BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0538900 Os04g0538900|Os04g0538900
         (175 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os04g0538900  Glyoxalase/bleomycin resistance protein/dioxyg...   364   e-101
Os01g0173600  Glyoxalase/bleomycin resistance protein/dioxyg...   154   3e-38
Os05g0171900  Glyoxalase/bleomycin resistance protein/dioxyg...   153   5e-38
Os07g0657100  Glyoxalase/extradiol ring-cleavage dioxygenase...   150   5e-37

>Os04g0538900 Glyoxalase/bleomycin resistance protein/dioxygenase domain
           containing protein
          Length = 175

 Score =  364 bits (935), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 1   MGSEAPDPAVAASVPLVRLNHVSFQCTSVEKSVDFYRRVLGFELIKRPESLNFNGAWLYK 60
           MGSEAPDPAVAASVPLVRLNHVSFQCTSVEKSVDFYRRVLGFELIKRPESLNFNGAWLYK
Sbjct: 1   MGSEAPDPAVAASVPLVRLNHVSFQCTSVEKSVDFYRRVLGFELIKRPESLNFNGAWLYK 60

Query: 61  YGMGIHLLQRGDDADGCSIPTRPLPAINPMGNHVSFQCSDMAVMKARLRAMDREFVVRKV 120
           YGMGIHLLQRGDDADGCSIPTRPLPAINPMGNHVSFQCSDMAVMKARLRAMDREFVVRKV
Sbjct: 61  YGMGIHLLQRGDDADGCSIPTRPLPAINPMGNHVSFQCSDMAVMKARLRAMDREFVVRKV 120

Query: 121 WDGETVVDQLFFHDPDGNMIEVCNCENLPVIPLIVASTPGLPELLPPAMQTNVHG 175
           WDGETVVDQLFFHDPDGNMIEVCNCENLPVIPLIVASTPGLPELLPPAMQTNVHG
Sbjct: 121 WDGETVVDQLFFHDPDGNMIEVCNCENLPVIPLIVASTPGLPELLPPAMQTNVHG 175



>Os01g0173600 Glyoxalase/bleomycin resistance protein/dioxygenase domain
           containing protein
          Length = 215

 Score =  154 bits (389), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 97/148 (65%), Gaps = 5/148 (3%)

Query: 11  AASVPLVRLNHVSFQCTSVEKSVDFYRRVLGFELIKRPESLNFNGAWLYKYGMGIHLLQR 70
            A++PL  LNHVS  C S+  S+ FYR  LGF  ++RP S +F+GAWL+ YG+GIHLLQ 
Sbjct: 14  GAALPLSTLNHVSLVCRSLSTSLTFYRDFLGFVSVRRPGSFDFDGAWLFNYGIGIHLLQA 73

Query: 71  GDDADGCSIPTRPLPAINPMGNHVSFQCSDMAVMKARLRAMDREFVVRKVWDGETVVDQL 130
            D     S+P  P   INP  NH+SF C  M  ++ RL+ M   +V R+V +G   VDQ+
Sbjct: 74  EDPE---SMP--PNKEINPKDNHISFTCESMEAVQRRLKEMGVRYVQRRVEEGGVYVDQI 128

Query: 131 FFHDPDGNMIEVCNCENLPVIPLIVAST 158
           FFHDPDG MIE+C C+ LPV+PL  A+ 
Sbjct: 129 FFHDPDGFMIEICTCDKLPVVPLDAAAA 156



>Os05g0171900 Glyoxalase/bleomycin resistance protein/dioxygenase domain
           containing protein
          Length = 208

 Score =  153 bits (387), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 72/143 (50%), Positives = 100/143 (69%), Gaps = 5/143 (3%)

Query: 11  AASVPLVRLNHVSFQCTSVEKSVDFYRRVLGFELIKRPESLNFNGAWLYKYGMGIHLLQR 70
            + +PL  LNH+S  C S+++S+ FY  VLGF  ++RP S +F+GAWL+ YG+GIHLLQ 
Sbjct: 15  GSGLPLASLNHISIVCRSLQESLTFYTDVLGFFPVRRPGSFDFDGAWLFNYGIGIHLLQ- 73

Query: 71  GDDADGCSIPTRPLPAINPMGNHVSFQCSDMAVMKARLRAMDREFVVRKVWDGETVVDQL 130
            +D D  S+P +    INP  NH+SFQC  M  ++ RL+ +   ++ R V +G   VDQ+
Sbjct: 74  AEDPD--SLPGKT--EINPKDNHISFQCESMVAVERRLKELGIPYIQRCVEEGGIYVDQI 129

Query: 131 FFHDPDGNMIEVCNCENLPVIPL 153
           FFHDPDG MIE+CNC+NLPV+PL
Sbjct: 130 FFHDPDGFMIEICNCDNLPVVPL 152



>Os07g0657100 Glyoxalase/extradiol ring-cleavage dioxygenase domain containing
           protein
          Length = 209

 Score =  150 bits (378), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 14/146 (9%)

Query: 13  SVPLVRLNHVSFQCTSVEKSVDFYRRVLGFELIKRPESLNFNGAWLYKYGMGIHLLQRGD 72
            +PL+ LNH+S  C S++ SV FY + LGF LI RP +L+FNGAWL+ YG+GIHL+QR D
Sbjct: 44  EMPLMALNHISRLCKSIDASVRFYVKALGFVLIHRPPALDFNGAWLFNYGVGIHLVQRDD 103

Query: 73  DADGCSIPTRPLPAIN-----PMGNHVSFQCSDMAVMKARLRAMDREFVVRKVWDGE-TV 126
                    R  P +N     PM NH+SFQC DM +M+ RL  M  E++ R + + E + 
Sbjct: 104 --------ARRAPDVNPGDLDPMDNHISFQCEDMGMMEKRLNEMGIEYMKRTINEEEGSP 155

Query: 127 VDQLFFHDPDGNMIEVCNCENLPVIP 152
           +DQLFF DPDG MIE+CNCENL ++P
Sbjct: 156 IDQLFFKDPDGFMIEICNCENLELVP 181



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.322    0.139    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,909,068
Number of extensions: 293336
Number of successful extensions: 510
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 504
Number of HSP's successfully gapped: 4
Length of query: 175
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 81
Effective length of database: 12,127,685
Effective search space: 982342485
Effective search space used: 982342485
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 152 (63.2 bits)