Os01g0173600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein.
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Os01g0173600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.54 | 0.494 | 3.39 | 1.04 | 0.14 | 1.6 | 0.716 | 1.23 | 0.237 | 6.64 | 24.78 | 804 | -- | -- |
| 112.36 | 0.494 | 3.36 | 1.25 | 0.0967 | 1.47 | 0.878 | -- | 0.304 | 6.74 | 27.25 | 850 | -- | -- |
| 111.38 | 0.492 | 3.39 | 1.02 | 0.127 | 1.67 | -- | 1.46 | 0.235 | 8.28 | 24.5 | 717 | -- | -- |
| 114.1 | 0.497 | 3.36 | 1.26 | 0.0892 | 1.46 | -- | -- | 0.296 | 9.01 | 27.38 | 819 | -- | -- |
| 112.48 | 0.494 | 3.4 | 1 | -- | 1.63 | -- | 1.47 | 0.238 | -- | 25.13 | 732 | -- | -- |
| 143.48 | 0.562 | 3.43 | 0.822 | 0.37 | -- | 0.453 | -- | -0.0281 | 9.42 | -- | -- | -- | -- |
| 144.12 | 0.562 | 3.43 | 0.84 | 0.367 | -- | -- | -- | -0.0264 | 9.88 | -- | -- | -- | -- |
| 114.37 | 0.498 | 3.37 | 1.27 | -- | 1.5 | -- | -- | 0.298 | -- | 27.94 | 778 | -- | -- |
| 150.07 | 0.571 | 3.43 | -- | 0.266 | 0.848 | -- | -- | -0.00771 | 8.6 | 34.79 | 1051 | -- | -- |
| 152.17 | 0.576 | 3.44 | 0.836 | -- | -- | -- | -- | -0.0263 | -- | -- | -- | -- | -- |
| 162.72 | 0.597 | 3.45 | -- | 0.364 | -- | -- | -- | -0.12 | 9.71 | -- | -- | -- | -- |
| 151.32 | 0.573 | 3.43 | -- | -- | 1.03 | -- | -- | 0.0325 | -- | 31.2 | 740 | -- | -- |
| 170.61 | 0.61 | 3.46 | -- | -- | -- | -- | -- | -0.119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 5 | 106.13 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 6 | 106.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 7 | 106.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 10 | 106.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 17 | 106.91 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 24 | 107.31 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 38 | 107.66 | temperature | 15.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 44 | 107.74 | temperature | 30.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 186 | 109.78 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 9 |
| 194 | 109.85 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 195 | 109.85 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 212 | 110.00 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 215 | 110.01 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 220 | 110.04 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 3 | 3 |
| 234 | 110.14 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 241 | 110.16 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 248 | 110.20 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 290 | 110.36 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 17 | 12 |
| 305 | 110.40 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 306 | 110.40 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 311 | 110.42 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 319 | 110.43 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 321 | 110.43 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 476 | 110.63 | radiation | 1.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 517 | 110.66 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 18 | 20 |
| 560 | 110.72 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 600 | 110.78 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 652 | 110.84 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 654 | 110.85 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 659 | 110.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 844 | 111.15 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 859 | 111.16 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 862 | 111.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 864 | 111.17 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 895 | 111.20 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 913 | 111.22 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 951 | 111.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 972 | 111.27 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 975 | 111.27 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 6 |