BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0495800 Os04g0495800|AK103154
(936 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0495800 Similar to NIN-like protein 2 (Fragment) 1878 0.0
Os01g0236700 Plant regulator RWP-RK domain containing protein 403 e-112
Os11g0264300 Plant regulator RWP-RK domain containing protein 369 e-102
Os03g0131100 Plant regulator RWP-RK domain containing protein 309 8e-84
Os09g0549450 Hypothetical protein 130 3e-30
Os11g0615400 93 9e-19
Os02g0136000 Plant regulator RWP-RK domain containing protein 68 3e-11
>Os04g0495800 Similar to NIN-like protein 2 (Fragment)
Length = 936
Score = 1878 bits (4865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/936 (96%), Positives = 905/936 (96%)
Query: 1 MDMPTPSNRAGCNGNTGGTMGPSDDPYGAAAMNLDCYSEIYSPSVADQLFSLLNDPAAHR 60
MDMPTPSNRAGCNGNTGGTMGPSDDPYGAAAMNLDCYSEIYSPSVADQLFSLLNDPAAHR
Sbjct: 1 MDMPTPSNRAGCNGNTGGTMGPSDDPYGAAAMNLDCYSEIYSPSVADQLFSLLNDPAAHR 60
Query: 61 MFAMWPSMGSSPCAAGTSEDMPLDAYSGLGEAVEEPSQIMSVNPTEAEKTGKSSGELGSD 120
MFAMWPSMGSSPCAAGTSEDMPLDAYSGLGEAVEEPSQIMSVNPTEAEKTGKSSGELGSD
Sbjct: 61 MFAMWPSMGSSPCAAGTSEDMPLDAYSGLGEAVEEPSQIMSVNPTEAEKTGKSSGELGSD 120
Query: 121 DGAHQGSSMVPRSVVGSSLADRMLMALSLFRESLGSGALAQVWMPVEQEGHVVLSTCEQP 180
DGAHQGSSMVPRSVVGSSLADRMLMALSLFRESLGSGALAQVWMPVEQEGHVVLSTCEQP
Sbjct: 121 DGAHQGSSMVPRSVVGSSLADRMLMALSLFRESLGSGALAQVWMPVEQEGHVVLSTCEQP 180
Query: 181 FLLDQVLAGYREVSRHFVFSAKEEPGLQPGLPGRVFISGVPEWTSSVLYYNRPEYLRMEH 240
FLLDQVLAGYREVSRHFVFSAKEEPGLQPGLPGRVFISGVPEWTSSVLYYNRPEYLRMEH
Sbjct: 181 FLLDQVLAGYREVSRHFVFSAKEEPGLQPGLPGRVFISGVPEWTSSVLYYNRPEYLRMEH 240
Query: 241 ALHHEIRGSLAMPIYDPSKDSCCAVFELVTRKEKPDFSAEMDNVCNALQAMNLKATKGSS 300
ALHHEIRGSLAMPIYDPSKDSCCAVFELVTRKEKPDFSAEMDNVCNALQAMNLKATKGSS
Sbjct: 241 ALHHEIRGSLAMPIYDPSKDSCCAVFELVTRKEKPDFSAEMDNVCNALQAMNLKATKGSS 300
Query: 301 NQKFYTENQKFAFTEILDVLRAICHAHMLPLALTWVPTSNGIDGGYVVGKDGASFSQSGK 360
NQKFYTENQKFAFTEILDVLRAICHAHMLPLALTWVPTSNGIDGGYVVGKDGASFSQSGK
Sbjct: 301 NQKFYTENQKFAFTEILDVLRAICHAHMLPLALTWVPTSNGIDGGYVVGKDGASFSQSGK 360
Query: 361 TIIRIHESACYVNDGKMQGFLQACARRHLEKGQGIAGRALKSNLPFFSPDIREYSIEDYP 420
TIIRIHESACYVNDGKMQGFLQACARRHLEKGQGIAGRALKSNLPFFSPDIREYSIEDYP
Sbjct: 361 TIIRIHESACYVNDGKMQGFLQACARRHLEKGQGIAGRALKSNLPFFSPDIREYSIEDYP 420
Query: 421 LAHHARKFSLHAAVAIRLRSTYTGNDDYILEFFLPVSCKGSGEQQMLLNNLSSTMQRICK 480
LAHHARKFSLHAAVAIRLRSTYTGNDDYILEFFLPVSCKGSGEQQMLLNNLSSTMQRICK
Sbjct: 421 LAHHARKFSLHAAVAIRLRSTYTGNDDYILEFFLPVSCKGSGEQQMLLNNLSSTMQRICK 480
Query: 481 SLRTVYEAEVDNVNAGTAAVFRKNNESCLPTGHTESSSHGDQSITGASFEDTSLANKPGV 540
SLRTVYEAEVDNVNAGTAAVFRKNNESCLPTGHTESSSHGDQSITGASFEDTSLANKPGV
Sbjct: 481 SLRTVYEAEVDNVNAGTAAVFRKNNESCLPTGHTESSSHGDQSITGASFEDTSLANKPGV 540
Query: 541 MEPELAEQVQPSSIGHAEKKRSTAEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICR 600
MEPELAEQVQPSSIGHAEKKRSTAEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICR
Sbjct: 541 MEPELAEQVQPSSIGHAEKKRSTAEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICR 600
Query: 601 HHGISRWPSRKINKVNRSLKKIQTVINSVHGVDRSLQYDPATGSLVPVVSLPEKLTFPSC 660
HHGISRWPSRKINKVNRSLKKIQTVINSVHGVDRSLQYDPATGSLVPVVSLPEKLTFPSC
Sbjct: 601 HHGISRWPSRKINKVNRSLKKIQTVINSVHGVDRSLQYDPATGSLVPVVSLPEKLTFPSC 660
Query: 661 DGLPTPSVGKTVEENSDLKSEEGCSLPDGSQRQSCQLQISDVKKSNEDEFHIGSGNSDFY 720
DGLPTPSVGKTVEENSDLKSEEGCSLPDGSQRQSCQLQISDVKKSNEDEFHIGSGNSDFY
Sbjct: 661 DGLPTPSVGKTVEENSDLKSEEGCSLPDGSQRQSCQLQISDVKKSNEDEFHIGSGNSDFY 720
Query: 721 GANATAKSNSEVTQGPLCPTGAFSALHLKGTDCXXXXXXXXXXXXXXXXQIVGRNSPSIQ 780
GANATAKSNSEVTQGPLCPTGAFSALHLKGTDC QIVGRNSPSIQ
Sbjct: 721 GANATAKSNSEVTQGPLCPTGAFSALHLKGTDCTNPSSSLRPSSESTRNQIVGRNSPSIQ 780
Query: 781 QEDLDMLDNHEAEDKDHMHPXXXXXXXXXXXXXXXHPTFKQNTRSALKDAASPALTVKAT 840
QEDLDMLDNHEAEDKDHMHP HPTFKQNTRSALKDAASPALTVKAT
Sbjct: 781 QEDLDMLDNHEAEDKDHMHPSTSGMTDSSSGSASSHPTFKQNTRSALKDAASPALTVKAT 840
Query: 841 YNGDTVRFKFLPSMGWYHLLEEIAKRFKLPTGAYQLKYKDDEDEWVILANDSDLQECVDV 900
YNGDTVRFKFLPSMGWYHLLEEIAKRFKLPTGAYQLKYKDDEDEWVILANDSDLQECVDV
Sbjct: 841 YNGDTVRFKFLPSMGWYHLLEEIAKRFKLPTGAYQLKYKDDEDEWVILANDSDLQECVDV 900
Query: 901 LDSIGSRIVKLQVRDLPCIVSSSGSSTCLQLAAHSS 936
LDSIGSRIVKLQVRDLPCIVSSSGSSTCLQLAAHSS
Sbjct: 901 LDSIGSRIVKLQVRDLPCIVSSSGSSTCLQLAAHSS 936
>Os01g0236700 Plant regulator RWP-RK domain containing protein
Length = 938
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/550 (41%), Positives = 316/550 (57%), Gaps = 44/550 (8%)
Query: 139 LADRMLMALSLFRESLGSGALAQVWMPVEQEGHVVLSTCEQPFLLDQVLAG---YREVSR 195
+R+ AL F+ES L QVW PV+ VL+T QPF+LDQ G YR VS
Sbjct: 135 FKERLTQALRYFKESTDQHLLVQVWAPVKSGDRYVLTTSGQPFVLDQQSIGLLQYRAVSM 194
Query: 196 HFVFSAKEEPGLQPGLPGRVFISGVPEWTSSVLYYNRPEYLRMEHALHHEIRGSLAMPIY 255
++FS E + GLPGRV+ VPEWT +V YY+ EY R+ HA+ + + G++A+P++
Sbjct: 195 MYMFSVDGENAGELGLPGRVYKQKVPEWTPNVQYYSSTEYPRLNHAISYNVHGTVALPVF 254
Query: 256 DPSKDSCCAVFELVTRKEKPDFSAEMDNVCNALQAMNLKATK--GSSNQKFYTENQKFAF 313
DPS +C AV EL+ +K +++ E+D VC AL+A+NLK+T+ N + E ++ A
Sbjct: 255 DPSVQNCIAVVELIMTSKKINYAGEVDKVCKALEAVNLKSTEILDHPNVQICNEGRQSAL 314
Query: 314 TEILDVLRAICHAHMLPLALTWVPTS--NGIDGGYVVGKDGASFSQS--GKTIIRIHESA 369
EIL++L +C H LPLA TWVP + + G V K SF S G+ + + A
Sbjct: 315 VEILEILTVVCEEHKLPLAQTWVPCKYRSVLAHGGGVKKSCLSFDGSCMGEVCMSTSDVA 374
Query: 370 CYVNDGKMQGFLQACARRHLEKGQGIAGRALKSNLPFFSPDIREYSIEDYPLAHHARKFS 429
+V D M GF AC HL+KGQG++G+A P FS DI ++ +YPL H+AR F
Sbjct: 375 FHVIDAHMWGFRDACVEHHLQKGQGVSGKAFIYRRPCFSKDISQFCKLEYPLVHYARMFG 434
Query: 430 LHAAVAIRLRSTYTGNDDYILEFFLPVSCKGSGEQQMLLNNLSSTMQRICKSLRTVYEAE 489
L AI L+S YTG+DDYILEFFLP +C+ +Q LL ++ + M++ ++L+ V +
Sbjct: 435 LAGCFAICLQSMYTGDDDYILEFFLPPNCRNEDDQNALLESILARMKKCLRTLKVVGNGD 494
Query: 490 VDNVNAGTAAVFRKNNESCLPTGHTESS---------SHGDQSITGASFEDTSLANKPGV 540
+ V + V E H E+S S+G Q + E + NK +
Sbjct: 495 TNEVCLQISNVLIIETEDLKTNVHFENSEGCFRESPESNGSQRV----HEVDNDGNKVSI 550
Query: 541 MEPE--LAE---QVQPSSIGHA----------------EKKRSTAEKNISLDVLRKYFSG 579
M LA+ Q +S+G E++R AEK ISLDVL++YFSG
Sbjct: 551 MSERHLLADDNSQNNGASVGRPNGSGASDSLHKSNKPPERRRGKAEKTISLDVLQQYFSG 610
Query: 580 SLKDAAKSLGVCPTTLKRICRHHGISRWPSRKINKVNRSLKKIQTVINSVHGVDRSLQYD 639
SLK+AAKSLGVCPTT+KRICR HGISRWPSRKINKVNRSL K++ VI SV G D +
Sbjct: 611 SLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKQVIESVQGSDAAFNLT 670
Query: 640 PATGSL-VPV 648
TG L +PV
Sbjct: 671 SITGPLPIPV 680
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 832 SPALTVKATYNGDTVRFKFLPSMGWYHLLEEIAKRFKLPTGAYQLKYKDDEDEWVILAND 891
S +T+KA++ D VRF+F S L +E+AKR ++ G + +KY DD+ EWV LA +
Sbjct: 845 SGTVTIKASFKEDIVRFRFPCSGSVTALKDEVAKRLRMDVGMFDIKYLDDDHEWVKLACN 904
Query: 892 SDLQECVDVLDSIGSRIVKLQVRDLPC-IVSSSGSS 926
+DL+EC+++ GS +++L V D+ + SS GSS
Sbjct: 905 ADLEECMEI---SGSHVIRLLVSDVAAHLGSSCGSS 937
>Os11g0264300 Plant regulator RWP-RK domain containing protein
Length = 392
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/343 (54%), Positives = 245/343 (71%), Gaps = 10/343 (2%)
Query: 315 EILDVLRAICHAHMLPLALTWVPTSNGIDGGYVVGKDGASFSQSGKTIIRIHESACYVND 374
EI DVL+A+C AH+LPLAL W+P + D V + GA+F + K ++ I ESACYVND
Sbjct: 2 EIFDVLQAVCQAHLLPLALAWIPVCSKRDV-LVSVEYGANFGKRNKEVLCIEESACYVND 60
Query: 375 GKMQGFLQACARRHLEKGQGIAGRALKSNLPFFSPDIREYSIEDYPLAHHARKFSLHAAV 434
+M+ F+Q CA LEKGQG+AG A SN PFFS D+++Y + YPL +HARKF LHAAV
Sbjct: 61 TRMRDFVQVCAEHPLEKGQGVAGNAYLSNNPFFSSDVKDYDMHAYPLVNHARKFGLHAAV 120
Query: 435 AIRLRSTYTGNDDYILEFFLPVSCKGSGEQQMLLNNLSSTMQRICKSLRTVYEAEV-DNV 493
AIRL+STYT NDDY+LEFFLPV CKG GEQQ+LL+++S+TM+R+CKSLRTV +AE+ ++V
Sbjct: 121 AIRLQSTYTKNDDYVLEFFLPVLCKGGGEQQLLLDSISATMRRVCKSLRTVSDAELKEDV 180
Query: 494 NAGTAAVFRKNNESCLPTGHTESSSHGDQSITGASFEDTSLANKPGVMEPELAEQ----- 548
+ R P S D ++ + +T L + ++ +L++
Sbjct: 181 TRKPSNENRSGTRCPSPVNLIYSGREID--VSNETKTNTPLEYQIEGIDEQLSDTKSTNK 238
Query: 549 -VQPSSIGHAEKKRSTAEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICRHHGISRW 607
++ S+ EK+RS+ EK++SL VL++YFSGSLKDAAKS+GVCPTTLKRICR HGISRW
Sbjct: 239 LIKCSNASDGEKRRSSTEKSVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRW 298
Query: 608 PSRKINKVNRSLKKIQTVINSVHGVDRSLQYDPATGSLVPVVS 650
PSRKI KVNRSLKKIQ VI+SVHGV+ L+YDP+TG LV VS
Sbjct: 299 PSRKIKKVNRSLKKIQNVISSVHGVEGVLKYDPSTGCLVSSVS 341
>Os03g0131100 Plant regulator RWP-RK domain containing protein
Length = 942
Score = 309 bits (791), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 172/403 (42%), Positives = 241/403 (59%), Gaps = 24/403 (5%)
Query: 106 EAEKTGKSSGELGSDDGAHQGSSM--VPRSV-VGSSLADRMLMALSLFRESLGSGA---- 158
EAE + G L AH+G + P+ V V ++ +R+ AL S A
Sbjct: 90 EAEMPSRGGGGLEVSP-AHRGWTFQTAPQEVAVEPTVKERLRRALERIASQSQSQAQRGD 148
Query: 159 ---LAQVWMPVEQEGHVVLSTCEQPFLLD---QVLAGYREVSRHFVFSAKEEPGLQPGLP 212
L QVW+P VL+TC QPF LD Q LA YR VS + FSA E GLP
Sbjct: 149 GELLVQVWVPTRIGDRQVLTTCGQPFWLDRRNQRLANYRTVSMKYQFSADESARADLGLP 208
Query: 213 GRVFISGVPEWTSSVLYYNRPEYLRMEHALHHEIRGSLAMPIYDPSKDSCCAVFELVTRK 272
GRVF+ VPEWT V Y++ EY R++HA + +IRGS+A+P+++P +C V ELV
Sbjct: 209 GRVFVGRVPEWTPDVRYFSTEEYPRVQHAQYFDIRGSVALPVFEPRSRACLGVVELVMTT 268
Query: 273 EKPDFSAEMDNVCNALQAMNLKATKGSSN--QKFYTENQKFAFTEILDVLRAICHAHMLP 330
+K ++SAE++N+CNAL+ ++L+++ SS+ K + + EI+DVLRA+C H LP
Sbjct: 269 QKVNYSAEIENICNALKEVDLRSSDVSSDPRSKVVDASYRAIIPEIMDVLRAVCDTHNLP 328
Query: 331 LALTWVPTSNGIDGGYVVGKDGASFS-QSGKTIIRIHESACYVNDGKMQGFLQACARRHL 389
LA TW+P K G+ S +S K + + ACYV D + GF QAC+ HL
Sbjct: 329 LAQTWIPC-------ICQAKRGSRHSDESYKHCVSTVDEACYVRDCSVLGFHQACSEHHL 381
Query: 390 EKGQGIAGRALKSNLPFFSPDIREYSIEDYPLAHHARKFSLHAAVAIRLRSTYTGNDDYI 449
+G+G+ GRA +N P FSPDI YS YPL+HHA+ F L AAVAI+LRS TG+ D++
Sbjct: 382 FRGEGVVGRAFGTNEPCFSPDITTYSKTQYPLSHHAKLFGLRAAVAIQLRSVKTGSLDFV 441
Query: 450 LEFFLPVSCKGSGEQQMLLNNLSSTMQRICKSLRTVYEAEVDN 492
LEFFLP+ C + EQ+ +LN+LS+T+Q++C +LR V E+ N
Sbjct: 442 LEFFLPMKCINTEEQRAMLNSLSNTIQQVCYTLRVVKPKELVN 484
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 68/81 (83%)
Query: 557 AEKKRSTAEKNISLDVLRKYFSGSLKDAAKSLGVCPTTLKRICRHHGISRWPSRKINKVN 616
EK+R+ EK +SL LRK+F+GSLK+AAK+LGVCPTTLKRICR HGI+RWPSRKI KV
Sbjct: 612 VEKRRTKTEKTVSLQDLRKHFAGSLKEAAKNLGVCPTTLKRICRQHGINRWPSRKIKKVG 671
Query: 617 RSLKKIQTVINSVHGVDRSLQ 637
SLKK+Q VI+SVHG + ++Q
Sbjct: 672 HSLKKLQMVIDSVHGPEGTVQ 692
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 825 SALKDAASPALTVKATYNGDTVRFKFLPSMGWYHLLEEIAKRFKLPTGAY-QLKYKDDED 883
S ++ A S +L +KA Y + F+ PS G+ L EEI KRF + + LKY DDE
Sbjct: 835 SNVQKARSDSLKIKAIYGEERCIFRLQPSWGFQRLKEEIVKRFGISQDTHVDLKYLDDES 894
Query: 884 EWVILANDSDLQECVDVLDSIGSRIVKLQV 913
EWV+L D+DL EC+DV S ++ V++ V
Sbjct: 895 EWVLLTCDADLLECIDVYKSSSNQTVRILV 924
>Os09g0549450 Hypothetical protein
Length = 241
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 99/158 (62%), Gaps = 5/158 (3%)
Query: 137 SSLADRMLMALSLFRESLGSG-ALAQVWMPVE-QEGHVVLSTCEQPFLLDQ---VLAGYR 191
+S+ +R AL+ RE+ L Q+W+PV+ +G +VL+T QPF LDQ L +R
Sbjct: 83 TSVRERFDQALAYIRETQSDADVLVQLWVPVKGNDGQLVLTTSGQPFTLDQRSNSLIQFR 142
Query: 192 EVSRHFVFSAKEEPGLQPGLPGRVFISGVPEWTSSVLYYNRPEYLRMEHALHHEIRGSLA 251
EVS + FSA G PGLPGRVFI +PEW+ V Y+ EY R+ HA + ++ G++
Sbjct: 143 EVSTKYQFSADVASGSSPGLPGRVFIGRLPEWSPDVRYFTSYEYPRINHAQYLDVHGTMG 202
Query: 252 MPIYDPSKDSCCAVFELVTRKEKPDFSAEMDNVCNALQ 289
+P+++ SC V EL+ K+K +F++E++ +C+ALQ
Sbjct: 203 LPVFERGNYSCLGVIELIMTKQKLNFTSELNTICSALQ 240
>Os11g0615400
Length = 153
Score = 93.2 bits (230), Expect = 9e-19, Method: Composition-based stats.
Identities = 59/140 (42%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 159 LAQVWMPVEQEGHVVLSTCEQPFLLD---QVLAGYREVSRHFVFSAKEEPGL-QPGLPGR 214
+ QVW PV VL+T QPF+L L YR VS VF + GLP R
Sbjct: 1 MVQVWAPVRDGARRVLATRGQPFVLASQCHRLFQYRTVSLTCVFPVGGAAAADKQGLPAR 60
Query: 215 VFISGVPEWTSSVLYYNRPEYLRMEHALHHEIRGSLAMPIYDPSKDSC-CAVFELVTRKE 273
F +G EWT +V Y EY R+ +AL ++I+GSL +PI DP S AV ELV+
Sbjct: 61 AFDTGTLEWTPNVQCYGSGEYARISYALIYDIQGSLFLPILDPDDASSPLAVLELVSTAL 120
Query: 274 KPDFSAEMDNVCNALQAMNL 293
+ S E+ N+CNALQA++L
Sbjct: 121 RLRGSGEVTNLCNALQAISL 140
>Os02g0136000 Plant regulator RWP-RK domain containing protein
Length = 208
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%)
Query: 835 LTVKATYNGDTVRFKFLPSMGWYHLLEEIAKRFKLPTGAYQLKYKDDEDEWVILANDSDL 894
+T+KA++ GD +RF+ S G + +AKR L GA+ +KY DD+ EWV+L+ D+D
Sbjct: 101 VTIKASHRGDIIRFRVPCSAGVAAVKAVVAKRLSLDAGAFDVKYLDDDHEWVLLSCDADF 160
Query: 895 QECVDVLDSIGS 906
QEC+DV+ ++ S
Sbjct: 161 QECLDVVPALPS 172
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 32,567,516
Number of extensions: 1426872
Number of successful extensions: 3592
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3573
Number of HSP's successfully gapped: 10
Length of query: 936
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 826
Effective length of database: 11,292,261
Effective search space: 9327407586
Effective search space used: 9327407586
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 161 (66.6 bits)