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Os04g0495800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to NIN-like protein 2 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0157) R2 : 0.841
β1 : -- (--) R2dD : -- R2D : --
β2 : 2 (0.0408) R2dC : 0.846 R2C : 0.84
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0348 (0.033) R2dN8 : 0.000503 R2N8 : -0.00531
σ : 0.295
deviance : 39.88
__
_____
C
peak time of C : 7.02
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.15 0.271 10.7 0.333 2.01 0.952 -0.117 0.0964 0.03 9.18 0.1948 275 -- --
33.08 0.268 10.7 0.337 2 0.956 -0.195 -- 0.0311 9.19 0.02 283 -- --
33.11 0.268 10.7 0.338 2 0.95 -- 0.135 0.0238 9.19 0.06 283 -- --
33.21 0.268 10.7 0.339 2 0.967 -- -- 0.0338 9.21 0.06 283 -- --
58.93 0.358 10.7 0.489 -- 2.48 -- 3.09 0.0801 -- 0.6761 857 -- --
38.48 0.291 10.7 0.229 2 -- 0.0506 -- -0.00904 7.03 -- -- -- --
38.49 0.291 10.7 0.23 2 -- -- -- -0.00915 7.03 -- -- -- --
47.16 0.32 10.7 0.489 -- 2.69 -- -- 0.111 -- 0.875 861 -- --
36.17 0.28 10.7 -- 2.02 0.958 -- -- -0.00592 9.18 0.3119 274 -- --
248.44 0.737 10.7 0.27 -- -- -- -- 0.0273 -- -- -- -- --
39.88 0.295 10.7 -- 2 -- -- -- -0.0348 7.02 -- -- -- --
52.66 0.338 10.7 -- -- 2.62 -- -- 0.0548 -- 1.68 851 -- --
250.37 0.739 10.7 -- -- -- -- -- -0.00267 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.75 temperature 20.0 90 > th dose independent rect. 16 19
5 29.65 temperature 20.0 270 > th dose independent rect. 14 20
18 30.49 temperature 15.0 90 > th dose dependent rect. 16 18
30 30.90 temperature 15.0 270 > th dose independent rect. 5 13
32 30.96 radiation 1.0 270 < th dose dependent rect. 18 17
38 31.03 temperature 10.0 270 > th dose dependent rect. 14 20
39 31.06 radiation 1.0 270 < th dose dependent rect. 18 11
53 31.29 temperature 20.0 90 > th dose independent rect. 16 11
57 31.40 atmosphere 995.0 270 > th dose independent rect. 18 11
63 31.45 wind 9.0 270 < th dose independent rect. 18 11
68 31.50 temperature 10.0 270 > th dose independent rect. 18 11
69 31.50 humidity 50.0 270 > th dose independent rect. 18 11
70 31.50 radiation 20.0 270 < th dose independent rect. 18 11
75 31.50 atmosphere 1015.0 270 < th dose independent rect. 5 13
77 31.51 radiation 1.0 270 < th dose independent rect. 18 11
82 31.52 precipitation 0.1 270 < th dose independent rect. 5 13
83 31.52 precipitation 0.1 270 < th dose dependent rect. 5 13
88 31.55 radiation 1.0 270 < th dose dependent sin 11 NA
104 31.74 temperature 30.0 270 < th dose independent rect. 19 10
129 31.83 radiation 1.0 90 > th dose independent rect. 11 5
130 31.83 radiation 1.0 270 > th dose independent rect. 15 19
134 31.85 radiation 1.0 270 < th dose independent sin 11 NA
135 31.87 temperature 20.0 270 > th dose independent rect. 14 11
146 31.94 precipitation 0.1 270 < th dose independent rect. 18 11
149 31.94 precipitation 0.1 270 < th dose dependent rect. 18 11
151 31.95 radiation 1.0 270 > th dose independent sin 11 NA
154 31.97 radiation 1.0 270 > th dose independent rect. 16 17
166 32.05 atmosphere 1015.0 90 < th dose independent rect. 16 19
169 32.07 radiation 1.0 270 < th dose independent rect. 19 16
178 32.12 temperature 20.0 90 > th dose independent rect. 23 12
179 32.13 wind 9.0 270 < th dose independent rect. 5 13
180 32.13 atmosphere 995.0 90 > th dose independent rect. 16 19
186 32.17 temperature 10.0 90 > th dose independent rect. 11 5
187 32.17 atmosphere 1015.0 90 < th dose independent rect. 11 5
194 32.18 temperature 15.0 90 > th dose dependent rect. 16 11
200 32.21 precipitation 0.1 90 < th dose independent rect. 11 5
201 32.21 precipitation 0.1 90 < th dose dependent rect. 11 5
202 32.22 humidity 50.0 30 > th dose independent rect. 16 19
224 32.34 temperature 20.0 270 > th dose independent rect. 21 12
235 32.37 radiation 1.0 270 > th dose independent rect. 11 2
236 32.37 wind 9.0 90 < th dose independent rect. 11 5
243 32.40 precipitation 0.1 90 < th dose independent rect. 16 19
244 32.40 precipitation 0.1 90 < th dose dependent rect. 16 19
248 32.43 temperature 20.0 90 > th dose independent rect. 6 5
250 32.43 temperature 20.0 90 > th dose independent rect. 5 23
251 32.44 wind 1.0 90 > th dose independent rect. 11 5
255 32.46 temperature 15.0 10 > th dose dependent rect. 16 12
257 32.48 atmosphere 995.0 90 > th dose independent rect. 11 5
268 32.50 temperature 10.0 1440 > th dose independent rect. 12 5
274 32.50 temperature 10.0 1440 > th dose independent rect. 17 19
280 32.51 atmosphere 995.0 10 > th dose independent rect. 16 19
295 32.54 wind 9.0 90 < th dose independent rect. 16 19
298 32.54 wind 9.0 270 < th dose dependent rect. 5 4
308 32.57 temperature 10.0 270 > th dose independent rect. 11 2
309 32.57 atmosphere 995.0 270 > th dose independent rect. 11 2
310 32.57 atmosphere 1015.0 270 < th dose independent rect. 11 2
311 32.57 precipitation 0.1 270 < th dose independent rect. 11 2
320 32.57 temperature 10.0 270 > th dose independent rect. 13 22
321 32.57 precipitation 0.1 270 < th dose dependent rect. 11 2
330 32.58 temperature 10.0 270 > th dose dependent rect. 5 4
336 32.60 radiation 40.0 10 < th dose independent rect. 11 5
341 32.61 wind 1.0 270 > th dose independent rect. 9 20
342 32.61 wind 9.0 270 < th dose independent rect. 9 20
354 32.64 wind 1.0 270 > th dose independent rect. 11 2
361 32.65 atmosphere 995.0 270 > th dose independent rect. 5 13
364 32.65 temperature 10.0 270 > th dose independent rect. 14 20
369 32.66 precipitation 0.1 10 < th dose independent rect. 16 19
373 32.66 precipitation 0.1 10 < th dose dependent rect. 16 19
374 32.67 temperature 20.0 270 > th dose independent rect. 6 2
378 32.67 wind 7.0 270 < th dose dependent rect. 6 2
392 32.69 precipitation 0.1 270 < th dose independent rect. 14 20
394 32.69 precipitation 0.1 270 < th dose dependent rect. 14 20
401 32.71 atmosphere 1015.0 270 < th dose independent rect. 14 20
403 32.72 humidity 50.0 270 > th dose independent rect. 11 2
406 32.72 humidity 50.0 10 > th dose independent rect. 11 5
408 32.73 radiation 1.0 270 > th dose independent rect. 6 2
411 32.74 wind 9.0 270 < th dose independent rect. 11 2
418 32.74 precipitation 0.1 270 < th dose independent rect. 13 22
420 32.74 precipitation 0.1 270 < th dose dependent rect. 13 22
422 32.75 wind 5.0 270 < th dose independent rect. 5 4
428 32.76 precipitation 0.1 270 < th dose independent rect. 5 4
430 32.76 humidity 50.0 90 > th dose independent rect. 11 5
432 32.76 precipitation 0.1 270 < th dose dependent rect. 5 4
441 32.78 wind 9.0 270 < th dose independent rect. 8 22
447 32.79 temperature 10.0 270 > th dose independent rect. 5 4
449 32.79 humidity 50.0 270 > th dose independent rect. 5 4
450 32.79 atmosphere 995.0 270 > th dose independent rect. 5 4
451 32.79 atmosphere 1015.0 270 < th dose independent rect. 5 4
453 32.79 temperature 10.0 270 > th dose independent rect. 9 20
454 32.79 temperature 10.0 270 > th dose dependent rect. 14 10
470 32.83 precipitation 0.1 1440 < th dose independent rect. 10 1
472 32.83 radiation 1.0 270 > th dose independent rect. 5 4
473 32.83 wind 1.0 10 > th dose independent rect. 11 5
475 32.83 atmosphere 995.0 10 > th dose independent rect. 11 5
488 32.83 precipitation 0.1 1440 < th dose dependent rect. 10 1
496 32.85 atmosphere 995.0 270 > th dose independent rect. 14 20
498 32.85 temperature 10.0 270 > th dose dependent rect. 6 2
520 32.88 radiation 40.0 270 < th dose independent rect. 5 4
523 32.88 wind 1.0 270 > th dose independent rect. 19 10
528 32.89 wind 7.0 90 < th dose independent rect. 11 19
570 32.97 precipitation 0.1 270 < th dose independent rect. 6 2
572 32.97 precipitation 0.1 270 < th dose dependent rect. 6 2
574 32.98 wind 3.0 270 < th dose independent rect. 6 2
584 33.00 wind 7.0 270 < th dose independent rect. 6 2
586 33.00 temperature 10.0 270 > th dose independent rect. 6 2
588 33.00 temperature 20.0 720 > th dose independent rect. 15 2
589 33.00 temperature 30.0 270 < th dose independent rect. 6 2
590 33.00 humidity 50.0 270 > th dose independent rect. 6 2
592 33.00 atmosphere 995.0 270 > th dose independent rect. 6 2
593 33.00 atmosphere 1015.0 270 < th dose independent rect. 6 2
594 33.00 temperature 10.0 270 > th dose independent rect. 8 22
596 33.01 temperature 10.0 43200 > th dose independent rect. 10 1
598 33.01 radiation 40.0 270 < th dose independent rect. 6 2
604 33.02 humidity 90.0 14400 < th dose independent rect. 5 2
606 33.02 wind 9.0 270 < th dose independent rect. 14 20
611 33.03 temperature 10.0 90 > th dose independent rect. 11 19
615 33.04 temperature 30.0 270 < th dose independent rect. 5 4
625 33.05 humidity 50.0 270 > th dose dependent rect. 10 3
636 33.07 humidity 90.0 14400 < th dose independent rect. 3 5
640 33.08 temperature 20.0 720 > th dose independent rect. 22 2
644 33.08 atmosphere 1015.0 90 < th dose dependent rect. 16 19
690 33.14 precipitation 0.1 90 < th dose independent rect. 11 19
692 33.14 precipitation 0.1 90 < th dose dependent rect. 11 19
702 33.16 precipitation 0.1 270 < th dose independent rect. 9 20
703 33.16 precipitation 0.1 270 < th dose dependent rect. 9 20
734 33.20 radiation 1.0 90 > th dose dependent sin 10 NA
739 33.21 humidity 90.0 14400 < th dose independent rect. 2 7
745 33.21 radiation 40.0 90 < th dose dependent sin 10 NA
747 33.21 temperature 10.0 90 > th dose dependent rect. 11 5
770 33.23 radiation 40.0 10 < th dose independent rect. 11 19
774 33.23 atmosphere 995.0 90 > th dose dependent rect. 11 5
781 33.24 temperature 10.0 10 > th dose dependent rect. 6 5
816 33.27 radiation 1.0 1440 > th dose independent rect. 14 1
840 33.29 humidity 50.0 270 > th dose independent rect. 14 20
852 33.30 humidity 50.0 270 > th dose dependent rect. 6 1
864 33.31 radiation 1.0 1440 < th dose dependent rect. 13 3
867 33.32 radiation 40.0 270 < th dose independent rect. 10 3
894 33.32 atmosphere 995.0 270 > th dose dependent rect. 11 2
956 33.36 radiation 20.0 10 < th dose dependent sin 17 NA
957 33.36 humidity 80.0 14400 > th dose dependent rect. 5 2
960 33.36 radiation 1.0 270 < th dose dependent rect. 6 23
973 33.37 atmosphere 1015.0 720 < th dose independent rect. 22 20
976 33.37 radiation 1.0 270 > th dose dependent rect. 16 17
982 33.38 radiation 40.0 270 < th dose independent rect. 15 18
983 33.38 wind 9.0 10 < th dose independent rect. 11 19
987 33.38 temperature 15.0 90 > th dose dependent rect. 23 11
999 33.39 atmosphere 1000.0 10 > th dose independent rect. 6 5