BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0353600 Os04g0353600|J013127I15
(136 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0353600 Similar to Fatty acyl coA reductase 273 2e-74
Os04g0354600 Similar to Acyl CoA reductase-like protein 254 2e-68
Os07g0489100 177 3e-45
Os09g0567500 Similar to Fatty acyl coA reductase 159 5e-40
Os08g0557800 Similar to Fatty acyl coA reductase 144 3e-35
Os03g0167600 Similar to Male sterility protein 2 106 4e-24
Os04g0355300 Similar to Fatty acyl coA reductase 106 6e-24
>Os04g0353600 Similar to Fatty acyl coA reductase
Length = 136
Score = 273 bits (699), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT 60
METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT
Sbjct: 1 METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT 60
Query: 61 EVVGNGLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGA 120
EVVGNGLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGA
Sbjct: 61 EVVGNGLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGA 120
Query: 121 ATTNFMERYIYISLED 136
ATTNFMERYIYISLED
Sbjct: 121 ATTNFMERYIYISLED 136
>Os04g0354600 Similar to Acyl CoA reductase-like protein
Length = 499
Score = 254 bits (648), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/129 (96%), Positives = 127/129 (98%)
Query: 1 METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT 60
METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT
Sbjct: 1 METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT 60
Query: 61 EVVGNGLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGA 120
EVVG GLFDVLREQYGAGF+SFIKEKIYALPGDV HENFGLESY++LQLSQKVDIIVNGA
Sbjct: 61 EVVGKGLFDVLREQYGAGFNSFIKEKIYALPGDVMHENFGLESYEVLQLSQKVDIIVNGA 120
Query: 121 ATTNFMERY 129
ATTNFMERY
Sbjct: 121 ATTNFMERY 129
>Os07g0489100
Length = 475
Score = 177 bits (448), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 107/129 (82%)
Query: 1 METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT 60
M+ +A F+DK+ILITG+TGFLGK+ VEKILR+QP+V+K++LLVRA D +AE+RVL
Sbjct: 1 MDAATVAGYFKDKSILITGSTGFLGKIFVEKILRIQPDVKKIFLLVRAADTSSAEQRVLN 60
Query: 61 EVVGNGLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGA 120
EV+GN LF LRE YG+ F+SF+KEKI L GD+ +EN GLES +IL+LS+++DIIVNGA
Sbjct: 61 EVIGNELFGPLRENYGSNFYSFMKEKISPLAGDIINENLGLESLEILKLSKEIDIIVNGA 120
Query: 121 ATTNFMERY 129
ATTNF ERY
Sbjct: 121 ATTNFYERY 129
>Os09g0567500 Similar to Fatty acyl coA reductase
Length = 505
Score = 159 bits (402), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 101/129 (78%)
Query: 1 METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT 60
M+ I E F++K+ILITG+TGFLGK+LVEKILRVQP+VRK+YL VRA DA A++R+ T
Sbjct: 5 MDEARIIEYFKNKSILITGSTGFLGKILVEKILRVQPDVRKIYLPVRAVDAATAKQRMQT 64
Query: 61 EVVGNGLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGA 120
EV+G LF +L+EQ+G GF SFI EK+ L D+ H+N GLE + +L++ ++IIVNGA
Sbjct: 65 EVIGKELFGLLKEQHGKGFQSFIDEKVVPLAADMMHQNLGLEESTLQELAKDLNIIVNGA 124
Query: 121 ATTNFMERY 129
ATTNF ERY
Sbjct: 125 ATTNFYERY 133
>Os08g0557800 Similar to Fatty acyl coA reductase
Length = 509
Score = 144 bits (362), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 95/124 (76%)
Query: 6 IAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLTEVVGN 65
I E F+ K+ILITGATGFLGK+LVEKILRVQP+V+K+YLLVRA D +A +RV +EV
Sbjct: 12 IIEYFKGKSILITGATGFLGKILVEKILRVQPDVKKIYLLVRAIDQASANQRVQSEVTET 71
Query: 66 GLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGAATTNF 125
LF V++E++G GF FI+EK+ AL GD+ +++ GL+ + L+ +D+IVNGAATTNF
Sbjct: 72 ELFSVVKEKHGKGFSRFIEEKVVALAGDIIYDDLGLDPPLLQHLADNLDVIVNGAATTNF 131
Query: 126 MERY 129
RY
Sbjct: 132 YGRY 135
>Os03g0167600 Similar to Male sterility protein 2
Length = 608
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 77/124 (62%)
Query: 6 IAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLTEVVGN 65
IAE K LITG TGFL K+L+EKILR P+V K+Y+L++A D AA +R+ EVV
Sbjct: 85 IAEFLGGKNFLITGGTGFLAKVLIEKILRTNPDVGKIYVLIKAKDGDAALKRLHNEVVDT 144
Query: 66 GLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGAATTNF 125
LF L+E +G +HSF K+ + GDV N G+ ++ +VDIIVN AA T F
Sbjct: 145 ELFSRLQEIHGKDYHSFAARKLVPVVGDVREANVGIAPELAGVIADEVDIIVNSAANTTF 204
Query: 126 MERY 129
ERY
Sbjct: 205 DERY 208
>Os04g0355300 Similar to Fatty acyl coA reductase
Length = 127
Score = 106 bits (264), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Query: 1 METGGIAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLT 60
ME G IAERFRD++ILITG+TGFL K+LVEKILR+QP+VRKLYLLVRAPDA AA+ER+LT
Sbjct: 1 MEPGSIAERFRDRSILITGSTGFLAKMLVEKILRIQPDVRKLYLLVRAPDAAAAKERLLT 60
Query: 61 EVVGNGLFDVLREQYGAGFHSFIKEKIYALPGDVTH-ENFGLES 103
E +F E + K YAL + + + GLE+
Sbjct: 61 EEKDYLMFC---ENNTVHLSTLSSRKKYALYLETSRIKTLGLET 101
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.142 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,158,689
Number of extensions: 158234
Number of successful extensions: 406
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 406
Number of HSP's successfully gapped: 7
Length of query: 136
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 46
Effective length of database: 12,336,541
Effective search space: 567480886
Effective search space used: 567480886
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 150 (62.4 bits)