BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0450900 Os04g0450900|AK067842
(470 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0450900 Protein kinase PKN/PRK1, effector domain conta... 788 0.0
Os02g0572600 Protein kinase PKN/PRK1, effector domain conta... 307 9e-84
Os08g0481100 Conserved hypothetical protein 189 4e-48
Os03g0189300 Conserved hypothetical protein 174 2e-43
>Os04g0450900 Protein kinase PKN/PRK1, effector domain containing protein
Length = 470
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/470 (85%), Positives = 402/470 (85%)
Query: 1 MRQKVSEMEEELRKEKDAAEKVQLLQREVEKAKESERKMLESLIYQTKQLEQTKISLEEA 60
MRQKVSEMEEELRKEKDAAEKVQLLQREVEKAKESERKMLESLIYQTKQLEQTKISLEEA
Sbjct: 1 MRQKVSEMEEELRKEKDAAEKVQLLQREVEKAKESERKMLESLIYQTKQLEQTKISLEEA 60
Query: 61 KLEITTXXXXXXXXXXXXXXXXXXXXXXXXXQRSVKDLVFGGGDDEIRALRCELRTAMQG 120
KLEITT QRSVKDLVFGGGDDEIRALRCELRTAMQG
Sbjct: 61 KLEITTLQQANASLEASAAAAVVSRRGGAVEQRSVKDLVFGGGDDEIRALRCELRTAMQG 120
Query: 121 EEKSRKALDDLSVALSDVTMEAKQVKMWXXXXXXXXXXXXXXXXXXXXXXDAAEARLRDV 180
EEKSRKALDDLSVALSDVTMEAKQVKMW DAAEARLRDV
Sbjct: 121 EEKSRKALDDLSVALSDVTMEAKQVKMWLSEAQAELEAANAEAERLRHELDAAEARLRDV 180
Query: 181 SDEHDRCRLDAEECAAAWGDKERVLLDCVRASEEEVNRERQENTKLVESQRVIRDENARL 240
SDEHDRCRLDAEECAAAWGDKERVLLDCVRASEEEVNRERQENTKLVESQRVIRDENARL
Sbjct: 181 SDEHDRCRLDAEECAAAWGDKERVLLDCVRASEEEVNRERQENTKLVESQRVIRDENARL 240
Query: 241 RDILKQAVAEANVVKESLELARGENARLNDVVAEKDGALQSLRQEYECIKVSEAAAQGSL 300
RDILKQAVAEANVVKESLELARGENARLNDVVAEKDGALQSLRQEYECIKVSEAAAQGSL
Sbjct: 241 RDILKQAVAEANVVKESLELARGENARLNDVVAEKDGALQSLRQEYECIKVSEAAAQGSL 300
Query: 301 KELNSLLXXXXXXXXXXXXXXXXXXXXXVADYGFDQHLPSVRLVSSAKGTPEAASHRWTA 360
KELNSLL VADYGFDQHLPSVRLVSSAKGTPEAASHRWTA
Sbjct: 301 KELNSLLAATTTTTATACSTPASARTASVADYGFDQHLPSVRLVSSAKGTPEAASHRWTA 360
Query: 361 ADKSRTPSSRRYSIGEPAKFKGGFSQSARMGNLNHKDRVFASLSNIADLKSAAEAAMSDF 420
ADKSRTPSSRRYSIGEPAKFKGGFSQSARMGNLNHKDRVFASLSNIADLKSAAEAAMSDF
Sbjct: 361 ADKSRTPSSRRYSIGEPAKFKGGFSQSARMGNLNHKDRVFASLSNIADLKSAAEAAMSDF 420
Query: 421 DDEFDHVDESHYDSMDQSMKQKKKRPILRKFGDLFRRKSFYKANLAPVHT 470
DDEFDHVDESHYDSMDQSMKQKKKRPILRKFGDLFRRKSFYKANLAPVHT
Sbjct: 421 DDEFDHVDESHYDSMDQSMKQKKKRPILRKFGDLFRRKSFYKANLAPVHT 470
>Os02g0572600 Protein kinase PKN/PRK1, effector domain containing protein
Length = 495
Score = 307 bits (787), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 202/450 (44%), Positives = 253/450 (56%), Gaps = 46/450 (10%)
Query: 20 EKVQLLQREVEKAKESERKMLESLIYQTKQLEQTKISLEEAKLEITTXXXXXXXXXXXXX 79
++V+LL+REV AK +E MLESLI QTK++EQ KI+LEEAKLE+ T
Sbjct: 88 DRVRLLEREVATAKATEMNMLESLIQQTKEMEQAKIALEEAKLEVATLRQQQGRAPAAEP 147
Query: 80 XXXXXXXXXXXXQRSVKDLVFGGGDDEIRALRCELRTAMQGEEKSRKALDDLSVALSDVT 139
Q SV DL+FGG D+EI LR +LR A+Q EEKSRKA DDL+ ALS VT
Sbjct: 148 AAAA--------QWSVMDLMFGGVDEEINGLRAKLRAAVQAEEKSRKAADDLTAALSAVT 199
Query: 140 MEAKQVKMWXXXXXXXXXXXXXXXXXXXXXXDAAEARLRDVSDEHDRCRLDAEECAAAWG 199
MEAKQVK W AAEA L +++ D D +E A +W
Sbjct: 200 MEAKQVKAWLSDAQAELEDANAEVDRLRESLHAAEAELWSTTEQLDGLTSDWKEAAVSWR 259
Query: 200 DKERVLLDCVRASEEEVNRERQENTKLVESQRVIRDENARLRDILKQAVAEANVVKESLE 259
+E+VLL VRA+E+E + QEN +L E RV+ DEN LR L++AV E N ESLE
Sbjct: 260 AREKVLLARVRAAEDEAHAAGQENVELAELHRVVDDENGSLRRALERAVEEVNAANESLE 319
Query: 260 LARGENARLNDVVAEKDGALQSLRQEYECIKVSEAAAQGSLKELNSLLXXXXXXXXXXXX 319
LA GEN++L D VAEK+ A+++LRQE E +K SEA A+G KEL+ L
Sbjct: 320 LATGENSKLQDAVAEKESAMEALRQENESLKASEAEARGRAKELDGQL------------ 367
Query: 320 XXXXXXXXXVADYGFDQHLPSVRLVSSAKGTPEAASHRWTAADKSRTPSSRRYSIGEPAK 379
AD+G + L ++A P ++ H+W K
Sbjct: 368 ----AAARKAADHGHG----AGELAAAAD--PLSSLHKWRG--------------DMHGK 403
Query: 380 FKGGFSQSARMGNLNHKDRVFASLSNIADLKS-AAEAAMSDFDDEFDHVDESHYDSMDQS 438
F S R+ KDR+FASLSNIA+LKS AA AAM DFD EFDH D Y +D +
Sbjct: 404 LSATFLDSNRV-MAGRKDRMFASLSNIAELKSAAAAAAMDDFDYEFDHFDGGQYGDLDHA 462
Query: 439 MKQKKKRPILRKFGDLFRRKSFYKANLAPV 468
MKQKK+R ILRKFGD FRR+S YK NLAPV
Sbjct: 463 MKQKKRRSILRKFGDFFRRRSLYKRNLAPV 492
>Os08g0481100 Conserved hypothetical protein
Length = 434
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 177/293 (60%), Gaps = 2/293 (0%)
Query: 17 DAAEKVQLLQREVEKAKESERKMLESLIYQTKQLEQTKISLEEAKLEITTXXXXXXXXXX 76
D +++ L+ E E A++SE+K+L SL QTKQLEQTK+SLEEAKLEI +
Sbjct: 77 DLVHRLEQLEGEQEAARDSEKKLLVSLGAQTKQLEQTKVSLEEAKLEIASLKDNKKSSEA 136
Query: 77 -XXXXXXXXXXXXXXXQRSVKDLVFG-GGDDEIRALRCELRTAMQGEEKSRKALDDLSVA 134
+R + F G+ E +L+ EL+ A++ EEK +KA+DDL++A
Sbjct: 137 FSALSSNPSQPARNLRRRGIMSFSFADPGEVETWSLQRELKLAVEAEEKCKKAMDDLAIA 196
Query: 135 LSDVTMEAKQVKMWXXXXXXXXXXXXXXXXXXXXXXDAAEARLRDVSDEHDRCRLDAEEC 194
L + T +A+ K E +L+ +E + + +++E
Sbjct: 197 LKEQTTDARDAKAKLSLAQSELTNARTEMENSKALLKNTEEKLQVALEEAAQLKFESDEL 256
Query: 195 AAAWGDKERVLLDCVRASEEEVNRERQENTKLVESQRVIRDENARLRDILKQAVAEANVV 254
AAA +KER L+DC++ E ++ + ++EN KL+ESQRVIRDEN+RLR++LK AV EANV
Sbjct: 257 AAASKEKERGLVDCIKMFEGDLIKAKEENNKLIESQRVIRDENSRLREMLKHAVCEANVA 316
Query: 255 KESLELARGENARLNDVVAEKDGALQSLRQEYECIKVSEAAAQGSLKELNSLL 307
KESLE+AR EN++L + ++EK+ LQS+ Q+YE +KVSE+AAQ S+ EL ++
Sbjct: 317 KESLEIARAENSQLKEDISEKENTLQSIIQDYESLKVSESAAQSSIGELKDMI 369
>Os03g0189300 Conserved hypothetical protein
Length = 477
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 214/449 (47%), Gaps = 70/449 (15%)
Query: 22 VQLLQREVEKAKESERKMLESLIYQTKQLEQTKISLEEAKLEITTXXXXXXXXXXXXXXX 81
++ L+ E++ ++ESE++MLESL QTKQLE TKI LEEA+LE +
Sbjct: 86 IETLEAELDASRESEKRMLESLAMQTKQLEMTKIELEEARLENASLRETIQRLEAIAV-- 143
Query: 82 XXXXXXXXXXQRSVKDLVFGGGDDEIRALRCELRTAMQGEEKSRKALDDLSVALSDVTME 141
V G D + + + ELR A+ E+K++KA+++L +AL +V E
Sbjct: 144 ------------PVATTPRGRYDRDYQRVHGELRMALVAEDKNKKAMEELVLALKEVNGE 191
Query: 142 AKQVKMWXXXXXXXXXXXXXXXXXXXXXXDAAEARLRDVSDEHDRCRLDAEECAAAWGDK 201
+ + +LR +S+E R R DAEE AAW K
Sbjct: 192 LHTTRQLLARSQHEAETARLESDRLHVSLKRKDDKLRALSEEVARLRADAEESFAAWRGK 251
Query: 202 ERVLLDCVRASEEEVNRERQENTKLVESQRVIRDENARLRDILKQAVAEANVVKESLELA 261
E C++++E E+ R+EN +L+ESQR RDE A+LRDIL+QAV + VVKE+LE A
Sbjct: 252 EAGFTSCMKSTESELAETRRENARLLESQRSGRDEIAKLRDILRQAVKDTKVVKEALEEA 311
Query: 262 RGENARLNDVVAEKDGALQSLRQEYECIKVSEAAAQGSLKELNSLLXXXXXXXXXXXXXX 321
RGENA L +++ +KD A++ +QE EC++V+EAAA+ S+KEL SLL
Sbjct: 312 RGENAALKEMLGDKDTAIKCTKQELECLRVTEAAARDSVKELQSLLVATSSSPT------ 365
Query: 322 XXXXXXXVADYGFDQHLPSVRLVSSAKGTPEAASHRWTAADKSRTPSSRRYS-------- 373
+ + SA +P A+ + D S + SR
Sbjct: 366 ------------------AAGMKLSASPSPTASGIKLDMEDSSSSHGSRELHGLIKCHSE 407
Query: 374 --IGEPAKFKGGFSQSARMGNLNHKDRVFASLSNIADLKSAAEAAMSDFDDEFDHVDESH 431
+ PA G + R + N + V+ ++ D KS A
Sbjct: 408 ARVKPPA----GLTLPRRRSD-NFEGSVYDIFGSMEDQKSELSA---------------- 446
Query: 432 YDSMDQSMKQKKKRPILRKFGDLFRRKSF 460
+ +M +S+ ++R ++RK G LFR KSF
Sbjct: 447 FSTMPRSLPA-RRRVMMRKVGSLFRFKSF 474
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.126 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,857,580
Number of extensions: 414837
Number of successful extensions: 2336
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2324
Number of HSP's successfully gapped: 4
Length of query: 470
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 366
Effective length of database: 11,605,545
Effective search space: 4247629470
Effective search space used: 4247629470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)