BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0458300 Os04g0458300|AK059553
(380 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0458300 Similar to Non-cell-autonomous protein pathway2 655 0.0
Os02g0575800 Aldose 1-epimerase family protein 457 e-129
Os04g0458600 Similar to Non-cell-autonomous protein pathway2 442 e-124
Os03g0381000 Similar to Aldose 1-epimerase-like protein 377 e-105
Os10g0155500 Similar to Aldose 1-epimerase-like protein 300 8e-82
AK061152 300 1e-81
Os09g0108600 Similar to Aldose 1-epimerase-like protein 259 3e-69
AK110564 84 2e-16
>Os04g0458300 Similar to Non-cell-autonomous protein pathway2
Length = 380
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/352 (92%), Positives = 325/352 (92%)
Query: 29 ERKATTVGVYELRKGDFSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNSSTYF 88
ERKATTVGVYELRKGDFSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNSSTYF
Sbjct: 29 ERKATTVGVYELRKGDFSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNSSTYF 88
Query: 89 GALVGRVANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYI 148
GALVGRVANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYI
Sbjct: 89 GALVGRVANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYI 148
Query: 149 TLYYHSFDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWNLGGTG 208
TLYYHSFDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWNLGGTG
Sbjct: 149 TLYYHSFDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWNLGGTG 208
Query: 209 SGDILGNTVQLFASRYTPVDAELIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGGLSKTG 268
SGDILGNTVQLFASRYTPVDAELIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGGLSKTG
Sbjct: 209 SGDILGNTVQLFASRYTPVDAELIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGGLSKTG 268
Query: 269 ATIYGFDTNYXXXXXXXXXXXXXXLRRVTVVRDGKSGRSLELWANQPGVQFYTGNFLTAD 328
ATIYGFDTNY LRRVTVVRDGKSGRSLELWANQPGVQFYTGNFLTAD
Sbjct: 269 ATIYGFDTNYAVDGGDDVDAHAHALRRVTVVRDGKSGRSLELWANQPGVQFYTGNFLTAD 328
Query: 329 VXXXXXXXXXXXXXLCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFSF 380
V LCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFSF
Sbjct: 329 VKGKGGKAYGQYGALCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFSF 380
>Os02g0575800 Aldose 1-epimerase family protein
Length = 378
Score = 457 bits (1177), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/349 (66%), Positives = 263/349 (75%), Gaps = 9/349 (2%)
Query: 35 VGVYELRKGDFSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNSSTYFGALVGR 94
VGVYEL+KGDFSIRVTNWGA IMSV+LPDS+G L DVVLGYDT+AEYVN + YFG L+GR
Sbjct: 36 VGVYELKKGDFSIRVTNWGATIMSVILPDSKGNLADVVLGYDTVAEYVNGTAYFGGLIGR 95
Query: 95 VANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYITLYYHS 154
VANRIA ARF LDGK Y L+ NDG N+LHGGHRGFS V WTVKEHV GGD+P ITLYYHS
Sbjct: 96 VANRIANARFTLDGKTYRLFRNDGNNSLHGGHRGFSKVIWTVKEHVAGGDSPRITLYYHS 155
Query: 155 FDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWNLGGTGSG--DI 212
FDGEQGFPG LDV+VTY+L PYVL+V MNATA GKATPVNLA H+YWNL G GSG +
Sbjct: 156 FDGEQGFPGDLDVFVTYELPRPYVLAVRMNATARGKATPVNLAHHAYWNLAGEGSGAASV 215
Query: 213 LGNTVQLFASRYTPVDAE-LIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGGLSKTGATI 271
L TV++ ASRYTPVDA LIPTG+VAPV GTP D A PVGAR+ G + G +
Sbjct: 216 LAETVRIHASRYTPVDAATLIPTGRVAPVAGTPYDFLAGAPVGARIV----GAAVPGGAV 271
Query: 272 YGFDTNYXXXXXXXXXXXXXXLRRVTVVRDGKSGRSLELWANQPGVQFYTGNFLTADVXX 331
G+DTNY LR V VRDG +GR++E+WA+QPGVQFYT N L A V
Sbjct: 272 SGYDTNY-AVDGAAADGERRRLRPVAEVRDGATGRAMEVWADQPGVQFYTSNGL-AGVRG 329
Query: 332 XXXXXXXXXXXLCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFSF 380
LCLETQGFPDAVNHP+FPS IVRPGQVY+H MV+KF+F
Sbjct: 330 KGGRVYGRYGALCLETQGFPDAVNHPSFPSQIVRPGQVYEHNMVFKFTF 378
>Os04g0458600 Similar to Non-cell-autonomous protein pathway2
Length = 362
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/348 (63%), Positives = 256/348 (73%), Gaps = 17/348 (4%)
Query: 34 TVGVYELRKGDFSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNSSTYFGALVG 93
TVG Y LRKGDFS+++TNWGA +MSVVLPDS+G L DVVLG DTIAEY N + YFG + G
Sbjct: 31 TVGEYVLRKGDFSVKITNWGATMMSVVLPDSKGNLADVVLGLDTIAEY-NDTNYFGPVTG 89
Query: 94 RVANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYITLYYH 153
RV RIA+ RFVLDGK YH Y NDG+N +HGGHRGFS V WTVKE+VGGGD+PYITLYY
Sbjct: 90 RVGQRIARGRFVLDGKVYHTYINDGRNAIHGGHRGFSKVIWTVKEYVGGGDSPYITLYYR 149
Query: 154 SFDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWNLGGTGSGDIL 213
SFDGEQGFPG LD YVTYQLS PYVL++ MNATA KATPVN QH+YWNLGG G GD+L
Sbjct: 150 SFDGEQGFPGDLDAYVTYQLSSPYVLALRMNATALNKATPVNFLQHTYWNLGGQGRGDVL 209
Query: 214 GNTVQLFASRYTPVDAELIP-TGQVAPVTGTPCDLRAPTPVGARVHLVTGGLSKTGATIY 272
G+T+QL ASRYTP+ EL+P +G VAPV GTP D R PTP+GAR+ V GG I
Sbjct: 210 GHTLQLSASRYTPLHEELLPSSGVVAPVAGTPYDFRHPTPIGARIRQVMGG------RIA 263
Query: 273 GFDTNYXXXXXXXXXXXXXXLRRVTVVRDGKSGRSLELWANQPGVQFYTGNFLTADVXXX 332
G+D NY +R+V RDG SGR+LELWANQP +Q YTGN+L ++
Sbjct: 264 GYDINY--------VIDGEGMRKVAAARDGASGRALELWANQPAMQLYTGNWLN-NIKGK 314
Query: 333 XXXXXXXXXXLCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFSF 380
CLETQG+ DAVNHP FPS+ VRPGQVY+H+M +KFSF
Sbjct: 315 GGKVYQQYGGFCLETQGYVDAVNHPEFPSMTVRPGQVYRHDMAFKFSF 362
>Os03g0381000 Similar to Aldose 1-epimerase-like protein
Length = 376
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/349 (57%), Positives = 236/349 (67%), Gaps = 17/349 (4%)
Query: 34 TVGVYELRKGDFSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNSSTYFGALVG 93
++G YELR+G+FS+ VTNWGA I++V LPD G +DDVVLGY I YVN +TYFGALVG
Sbjct: 40 SIGFYELRRGEFSVVVTNWGATILTVNLPDKNGHIDDVVLGYKDIGSYVNDTTYFGALVG 99
Query: 94 RVANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYITLYYH 153
RVANRIA RF + G A+H Y NDGKNTLHGGHRGF+ V W+V+E G PYIT YY
Sbjct: 100 RVANRIAGGRFTVKGHAFHTYKNDGKNTLHGGHRGFNQVFWSVRERA-TGHFPYITFYYR 158
Query: 154 SFDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAA--GKATPVNLAQHSYWNLGGTGSGD 211
S+DGEQGFPGALDV VTY++ G Y SV M A GK TPVNLAQH+YWNL G G+G
Sbjct: 159 SYDGEQGFPGALDVLVTYKIDGDYSFSVTMYARPVDDGKPTPVNLAQHTYWNLRGHGNGT 218
Query: 212 ILGNTVQLFASRYTPVDAELIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGGLSKTGATI 271
IL ++VQ+FAS TPV A LIPTG V+PV+GTP D RAP P GAR+ V GG
Sbjct: 219 ILDHSVQIFASAVTPVGAGLIPTGAVSPVSGTPFDFRAPAPPGARIADVPGG-------- 270
Query: 272 YGFDTNYXXXXXXXXXXXXXXLRRVTVVRDGKSGRSLELWANQPGVQFYTGNFLTADVXX 331
G+D NY +R+ VV + SGR LELW++QPG+QFYTGNFL D
Sbjct: 271 -GYDINY----VLDGEADGQGVRKAAVVSEPTSGRVLELWSDQPGLQFYTGNFLKGD-EG 324
Query: 332 XXXXXXXXXXXLCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFSF 380
LCLETQ +PDAV++ FP+ I R GQ YKH M+YKFS
Sbjct: 325 KGGARYVKHGGLCLETQDYPDAVHNAKFPTEIYRKGQEYKHYMLYKFSL 373
>Os10g0155500 Similar to Aldose 1-epimerase-like protein
Length = 362
Score = 300 bits (769), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 151/344 (43%), Positives = 206/344 (59%), Gaps = 18/344 (5%)
Query: 37 VYELRKGDFSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNS-STYFGALVGRV 95
+ EL G + ++ WGA I S+++PD+ G L DVVLG+DT+ Y+ S YFG +VGRV
Sbjct: 35 ILELSNGRITAKIAAWGATITSLIVPDAHGNLADVVLGFDTLEPYMKGISPYFGCIVGRV 94
Query: 96 ANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYITLYYHSF 155
ANRI + +F L+G Y L N+G N+LHGG +GF V W V E + P IT YHS
Sbjct: 95 ANRIKEGKFTLNGVEYSLAINNGPNSLHGGLKGFDKVVWDVVER--KSECPSITFQYHSK 152
Query: 156 DGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWNLGGTGSGDILGN 215
DGE+G+PG + V TY L L + M A A KATP+NLAQH+YWNL G SGD L +
Sbjct: 153 DGEEGYPGDVTVRATYSLPDSTTLRLDMEAVAENKATPINLAQHTYWNLAGHNSGDTLDH 212
Query: 216 TVQLFASRYTPVDAELIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGGLSKTGATIYGFD 275
++Q++ TPVD IPTG++ PV GTP D +GAR++ V G G+D
Sbjct: 213 SIQIWGKHITPVDENTIPTGEIMPVKGTPFDFTTEHKIGARINDVPG----------GYD 262
Query: 276 TNYXXXXXXXXXXXXXXLRRVTVVRDGKSGRSLELWANQPGVQFYTGNFLTADVXXXXXX 335
NY L+ ++D + R+L+LW + PG+QFYT N++ V
Sbjct: 263 HNY----VLDSGEEKNGLKHAAKLKDSSNSRTLDLWTDAPGMQFYTANYVDG-VTGKGGA 317
Query: 336 XXXXXXXLCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFS 379
+CLETQGFP+A+N PNFPSV+V+PG+ YKH M+++FS
Sbjct: 318 VYGKHSGVCLETQGFPNAINQPNFPSVVVQPGEKYKHTMLFEFS 361
>AK061152
Length = 333
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/344 (43%), Positives = 206/344 (59%), Gaps = 18/344 (5%)
Query: 37 VYELRKGDFSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNS-STYFGALVGRV 95
+ EL G + ++ WGA I S+++PD+ G L DVVLG+DT+ Y+ S YFG +VGRV
Sbjct: 6 ILELSNGRITAKIAAWGATITSLIVPDAHGNLADVVLGFDTLEPYMKGISPYFGCIVGRV 65
Query: 96 ANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYITLYYHSF 155
ANRI + +F L+G Y L N+G N+LHGG +GF V W V E + P IT YHS
Sbjct: 66 ANRIKEGKFTLNGVEYSLAINNGPNSLHGGLKGFDKVVWDVVER--KSECPSITFQYHSK 123
Query: 156 DGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWNLGGTGSGDILGN 215
DGE+G+PG + V TY L L + M A A KATP+NLAQH+YWNL G SGD L +
Sbjct: 124 DGEEGYPGDVTVRATYSLPDSTTLRLDMEAVAENKATPINLAQHTYWNLAGHNSGDTLDH 183
Query: 216 TVQLFASRYTPVDAELIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGGLSKTGATIYGFD 275
++Q++ TPVD IPTG++ PV GTP D +GAR++ V G G+D
Sbjct: 184 SIQIWGKHITPVDENTIPTGEIMPVKGTPFDFTTEHKIGARINDVPG----------GYD 233
Query: 276 TNYXXXXXXXXXXXXXXLRRVTVVRDGKSGRSLELWANQPGVQFYTGNFLTADVXXXXXX 335
NY L+ ++D + R+L+LW + PG+QFYT N++ V
Sbjct: 234 HNY----VLDSGEEKNGLKHAAKLKDSSNSRTLDLWTDAPGMQFYTANYVDG-VTGKGGA 288
Query: 336 XXXXXXXLCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFS 379
+CLETQGFP+A+N PNFPSV+V+PG+ YKH M+++FS
Sbjct: 289 VYGKHSGVCLETQGFPNAINQPNFPSVVVQPGEKYKHTMLFEFS 332
>Os09g0108600 Similar to Aldose 1-epimerase-like protein
Length = 288
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 177/296 (59%), Gaps = 16/296 (5%)
Query: 84 SSTYFGALVGRVANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGG 143
+S YFG +VGRVANRI +F L+ K Y L N+ NTLHGG +GF + W V E+V G
Sbjct: 7 TSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYVKG- 65
Query: 144 DAPYITLYYHSFDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWN 203
+ P IT Y+S DGE+GFPG + V Y + L + M A KATP++LAQH+YWN
Sbjct: 66 ENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQHTYWN 125
Query: 204 LGGTGSGDILGNTVQLFASRYTPVDAELIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGG 263
L G SGD+L +TVQ+ S+ TPVD IPTG++ PV+G+P + T +G+R+ V G
Sbjct: 126 LAGHNSGDVLAHTVQILGSQITPVDETSIPTGEMMPVSGSPFNFLTETTIGSRIDQVPG- 184
Query: 264 LSKTGATIYGFDTNYXXXXXXXXXXXXXXLRRVTVVRDGKSGRSLELWANQPGVQFYTGN 323
G+D N+ L V V D S R L++WA+ PGVQFYTGN
Sbjct: 185 ---------GYDHNF----VIDCGEVKSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGN 231
Query: 324 FLTADVXXXXXXXXXXXXXLCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFS 379
FL + LCLETQGFP+AVN PNFPSV+V+PG+ Y H M+++FS
Sbjct: 232 FLNG-IVGKGGAVYGKHAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFS 286
>AK110564
Length = 377
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 141/364 (38%), Gaps = 35/364 (9%)
Query: 36 GVYELRKGDFSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNSSTY--FGALVG 93
G Y L + + A + ++ + D G D+VLGYD + Y + + A+ G
Sbjct: 25 GRYTLEAEGIKAQFIPYAATLTNLWVKDKNGVQRDIVLGYDNTSYYPVDPGHPVYNAIPG 84
Query: 94 RVANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGGDAPYITLYYH 153
R NRI + +D YH NDG NTLH G +S W V V + L
Sbjct: 85 RYVNRIGNGEYSIDNVTYHTQKNDGPNTLHSGTNNWSFRNWDVTS-VTNSSITFSIL--D 141
Query: 154 SFDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWNLGGTGSGD-- 211
+ G G + VTY +S S+ M+A + + TP+ L QH+Y+ L D
Sbjct: 142 KSNSSLGMIGDVSASVTYTVS-KNKWSIVMDAESKDQKTPIMLTQHTYFQLDAFARPDNR 200
Query: 212 -ILGNTVQL-FASRYTPVDAELIPTGQVAPVT-GTPCDL-RAPTPVGARVHLVTGGL--- 264
I +T+ + A R D +PTG +A V+ G D AP +G +G
Sbjct: 201 TIWNHTMYMPEAKRVMLADGNALPTGVIANVSAGDISDFWSAPHELG----FASGNANFE 256
Query: 265 SKTGATIYGFDTNYXXXXXXXXXXXXXXLRRVTVVRDGKSGRSLELWANQPGVQFYTGN- 323
+ G +G++ N+ V + SG +L +Q V YT N
Sbjct: 257 NNCGNGCHGYNGNWAFNDSRNKS------ETVLTLSSEWSGIKADLVTDQDAVVLYTCNW 310
Query: 324 ------FLTADVXXXXXXXXXXXXXLCLETQGFPDAVNHPNFPSV---IVRPGQVYKHEM 374
F + + +E Q + D +NHP + + I GQ Y
Sbjct: 311 NDGKTEFKSTQGVTGQDKFIPRDGCIAIEAQDYVDGINHPEWGRLGKQIFAKGQQYHWAS 370
Query: 375 VYKF 378
+ F
Sbjct: 371 SWTF 374
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,398,852
Number of extensions: 548304
Number of successful extensions: 983
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 957
Number of HSP's successfully gapped: 8
Length of query: 380
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 277
Effective length of database: 11,657,759
Effective search space: 3229199243
Effective search space used: 3229199243
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)