Os08g0481100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0481100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 234.78 | 0.72 | 7.08 | 1.38 | 1.38 | 1.28 | -0.0701 | -2.83 | 0.0631 | 20.5 | 20.5 | 753 | 6.32 | -- |
| 250.79 | 0.738 | 7.01 | 1.84 | 1.34 | 1.39 | 0.284 | -- | 0.169 | 20.7 | 20.6 | 970 | 7.85 | -- |
| 234.79 | 0.714 | 7.08 | 1.39 | 1.38 | 1.28 | -- | -2.81 | 0.0641 | 20.5 | 20.52 | 753 | 6.37 | -- |
| 250.92 | 0.738 | 7.02 | 1.8 | 1.33 | 1.39 | -- | -- | 0.165 | 20.7 | 20.6 | 975 | 7.93 | -- |
| 284.46 | 0.79 | 6.97 | 1.91 | -- | 1.07 | -- | -1.34 | 0.248 | -- | 20.52 | 753 | 6.37 | -- |
| 292.6 | 0.802 | 6.94 | 2.21 | 1.01 | -- | -0.578 | -- | 0.434 | 23 | -- | -- | -- | -- |
| 293.94 | 0.803 | 6.94 | 2.23 | 1.02 | -- | -- | -- | 0.437 | 22.9 | -- | -- | -- | -- |
| 287.53 | 0.79 | 6.99 | 1.41 | -- | 1.99 | -- | -- | 0.105 | -- | 19.7 | 1856 | 8.43 | -- |
| 299.72 | 0.806 | 6.97 | -- | 1.17 | 2.51 | -- | -- | 0.0405 | 21.1 | 19.9 | 2611 | 10 | -- |
| 358.15 | 0.884 | 6.92 | 2.25 | -- | -- | -- | -- | 0.444 | -- | -- | -- | -- | -- |
| 425.31 | 0.965 | 7 | -- | 1.04 | -- | -- | -- | 0.188 | 23 | -- | -- | -- | -- |
| 312.33 | 0.823 | 7.08 | -- | -- | 2.98 | -- | -- | -0.196 | -- | 19.4 | 3385 | 10.5 | -- |
| 492.2 | 1.04 | 6.97 | -- | -- | -- | -- | -- | 0.194 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.77 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 11 |
| 2 | 234.97 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 8 |
| 8 | 235.49 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 24 | 238.10 | temperature | 20 | 720 | > th | dose independent | sin | 12 | NA |
| 27 | 238.63 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 30 | 238.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 3 |
| 32 | 238.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 35 | 238.99 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 56 | 239.78 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 64 | 239.97 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 80 | 240.60 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 82 | 240.73 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 143 | 242.86 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 154 | 243.24 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 161 | 243.44 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 181 | 244.05 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 182 | 244.10 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 187 | 244.19 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 344 | 247.41 | wind | 3 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 347 | 247.43 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 375 | 247.84 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 405 | 248.20 | radiation | 20 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 428 | 248.44 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 453 | 248.84 | temperature | 20 | 720 | < th | dose independent | sin | 12 | NA |
| 511 | 249.44 | wind | 5 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 517 | 249.50 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 527 | 249.60 | wind | 5 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 566 | 249.92 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 16 | 19 |
| 567 | 249.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 608 | 250.34 | temperature | 20 | 720 | < th | dose independent | rect. | 12 | 19 |
| 610 | 250.37 | atmosphere | 1010 | 90 | < th | dose dependent | sin | 10 | NA |
| 619 | 250.47 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 635 | 250.61 | wind | 7 | 4320 | > th | dose independent | sin | 13 | NA |
| 645 | 250.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 11 |
| 669 | 250.83 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 19 | 15 |
| 684 | 250.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 689 | 250.97 | wind | 7 | 4320 | < th | dose independent | sin | 13 | NA |
| 711 | 251.17 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 1 | 10 |
| 733 | 251.34 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 18 | 7 |
| 741 | 251.43 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 748 | 251.48 | wind | 7 | 4320 | > th | dose dependent | sin | 13 | NA |
| 760 | 251.58 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 19 | 4 |
| 791 | 251.85 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 21 | 2 |
| 809 | 251.97 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 827 | 252.06 | humidity | 90 | 14400 | > th | dose dependent | sin | 8 | NA |
| 834 | 252.10 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 952 | 252.86 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 959 | 252.89 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 13 | 21 |