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Os11g0264300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Plant regulator RWP-RK domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0137) R2 : 0.0659
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.164 (0.0289) R2dN8 : 0.0851 R2N8 : 0.0659
σ : 0.258
deviance : 30.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.31 0.201 10.4 -0.403 0.169 0.179 -0.867 0.424 0.104 14.7 21.08 9 -- --
19.11 0.205 10.4 -0.505 0.177 0.164 -0.592 -- 0.0821 14.8 21.08 9 -- --
20.26 0.21 10.4 -0.498 0.176 0.157 -- 0.086 0.0857 14.6 21.1 22 -- --
20.3 0.21 10.4 -0.519 0.176 0.158 -- -- 0.08 14.6 21.09 22 -- --
21.88 0.218 10.4 -0.507 -- 0.213 -- 0.109 0.065 -- 21 23 -- --
20.4 0.212 10.4 -0.464 0.222 -- -0.551 -- 0.118 14.5 -- -- -- --
21.48 0.217 10.4 -0.478 0.22 -- -- -- 0.115 14.3 -- -- -- --
21.94 0.218 10.4 -0.539 -- 0.213 -- -- 0.0632 -- 21.02 22 -- --
27.11 0.243 10.4 -- 0.204 0.0892 -- -- 0.151 14.5 20.95 22 -- --
24.35 0.231 10.4 -0.487 -- -- -- -- 0.11 -- -- -- -- --
27.5 0.245 10.4 -- 0.229 -- -- -- 0.168 14.3 -- -- -- --
29.37 0.252 10.4 -- -- 0.152 -- -- 0.135 -- 20.92 22 -- --
30.61 0.258 10.4 -- -- -- -- -- 0.164 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.34 temperature 20.0 270 > th dose dependent rect. 20 9
6 18.48 temperature 25.0 90 < th dose dependent rect. 21 9
10 18.52 temperature 20.0 30 > th dose dependent rect. 23 7
19 18.54 temperature 25.0 90 < th dose dependent rect. 11 19
21 18.55 temperature 25.0 270 < th dose dependent rect. 21 7
22 18.55 temperature 25.0 90 < th dose dependent rect. 23 7
35 18.56 temperature 25.0 90 < th dose dependent rect. 17 13
38 18.57 temperature 25.0 30 < th dose dependent sin 9 NA
40 18.57 radiation 30.0 270 < th dose dependent rect. 11 2
64 18.60 humidity 80.0 720 > th dose independent rect. 12 1
69 18.61 atmosphere 1015.0 4320 > th dose independent rect. 4 1
71 18.61 atmosphere 1015.0 4320 < th dose independent rect. 4 1
82 18.62 atmosphere 1015.0 4320 > th dose dependent rect. 5 1
94 18.63 radiation 30.0 90 < th dose dependent rect. 11 5
122 18.65 wind 5.0 4320 < th dose independent rect. 22 3
124 18.65 temperature 20.0 30 > th dose independent rect. 21 23
140 18.66 humidity 80.0 720 > th dose dependent rect. 12 1
142 18.66 wind 5.0 4320 > th dose dependent rect. 22 3
175 18.68 temperature 25.0 10 < th dose dependent rect. 20 19
181 18.69 wind 5.0 4320 > th dose independent rect. 22 3
193 18.69 temperature 25.0 30 < th dose dependent rect. 21 17
227 18.72 humidity 80.0 720 > th dose independent rect. 11 3
239 18.73 temperature 20.0 30 < th dose independent rect. 15 15
256 18.73 temperature 25.0 10 < th dose dependent rect. 18 21
312 18.76 wind 7.0 1440 < th dose independent rect. 24 9
313 18.76 temperature 20.0 30 < th dose independent rect. 17 13
322 18.76 humidity 50.0 270 > th dose dependent rect. 11 3
364 18.78 temperature 20.0 1440 > th dose dependent rect. 4 1
385 18.79 wind 7.0 1440 > th dose independent rect. 24 9
392 18.79 atmosphere 1000.0 270 > th dose independent rect. 13 23
393 18.79 temperature 25.0 720 < th dose dependent rect. 18 5
452 18.80 temperature 25.0 10 < th dose dependent rect. 23 23
456 18.81 temperature 25.0 10 < th dose dependent no NA NA
470 18.81 temperature 25.0 30 < th dose dependent rect. 3 23
473 18.81 temperature 25.0 10 < th dose dependent rect. 13 23
481 18.82 temperature 20.0 10 > th dose independent sin 9 NA
486 18.82 temperature 25.0 720 < th dose dependent rect. 19 2
505 18.82 temperature 25.0 10 < th dose dependent rect. 1 23
513 18.83 humidity 50.0 14400 > th dose independent rect. 14 1
524 18.83 wind 3.0 1440 > th dose dependent rect. 2 1
554 18.84 precipitation 0.1 14400 < th dose independent rect. 14 2
559 18.84 radiation 20.0 90 < th dose independent rect. 11 5
562 18.84 temperature 20.0 10 > th dose independent rect. 23 9
563 18.84 temperature 20.0 30 < th dose independent rect. 19 11
568 18.84 precipitation 0.1 14400 < th dose dependent rect. 14 2
598 18.85 temperature 20.0 30 > th dose independent rect. 12 17
607 18.85 wind 5.0 1440 > th dose dependent rect. 24 9
619 18.85 temperature 20.0 10 > th dose dependent rect. 16 20
672 18.87 atmosphere 1000.0 10 > th dose independent rect. 16 20
674 18.87 temperature 20.0 30 > th dose independent rect. 23 23
706 18.88 temperature 20.0 10 < th dose independent sin 9 NA
708 18.88 radiation 40.0 270 < th dose independent rect. 11 2
711 18.88 radiation 40.0 90 < th dose independent rect. 11 5
717 18.88 temperature 20.0 10 > th dose independent rect. 21 11
728 18.88 humidity 50.0 14400 < th dose dependent rect. 14 1
733 18.88 radiation 40.0 10 < th dose dependent rect. 11 5
754 18.89 wind 3.0 1440 > th dose independent rect. 2 1
755 18.89 humidity 50.0 14400 < th dose independent rect. 14 1
756 18.89 radiation 1.0 1440 < th dose independent rect. 11 1
757 18.89 radiation 20.0 270 < th dose independent rect. 11 2
758 18.89 precipitation 0.1 14400 > th dose independent rect. 14 2
763 18.89 temperature 20.0 30 > th dose independent rect. 21 8
776 18.89 atmosphere 995.0 1440 > th dose independent rect. 17 20
779 18.89 temperature 20.0 10 > th dose dependent sin 9 NA
780 18.89 radiation 1.0 1440 < th dose dependent rect. 11 1
781 18.89 precipitation 0.1 4320 > th dose dependent rect. 3 1
783 18.89 precipitation 0.1 14400 > th dose dependent rect. 14 2
799 18.89 temperature 10.0 10 > th dose dependent rect. 16 20
803 18.89 temperature 25.0 30 < th dose dependent rect. 5 23
807 18.90 precipitation 0.1 4320 < th dose independent rect. 3 1
813 18.90 temperature 20.0 10 > th dose independent rect. 23 6
826 18.90 temperature 20.0 270 > th dose dependent sin 10 NA
827 18.90 temperature 10.0 270 > th dose dependent sin 11 NA
831 18.90 precipitation 0.1 4320 < th dose dependent rect. 3 1
931 18.92 temperature 20.0 10 < th dose independent rect. 22 9
956 18.92 atmosphere 1000.0 270 > th dose independent rect. 14 21
988 18.93 atmosphere 1015.0 4320 > th dose independent sin 5 NA
991 18.93 precipitation 0.1 4320 > th dose independent rect. 3 1