Os04g0355300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fatty acyl coA reductase.
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Os04g0355300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fatty acyl coA reductase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.6 | 0.35 | 2.9 | -0.58 | 0.0323 | 0.712 | 0.249 | -6.23 | 0.0295 | 10.1 | 30.2 | 12 | -- | -- |
| 60.7 | 0.366 | 2.85 | -0.125 | 0.053 | 0.0571 | 0.183 | -- | 0.0368 | 9.79 | 30.2 | 12 | -- | -- |
| 55.84 | 0.348 | 2.9 | -0.573 | 0.0342 | 0.715 | -- | -6.22 | 0.026 | 8.8 | 30.2 | 12 | -- | -- |
| 60.57 | 0.362 | 2.85 | -0.123 | 0.0522 | 0.118 | -- | -- | 0.041 | 9.28 | 30.3 | 8 | -- | -- |
| 55.91 | 0.348 | 2.9 | -0.574 | -- | 0.715 | -- | -6.23 | 0.0286 | -- | 30.2 | 12 | -- | -- |
| 60.8 | 0.366 | 2.86 | -0.119 | 0.0569 | -- | 0.173 | -- | 0.0318 | 10.6 | -- | -- | -- | -- |
| 60.92 | 0.366 | 2.86 | -0.112 | 0.056 | -- | -- | -- | 0.0325 | 11.1 | -- | -- | -- | -- |
| 60.7 | 0.363 | 2.86 | -0.124 | -- | 0.114 | -- | -- | 0.0383 | -- | 30.08 | 12 | -- | -- |
| 60.95 | 0.364 | 2.85 | -- | 0.0507 | 0.102 | -- | -- | 0.051 | 9.39 | 30.1 | 12 | -- | -- |
| 61.11 | 0.365 | 2.86 | -0.113 | -- | -- | -- | -- | 0.0321 | -- | -- | -- | -- | -- |
| 61.25 | 0.366 | 2.85 | -- | 0.0571 | -- | -- | -- | 0.045 | 11.2 | -- | -- | -- | -- |
| 61.1 | 0.364 | 2.85 | -- | -- | 0.104 | -- | -- | 0.0514 | -- | 30.08 | 12 | -- | -- |
| 61.45 | 0.366 | 2.85 | -- | -- | -- | -- | -- | 0.0446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.83 | temperature | 30 | 10 | > th | dose independent | rect. | 13 | 23 |
| 2 | 56.62 | temperature | 30 | 30 | > th | dose independent | rect. | 11 | 4 |
| 57 | 56.97 | radiation | 20 | 10 | > th | dose independent | rect. | 13 | 1 |
| 97 | 57.07 | temperature | 30 | 10 | > th | dose independent | sin | 1 | NA |
| 106 | 57.09 | radiation | 10 | 90 | < th | dose independent | rect. | 10 | 1 |
| 109 | 57.10 | temperature | 30 | 10 | < th | dose independent | rect. | 1 | 23 |
| 176 | 57.16 | temperature | 30 | 10 | > th | dose independent | no | NA | NA |
| 302 | 57.58 | temperature | 30 | 10 | > th | dose dependent | sin | 6 | NA |
| 304 | 57.60 | temperature | 30 | 30 | < th | dose independent | sin | 4 | NA |
| 306 | 57.61 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 2 |
| 310 | 57.62 | wind | 1 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 333 | 57.67 | temperature | 30 | 10 | > th | dose independent | rect. | 11 | 1 |
| 350 | 57.70 | radiation | 40 | 270 | < th | dose independent | rect. | 11 | 1 |
| 411 | 57.75 | temperature | 30 | 10 | > th | dose independent | rect. | 14 | 1 |
| 433 | 57.76 | temperature | 30 | 10 | < th | dose independent | rect. | 23 | 23 |
| 434 | 57.76 | radiation | 10 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 731 | 58.04 | temperature | 30 | 10 | < th | dose independent | no | NA | NA |
| 751 | 58.06 | wind | 1 | 90 | < th | dose independent | rect. | 13 | 1 |
| 757 | 58.07 | wind | 9 | 90 | > th | dose independent | rect. | 13 | 2 |
| 760 | 58.08 | wind | 9 | 90 | > th | dose dependent | rect. | 13 | 2 |
| 769 | 58.12 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 783 | 58.12 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 805 | 58.17 | radiation | 40 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 836 | 58.21 | radiation | 30 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 924 | 58.43 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 11 | 3 |
| 951 | 58.47 | radiation | 40 | 270 | < th | dose independent | rect. | 21 | 15 |
| 965 | 58.52 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 3 |