGGRILLATGRHEVFAYDA---GRNAVERVFRMQEFVDVPNDCREARLLLSVGLH 416
VPLC G +IL+ TGR VFA DA G A E +FR E + + + L ++GL+
Sbjct: 318 VPLCMYGEKILMRTGRSVVFAVDAAACGGGAPEILFRPDEHEATAGEFEDTQ-LPALGLY 376
Query: 417 DECIADLHPGAGGERMLFVNTGRRGNTVVKREVP 450
+E + + G E ++F + R + V + +P
Sbjct: 377 EESLVPV--GRTVEEIVFSSPATRAWSDVLKWLP 408
>Os12g0618150
Length = 756
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 156/388 (40%), Gaps = 50/388 (12%)
Query: 17 SPPTSTSPD-HL---LVDEILTRLPIAAAVRLRAVSRDWNAALTTDHFILXXXXXXXXXX 72
SP +S +P H+ LV++I R+P + +R R +SR W AAL+TD F+
Sbjct: 4 SPESSAAPARHIPDELVEDIFARMPARSVLRCRCLSRAWAAALSTDAFVDHHLLLANRRG 63
Query: 73 XPELLFFAPPDHRNTTTFYACSLRGCEPPAAARELLTIDYFSAKHAVMSP--TPCRGLTL 130
P+L PP + T A S P A L ++ + P PCRGL L
Sbjct: 64 GPKLCI--PPRSASADTINAWS-----PEAETTTPLMAVPHGTRNGRIIPYGRPCRGLLL 116
Query: 131 VSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSMTPWRPFE-LS 189
+ A Y++ N S G+ ALP + A DP RP E +
Sbjct: 117 LHAIFARLYFVCNPSAGEVAALPDGRMAG----DP------------------RPGEDYA 154
Query: 190 TTGLGFDTATDEHKVVRLFKRRNGEHACEVYTLG---KPGGWRPCA-GRVPASAASILPA 245
+ GLG+D T HK VRL AC VY + G WRP A G P +
Sbjct: 155 SVGLGYDARTRTHKAVRLLYHHGHPAACHVYDIAAATSTGHWRPAATGAKPPDLVHMNKL 214
Query: 246 MPPVFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPPRLSS-RMCHLANLDGS 304
V+ G+L+W+ + GD I+SFS+ AE FG V PP + + + L G
Sbjct: 215 A--VYAQGHLHWITTKSV-GDADA--IMSFSMAAEVFGRVPPPPGTTDMKGFMITELAGC 269
Query: 305 LCAVFDYRGAGGVYGLFTCXXXXXXXXXXXXXXXXIYLNRLPREVSDELMEERVIVPLCT 364
LC Y + ++ + E +D + R + PL
Sbjct: 270 LCVYPAYLSSERSLDIWLLTDYSTATWELRCRIDPT--SATSPETNDFFLVNREVTPLVL 327
Query: 365 AGG--RILLATGRHEVFAYDAGRNAVER 390
R+LL + HEV YDA + R
Sbjct: 328 TDDHRRVLLLSEEHEVAEYDAASGTLRR 355
>Os05g0303900
Length = 1196
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 157/431 (36%), Gaps = 107/431 (24%)
Query: 28 LVDEILTRLPIAAAVRLRAVSRDWNAALTTDHFI-LXXXXXXXXXXXPELLFFAPPDHRN 86
LV+EIL LP + RLR R WN +++ F+ P L P R+
Sbjct: 18 LVEEILMWLPSRSLARLRCTCRSWNELISSGGFVDRYLQNAAARHSAPAKLVLTPLSKRH 77
Query: 87 TTTFYA-CSLRGCEPPAAARELLTIDYFSAKHAVMSPTPCRGLTLVSDGRAPRYYLLNLS 145
+F+A R C AR PCRGL L A Y + N S
Sbjct: 78 ARSFHAPMCCRDCPRIIGAR------------------PCRGLVLFCRPCALTYSVCNPS 119
Query: 146 TGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSMTPWRPFELSTTGLGFDTATDEHKVV 205
TG + LPPC + W +S+ G+GFD+AT ++KVV
Sbjct: 120 TGGVLHLPPCH------------------------SEWY---MSSAGIGFDSATGKYKVV 152
Query: 206 RLFKRRNGE---HACEVYTLGK-PGGWRPCAGRV-------PASAASILPAMPPVFVNGY 254
+L + + C V T+G P GWR G A + + PVF NG
Sbjct: 153 QLVDPSSPKVVGTQCRVLTVGDDPLGWREPLGEACTILQEDHAKEGGCIADVDPVFANGR 212
Query: 255 LYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPP-------RLSSRMC----------- 296
L+W L P + + IL+FSIG E F +V +PP SS +C
Sbjct: 213 LHWTLTPKFLVCDTPQGILAFSIGDESFVTVPLPPFASADLDVCSSSVCVATNVYLEHVR 272
Query: 297 -----------------HLANLDGSLCAVFDYRGAGGV-YGLFTCXXXXXXXXXXXXXXX 338
LA LDG LC V D R + T
Sbjct: 273 PSKLLPKNKEIFAPAGTVLAELDGCLCMVRDLRHRRNMDLNETTMFEIWKLGTYETGEWS 332
Query: 339 XIYLNRLPR--EVSDELMEERVIVPLCTAGGR-----------ILLATGRHEVFAYDAGR 385
Y LPR ++ L+ +++PL GG +LLAT HE YD
Sbjct: 333 LDYRIDLPRGYRAAERLVTPWLVMPLAYVGGDPASTGGQRRKAVLLATTAHEAHVYDPEA 392
Query: 386 NAVERVFRMQE 396
+ RV M +
Sbjct: 393 AVLHRVASMSD 403
>Os04g0589300
Length = 1526
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 172/455 (37%), Gaps = 107/455 (23%)
Query: 7 SPPDAKRLRRSPPTSTSPDHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTDHFI--LXX 64
S KR RRS PD ++ EI+ RLP + VR RAVSR W A L++ F
Sbjct: 596 SSKRGKRARRSSAGQPLPDEMMT-EIVLRLPAYSIVRFRAVSRSWAAMLSSPGFQDGYAA 654
Query: 65 XXXXXXXXXPELLFFA--PPDHRNTTTFYACSLRGCE--PPAAARELLTIDYFSAKHAVM 120
+ +FFA P R T Y+C + L ID V+
Sbjct: 655 MADARRMSMSKFVFFAASPASPRGATAVYSCDVGPVRRITTTTTDLLFNIDRLRPGFLVV 714
Query: 121 SPTPCRGLTLVSDGRAPRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSM 180
S PC GLTL++D R+ Y++ N STG V P LPR
Sbjct: 715 SSRPCHGLTLLADTRSFAYWVCNSSTG--VFRP---------------LPR--------- 748
Query: 181 TPWRPFELSTTGLGFDTATDEHKVVRLFKRRNGEHACEVYTLGKPGGWRPCAGRVPASAA 240
R +LS+ GL FD T EHKVV LF C V G+
Sbjct: 749 --RRCHDLSSAGLAFDDRTKEHKVVHLF--------CHVSRGGE---------------- 782
Query: 241 SILPAMPPVFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPP--------RLS 292
+F + ++ + P +L FS+ E F V P L
Sbjct: 783 -------NLFPDTTVFENRNSSVP-------VLCFSVADEAFSLVAGPAVDGIADYCALD 828
Query: 293 SRM----CHLANLDGSLCAVFDYRGAGGVYGLFTCXXXXXXXXXXXXXXXXIYLNRLPRE 348
S HL L GSLC V D R +G +C + + +
Sbjct: 829 SHSPAVPLHLVELHGSLCMVRDLRHL--PHG-ESCLEIWALRDYSASVWSLDFRVAMTPQ 885
Query: 349 VSDELMEERVIVPLCTAGG-------------RILLATGRHEVFAYDAGRNAVERVFRMQ 395
V+ ++ + R I L GG +IL+AT +H+V AYD ++E V +
Sbjct: 886 VARDMHDPRFITVLGCLGGARGDDVGSVERIKKILIATSQHKVHAYDPATGSIETVVTVP 945
Query: 396 EFVDVPNDCREARLLLSVGLHDECIADLHPGAGGE 430
E D EA + +GL+++ +A + GGE
Sbjct: 946 E--DFAGGREEAVAGIRIGLYEDSLARV----GGE 974
>Os10g0484200
Length = 411
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 131/310 (42%), Gaps = 52/310 (16%)
Query: 24 PDHLLVDEILTRLPIAAAVRLRAVSRDWNAALTTDHFILXXXXXXXXXXXPELLFFA--P 81
PD + IL+ LP R R+VS W L++ F+ ++ F P
Sbjct: 15 PDDVFF-SILSYLPAKPVARFRSVSHSWRDMLSSAPFVQLHLRRANRPGQLKVFFHTGLP 73
Query: 82 PDHR--NTTTFYACSLRGCEPPAAARELLTIDYFSAKHAVMSPTPCRGLTLV----SDGR 135
D+ + +Y G A++L+ FS + ++ P GL L+ S GR
Sbjct: 74 VDNDLPDKHFYYTWQQDG----GPAKKLMRHG-FSGGFSRIT-KPLHGLVLLFLFHSYGR 127
Query: 136 APRYYLLNLSTGDHVALPPCQPAAKAHPDPLAWLPRGTTSYLPSMTPWRPFELSTTGLGF 195
+++LN T + LP + K + R + L + + GLG+
Sbjct: 128 G--FFVLNPCTNALLTLPDTKYPLKNN--------RHLGTNLSGKYRSPGYMYWSYGLGY 177
Query: 196 DTATDEHKVVRLFKRRNGEHA----CEVYTLGKPGGWRPCAGRVPASAASILPAM---PP 248
+AT E+KVVRLF A CEV+ L P WRP A + PA A + M PP
Sbjct: 178 CSATGEYKVVRLFSLPYDPEAAATFCEVFVLDAPAYWRPTAQQPPAPADHNVKVMVTDPP 237
Query: 249 VFVNGYLYWLLQPAAPGDEQIRRILSFSIGAEQFGSVYVPPRL---------SSRMCHLA 299
VF+NG Y+L + +++ +G E FGS PP L +S++ L
Sbjct: 238 VFLNGLFYFLCRDGL-------DVITLDVGDETFGS---PPPLPVANMALDRNSKLT-LT 286
Query: 300 NLDGSLCAVF 309
LDG LC+ +
Sbjct: 287 ELDGCLCSYY 296
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.139 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,529,088
Number of extensions: 836478
Number of successful extensions: 2384
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 2329
Number of HSP's successfully gapped: 15
Length of query: 475
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 370
Effective length of database: 11,553,331
Effective search space: 4274732470
Effective search space used: 4274732470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)