BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0463600 Os04g0463600|AK067018
(336 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0463600 Conserved hypothetical protein 665 0.0
AK073397 665 0.0
Os12g0299600 Transposase, IS4 domain containing protein 139 4e-33
Os02g0813200 Conserved hypothetical protein 136 2e-32
Os06g0595700 Transposase, IS4 domain containing protein 135 4e-32
Os04g0471100 Similar to Transposase (Fragment) 121 8e-28
Os05g0217900 Conserved hypothetical protein 115 6e-26
Os06g0481800 115 6e-26
Os05g0252800 112 4e-25
Os10g0468200 109 4e-24
Os07g0115800 108 6e-24
Os09g0122200 108 6e-24
Os03g0643100 Homeodomain-like containing protein 108 7e-24
Os06g0190900 Intradiol ring-cleavage dioxygenase domain con... 74 2e-13
Os07g0210800 68 8e-12
>Os04g0463600 Conserved hypothetical protein
Length = 336
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/336 (95%), Positives = 322/336 (95%)
Query: 1 MAGRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQ 60
MAGRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQ
Sbjct: 1 MAGRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQ 60
Query: 61 EHETQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPKARKYQFKSFPLLQ 120
EHETQLKRDYRLVKLILQREGVTWDQNASM MPKARKYQFKSFPLLQ
Sbjct: 61 EHETQLKRDYRLVKLILQREGVTWDQNASMIRTTDEIWDEIIEEMPKARKYQFKSFPLLQ 120
Query: 121 SLEVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDGENN 180
SLEVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDGENN
Sbjct: 121 SLEVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDGENN 180
Query: 181 IGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQKDKR 240
IGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQKDKR
Sbjct: 181 IGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQKDKR 240
Query: 241 KKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMTDVSDQVKI 300
KKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMTDVSDQVKI
Sbjct: 241 KKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMTDVSDQVKI 300
Query: 301 LASDVFKDAANREIFLSYDLRLRTLWIKREVNRLLT 336
LASDVFKDAANREIFLSYDLRLRTLWIKREVNRLLT
Sbjct: 301 LASDVFKDAANREIFLSYDLRLRTLWIKREVNRLLT 336
>AK073397
Length = 336
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/336 (95%), Positives = 322/336 (95%)
Query: 1 MAGRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQ 60
MAGRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQ
Sbjct: 1 MAGRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQ 60
Query: 61 EHETQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPKARKYQFKSFPLLQ 120
EHETQLKRDYRLVKLILQREGVTWDQNASM MPKARKYQFKSFPLLQ
Sbjct: 61 EHETQLKRDYRLVKLILQREGVTWDQNASMIRTTDEIWDEIIEEMPKARKYQFKSFPLLQ 120
Query: 121 SLEVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDGENN 180
SLEVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDGENN
Sbjct: 121 SLEVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDGENN 180
Query: 181 IGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQKDKR 240
IGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQKDKR
Sbjct: 181 IGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQKDKR 240
Query: 241 KKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMTDVSDQVKI 300
KKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMTDVSDQVKI
Sbjct: 241 KKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMTDVSDQVKI 300
Query: 301 LASDVFKDAANREIFLSYDLRLRTLWIKREVNRLLT 336
LASDVFKDAANREIFLSYDLRLRTLWIKREVNRLLT
Sbjct: 301 LASDVFKDAANREIFLSYDLRLRTLWIKREVNRLLT 336
>Os12g0299600 Transposase, IS4 domain containing protein
Length = 754
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 156/335 (46%), Gaps = 30/335 (8%)
Query: 3 GRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEH 62
RA W K LVD+LHE+N HYR QNGW ++ W K+V EF DR+P K QIQ+
Sbjct: 437 SRASWNPGLEKALVDLLHEHNNPHYRCQNGWTSEAWNKVVKEFRDRHPYVAMNKQQIQDK 496
Query: 63 ETQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPKARKY-QFKSFPLLQS 121
E +LKRDYRL+K ++ G +WD M K RK+ + KSFPL +S
Sbjct: 497 EKELKRDYRLLKEARKQSGASWDNQRCMIVADDAVWANIITSNEKVRKFSKNKSFPLFES 556
Query: 122 LEVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDGENNI 181
L L++G EG N +P + + + + S P V DD E
Sbjct: 557 LGELYDGQTAEGNMNFTSIEP-FQHATLTQVNEYLERSDSFPD-----VNWVADDDE--- 607
Query: 182 GILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQKDKRK 241
T E+ Q D+ +N + + + + P+++KR
Sbjct: 608 -----TTEV--QDEDNAVEHENQGSHITITSRANGEKNVKKTKSTERERVEKTPKRNKRN 660
Query: 242 KRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDG--------EPFSISTCIKALHSMTD 293
D+ M ++LE R +Q+ +E K+E++ + SI CI + SM +
Sbjct: 661 -----DVVDMMGSYLEMRKRQSEEEEAKKREEEAKKREEASKVDDCSIRNCITVVESMEE 715
Query: 294 VSDQVKILASDVFKDAANREIFLSYDLRLRTLWIK 328
+S++ K+ + VFKDA NREIF+S R +W++
Sbjct: 716 LSNEEKVKSFGVFKDAQNREIFMSAGPMTRLIWLR 750
>Os02g0813200 Conserved hypothetical protein
Length = 704
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 155/334 (46%), Gaps = 35/334 (10%)
Query: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
RA W K LV++LHE+N YR QNGW ++ W KIV EF+++ TK QIQE E
Sbjct: 363 RASWNPALEKILVELLHEHNTPEYRGQNGWTSEAWNKIVKEFHEKDRYVCLTKSQIQEKE 422
Query: 64 TQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPKARKYQFKSFPLLQSLE 123
+LKR+YR++K ++ G +W+ + PKA+K++ KSFPL ++L
Sbjct: 423 KELKREYRMLKEARKQSGASWNNQRCIIEAEPAIWNNIIISFPKAKKFRTKSFPLFEALG 482
Query: 124 VLFEGDIPEGEHNLMPSKP------QLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDG 177
L++G EG +N ++P + D+ GN P V D
Sbjct: 483 ELYDGHTAEGTYNFTSTEPLQHPIITQVESDQDDLGNTEIIFPDYEDTLTYQVQDDADAT 542
Query: 178 ENNIGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQK 237
E++ +R E+ P V+ P++ + +P+ + +E
Sbjct: 543 EDDNANAERLKEM-------------PHRRVVAVPRNKEEKEPKRQKKSVGVEGLMERYL 589
Query: 238 DKRKKR---KVPDIQQTMEAFLEFRMKQARL-----------KEQAKKEKKDGEPFSIST 283
D R K+ + + + EA L R K+A+L KE +K+ FSI
Sbjct: 590 DMRTKQTEDEAAQLAREKEAHLA-REKEAQLAREKEAHLAREKEAYLAREKESNDFSIKR 648
Query: 284 CIKALHSMTDVSDQVKILASDVFKDAANREIFLS 317
CI L+SM DV K+ A VFK+A NREIF+S
Sbjct: 649 CISVLNSM-DVRKAEKVKAYTVFKNAENREIFVS 681
>Os06g0595700 Transposase, IS4 domain containing protein
Length = 817
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 153/343 (44%), Gaps = 61/343 (17%)
Query: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
R W K LV++LHE+N YR QNGW ++ KIV EF+++ TK QIQE E
Sbjct: 489 RTSWNPALEKILVELLHEHNTPEYRGQNGWTSEARNKIVKEFHEKDRYVCLTKSQIQEKE 548
Query: 64 TQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPKARKYQFKSFPLLQSLE 123
+LKR+YR++K ++ G +W+ + PKA+K++ KSFPL ++L
Sbjct: 549 KELKREYRMLKEARKQSGASWNNQRCIIEAEPAIWNNIIISFPKAKKFRTKSFPLFEALG 608
Query: 124 VLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDD--GENNI 181
L++G EG +N ++P P T + D G I
Sbjct: 609 ELYDGYTAEGTYNFTSTEPL--------------------QHPIITQVESDQDDLGNTEI 648
Query: 182 GILQRTPELGQQGLDDVDILQNP---TEEVLERPQHGADPKPQSADEPAHSSSCIEPQKD 238
L L Q DDVD ++ E + E P P++ +E K+
Sbjct: 649 IFLDYEDTLAYQVQDDVDATEDDNANAERLKEMPHRRVVAVPRNKEE-----------KE 697
Query: 239 KRKKRKVPDIQQTMEAFLEFRMKQ------------------------ARLKEQAKKEKK 274
++++K ++ ME +L+ R KQ AR KE +K
Sbjct: 698 PKRQKKSVGVEGLMERYLDMRTKQTEDEAAQLAREKEAHLAREKEAQLAREKEAHLAREK 757
Query: 275 DGEPFSISTCIKALHSMTDVSDQVKILASDVFKDAANREIFLS 317
+ FSI CI L+SM DV+ K+ A VFK++ NREIF+S
Sbjct: 758 ESNDFSIKRCISVLNSM-DVTKAEKVKAYTVFKNSENREIFVS 799
>Os04g0471100 Similar to Transposase (Fragment)
Length = 461
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 154/339 (45%), Gaps = 66/339 (19%)
Query: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
RA W A K LVD+LH++N YR+QNGW T+ W +IV F++++P FTK
Sbjct: 175 RASWNAGLEKALVDLLHDHNNDCYRSQNGWSTEAWNRIVKSFHEKFPYVNFTKSH----- 229
Query: 64 TQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPKARKYQFKSFPLLQSLE 123
PKA+K++ KSFPL ++L
Sbjct: 230 ------------------------------------------PKAKKFRNKSFPLFEALG 247
Query: 124 VLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPS-IP-GRPCSTVIAGIDDGENNI 181
L++G EG N P + + T PS IP +P T A + ++ +
Sbjct: 248 ELYDGHTAEGTMNFTSIAPSQVP--ITKPFQVTVTQPSHIPLTQPSQTSQATVT--QHFM 303
Query: 182 GILQRTP----ELGQQGLDDVDILQNP-TEEVLERPQHGADPKPQSADEPAHSSSCIEPQ 236
G + P + DD+ I++ P + R + G K ++ H+ + + +
Sbjct: 304 GEDENFPFDSHVHNAESDDDLRIVEQPIASDATTRSRMG---KRVASATNKHAGTSDKTE 360
Query: 237 KDKRKKRKVPDIQQTMEAFLEFRMKQARL----KEQAKKEKKDGEPFSISTCIKALHSMT 292
K +++R+ + + M FLEF+ KQA +E+A+ + E F I CI + SM
Sbjct: 361 KATQRRRQDGKVVEMMGKFLEFKEKQAETEIMQQERARSNVHEDE-FPIPVCIAVVDSME 419
Query: 293 DVSDQVKILASDVFKDAANREIFLSYDLRLRTLWIKREV 331
D+SD K+LA DVFKD NR IF++ R W++R++
Sbjct: 420 DMSDDEKVLAYDVFKDPQNRAIFMTAKDSTRLKWLRRKI 458
>Os05g0217900 Conserved hypothetical protein
Length = 558
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 3 GRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEH 62
RA W K LVD+LHE+N HYR QNGW ++ W K+V EF DR+P K QIQ+
Sbjct: 281 SRASWNPGPEKALVDLLHEHNNPHYRCQNGWTSEAWNKVVKEFRDRHPYVTMNKQQIQDK 340
Query: 63 ETQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPKARKY-QFKSFPLLQS 121
E +LKRDYRL+K ++ G +WD M K RK+ + KSFPL +S
Sbjct: 341 EKELKRDYRLLKEARKQSGASWDNQRCMIVADDAVWANIITSNEKVRKFSKNKSFPLFES 400
Query: 122 LEVLFEGDIPEGEHNLMPSKP 142
L L++G EG N +P
Sbjct: 401 LGELYDGQTAEGNMNFTSIEP 421
>Os06g0481800
Length = 493
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Query: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
RA W K +VD+LHE+N HYR QNGW ++ W K+V EF DR+P K QIQ+ E
Sbjct: 210 RASWNPGLEKAIVDLLHEHNNPHYRCQNGWTSEAWNKVVKEFRDRHPYVTMNKQQIQDKE 269
Query: 64 TQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPKARKY-QFKSFPLLQSL 122
+LKRDYRL+K ++ G +WD M K RK+ + KSFPL +SL
Sbjct: 270 KELKRDYRLLKEARKQSGASWDNQRCMIVADDAVWANVITSNEKVRKFSKNKSFPLFESL 329
Query: 123 EVLFEGDIPEGEHNLMPSKP 142
L++G EG N +P
Sbjct: 330 GELYDGQTAEGNMNFTSIEP 349
>Os05g0252800
Length = 481
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 153/361 (42%), Gaps = 88/361 (24%)
Query: 3 GRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEH 62
RA W A K LVD+LH++N YR+QNGW T+ W +IV F++++P FTK
Sbjct: 174 SRASWNAGLEKALVDLLHDHNNDCYRSQNGWSTEAWNRIVKSFHEKFPYVNFTKSH---- 229
Query: 63 ETQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPKARKYQFKSFPLLQSL 122
PKA+K++ KSF L ++L
Sbjct: 230 -------------------------------------------PKAKKFRNKSFSLFEAL 246
Query: 123 EVLFEGDIPEGEHNLMPSKPQ------LAGRNVDEGGNNMSTAPS--------------- 161
G++ + +H L S + G + N S APS
Sbjct: 247 -----GELYDAKHVLFSSPKHYLTSLSVVGHTAEGTMNFTSIAPSQVPITQPFQVPVTQP 301
Query: 162 --IP-GRPCSTVIAGIDD---GENNIGILQRTPELGQQGLDDVDILQNP-TEEVLERPQH 214
IP +P T A + GE+ + DD+ I++ P + R +
Sbjct: 302 SHIPLTQPSQTSQATVTQHYMGEDENFPFDSHIHNAESDDDDLRIVEQPIASDASTRSRM 361
Query: 215 GADPKPQSADEPAHSSSCIEPQKDKRKKRKVPDIQQTMEAFLEFRMKQARL----KEQAK 270
G K ++ H+ + + +K +++R+ + + M FLEF+ KQA +E+A+
Sbjct: 362 G---KRVASATNKHAGTSDKTEKATQRRRQDGKVVEMMGKFLEFKEKQAETEITQQERAR 418
Query: 271 KEKKDGEPFSISTCIKALHSMTDVSDQVKILASDVFKDAANREIFLSYDLRLRTLWIKRE 330
+ E F I CI + SM D+SD K+LA DVFKD NR IF++ R W++R+
Sbjct: 419 SNVHEDE-FPIPVCIAVVDSMEDMSDDEKVLAYDVFKDPQNRAIFMTAKDSTRLKWLRRK 477
Query: 331 V 331
+
Sbjct: 478 I 478
>Os10g0468200
Length = 527
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 148/345 (42%), Gaps = 38/345 (11%)
Query: 2 AGRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQE 61
A RARW + L+++L ++++ +RTQN W + W IV N ++ FT Q+++
Sbjct: 48 AKRARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKF-GTSFTTNQVKQ 106
Query: 62 HETQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPK-ARKYQFKSFPLLQ 120
E LK+DYR VK +L + G WD + M K A ++ KSFP
Sbjct: 107 KEQDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFD 166
Query: 121 SLEVLFEGDIPEG------EHNLMPSKPQLAGRNVDEGGNNMSTAPS----IPGRPCSTV 170
L L++G EG +H +K A + + +PS PG
Sbjct: 167 DLAPLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQF 226
Query: 171 IAGIDDGENNIGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSS 230
G + N+ Q +P P H P SA P+
Sbjct: 227 PFGEEVETANLDFSQHSPT----------------------PVHLTKVPPSSAQTPSEVP 264
Query: 231 SCIEPQKDKRKKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHS 290
P K ++ K PD E +L+ + K+ + A +EKK +P+SI+ CI L
Sbjct: 265 ES-RPGKKQKIKSVSPD-DGFHERYLKLK-KEDIDRFAAIEEKKLEDPYSINKCITVLEG 321
Query: 291 MTDVSDQVKILASDVFKDAANREIFLSYDL-RLRTLWIKREVNRL 334
+ + ++A+D+FK NRE+FLS+ LR WI++E+ L
Sbjct: 322 LHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIRKEIAAL 366
>Os07g0115800
Length = 367
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 147/343 (42%), Gaps = 38/343 (11%)
Query: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
RARW + L+++L ++++ +RTQN W + W IV N ++ FT Q+++ E
Sbjct: 50 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKF-GTSFTTNQVKQKE 108
Query: 64 TQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPK-ARKYQFKSFPLLQSL 122
LK+DYR VK +L + G WD + M K A ++ KSFP L
Sbjct: 109 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 168
Query: 123 EVLFEGDIPEG------EHNLMPSKPQLAGRNVDEGGNNMSTAPS----IPGRPCSTVIA 172
L++G EG +H +K A + + +PS PG
Sbjct: 169 APLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPF 228
Query: 173 GIDDGENNIGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSC 232
G + N+ Q +P P H P SA P+
Sbjct: 229 GEEVETANLDFSQHSPT----------------------PVHLTKVPPSSAQTPSEVPES 266
Query: 233 IEPQKDKRKKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMT 292
P K ++ K PD E +L+ + K+ + A +EKK +P+SI+ CI L +
Sbjct: 267 -RPGKKQKIKSVSPD-DGFHERYLKLK-KEEIDRFAAIEEKKLEDPYSINKCITVLEGLH 323
Query: 293 DVSDQVKILASDVFKDAANREIFLSYDL-RLRTLWIKREVNRL 334
+ ++A+D+FK NRE+FLS+ LR WI++E+ L
Sbjct: 324 GLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIRKEIAAL 366
>Os09g0122200
Length = 467
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 149/338 (44%), Gaps = 28/338 (8%)
Query: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
RARW + L+++L ++++ +RTQN W + W IV N ++ FT Q+++ E
Sbjct: 50 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKF-GTSFTTNQVKQKE 108
Query: 64 TQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPK-ARKYQFKSFPLLQSL 122
LK+DYR VK +L + G WD + M K A ++ KSFP L
Sbjct: 109 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 168
Query: 123 EVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDGENNIG 182
L++G EG +D AP+ ST A + D +
Sbjct: 169 APLYDGRYAEGR----------TRHGMDHYARKTKNAPA-----HSTQEANVVDTYQSPS 213
Query: 183 ILQRTPELGQQGL-----DDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQK 237
P G+ GL ++V+ + P H P SA P+ P K
Sbjct: 214 PNSNAP--GESGLQFPFGEEVETANLDFSQHSPTPVHLTKVPPSSAQTPSEVPES-RPGK 270
Query: 238 DKRKKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMTDVSDQ 297
++ K PD E +L+ + K+ + A +EKK +P+SI+ CI L + +
Sbjct: 271 KQKIKSVSPD-DGFHERYLKLK-KEEIDRFAAIEEKKLEDPYSINKCITVLEGLHGLQIG 328
Query: 298 VKILASDVFKDAANREIFLSYDL-RLRTLWIKREVNRL 334
++A+D+FK NRE+FLS+ LR WI++E+ L
Sbjct: 329 DILVAADIFKGKDNREVFLSFSSDALRLAWIRKEIAAL 366
>Os03g0643100 Homeodomain-like containing protein
Length = 413
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 147/343 (42%), Gaps = 38/343 (11%)
Query: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
RARW + L+++L ++++ +RTQN W + W IV N ++ FT Q+++ E
Sbjct: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKF-GTSFTTNQVKQKE 154
Query: 64 TQLKRDYRLVKLILQREGVTWDQNASMXXXXXXXXXXXXXXMPK-ARKYQFKSFPLLQSL 122
LK+DYR VK +L + G WD + M K A ++ KSFP L
Sbjct: 155 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 214
Query: 123 EVLFEGDIPEG------EHNLMPSKPQLAGRNVDEGGNNMSTAPS----IPGRPCSTVIA 172
L++G EG +H +K A + + +PS PG
Sbjct: 215 APLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPF 274
Query: 173 GIDDGENNIGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSC 232
G + N+ Q +P P H P SA P+
Sbjct: 275 GEEVETANLDFSQHSPT----------------------PVHLTKVPPSSAQTPSEVPES 312
Query: 233 IEPQKDKRKKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMT 292
P K ++ K PD E +L+ + K+ + A +EKK +P+SI+ CI L +
Sbjct: 313 -RPGKKQKIKSVSPD-DGFHERYLKLK-KEEIDRFAAIEEKKLEDPYSINKCITVLEGLH 369
Query: 293 DVSDQVKILASDVFKDAANREIFLSYDL-RLRTLWIKREVNRL 334
+ ++A+D+FK NRE+FLS+ LR WI++E+ L
Sbjct: 370 GLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIRKEIAAL 412
>Os06g0190900 Intradiol ring-cleavage dioxygenase domain containing protein
Length = 472
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 33/240 (13%)
Query: 106 PKARKYQFKSFPLLQSLEVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPS-IP- 163
PKA+K++ KSFPL ++L L+ D+P + +P T PS IP
Sbjct: 249 PKAKKFRNKSFPLFEALGELY--DVPITQPFQVPV-----------------TQPSHIPL 289
Query: 164 GRPCSTVIAGIDD---GENNIGILQRTPELGQQGLDDVDILQNP-TEEVLERPQHGADPK 219
+P T A + GE+ + DD+ I++ P + R + G K
Sbjct: 290 TQPSQTSQATVTQHYMGEDENFPFDSHVHNAESDDDDLRIVEQPIASDAATRSRMG---K 346
Query: 220 PQSADEPAHSSSCIEPQKDKRKKRKVPDIQQTMEAFLEFRMKQARL----KEQAKKEKKD 275
++ H+ + + +K +++R+ + + M FLEF+ KQA +E+A+ +
Sbjct: 347 RVASATNKHAGTSDKTEKATQRRRQDGKVVEMMGKFLEFKEKQAETEIMQQERARSNVHE 406
Query: 276 GEPFSISTCIKALHSMTDVSDQVKILASDVFKDAANREIFLSYDLRLRTLWIKREVNRLL 335
E F I CI + SM D+SD K+LA DVFKD N IF+ R W++R++ L
Sbjct: 407 DE-FPIPVCIAVVDSMEDMSDDEKVLAYDVFKDPQNMAIFMIAKDSTRLKWLRRKITTAL 465
>Os07g0210800
Length = 384
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
RARW + L+++L ++++ +RTQN W + W IV N ++ FT Q+++ E
Sbjct: 150 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKF-GTSFTTNQVKQKE 208
Query: 64 TQLKRDYRLVKLILQREGVTWDQNASM 90
LK+DYR VK +L + G WD + M
Sbjct: 209 QDLKKDYRSVKDLLDQSGFGWDSDRMM 235
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,493,467
Number of extensions: 500645
Number of successful extensions: 1693
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 1677
Number of HSP's successfully gapped: 15
Length of query: 336
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 235
Effective length of database: 11,762,187
Effective search space: 2764113945
Effective search space used: 2764113945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)