BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0809300 Os03g0809300|AK103140
(479 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0809300 Protein phosphatase 2C-like domain containing ... 874 0.0
Os10g0370000 Protein phosphatase 2C-like domain containing ... 172 4e-43
AK072473 166 5e-41
Os03g0192500 Protein phosphatase 2C-like domain containing ... 165 7e-41
Os02g0633900 138 9e-33
Os01g0164600 Protein phosphatase 2C-like domain containing ... 136 3e-32
Os02g0633700 119 3e-27
>Os03g0809300 Protein phosphatase 2C-like domain containing protein
Length = 479
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/479 (89%), Positives = 429/479 (89%)
Query: 1 MLAXXXXXXXXXXXXFNLASYKYKDPXXXXXXXXXXXXNTWFLLSTYPARLLHTXXXXXX 60
MLA FNLASYKYKDP NTWFLLSTYPARLLHT
Sbjct: 1 MLAGGGSRVSGGGGGFNLASYKYKDPLLGRGGRSFLFGNTWFLLSTYPARLLHTADRRAP 60
Query: 61 XXXXXXINRTPCVRTHCTGQSLLQRGIVMAACGYAFRRAELGAAKRQPEKDSSVGTRISC 120
INRTPCVRTHCTGQSLLQRGIVMAACGYAFRRAELGAAKRQPEKDSSVGTRISC
Sbjct: 61 AAFFAAINRTPCVRTHCTGQSLLQRGIVMAACGYAFRRAELGAAKRQPEKDSSVGTRISC 120
Query: 121 VVAMGSAGSTPRPEVSFRHRGVEYCKKVGVSLKCREPWGPSRAFWTNAIGPSYKLSFSVE 180
VVAMGSAGSTPRPEVSFRHRGVEYCKKVGVSLKCREPWGPSRAFWTNAIGPSYKLSFSVE
Sbjct: 121 VVAMGSAGSTPRPEVSFRHRGVEYCKKVGVSLKCREPWGPSRAFWTNAIGPSYKLSFSVE 180
Query: 181 PWLRDFSTSCVAPYSAGATEHQLSLDEAVQDKQMDNSTVGPDGKPRAPGPLKLVSGSCYL 240
PWLRDFSTSCVAPYSAGATEHQLSLDEAVQDKQMDNSTVGPDGKPRAPGPLKLVSGSCYL
Sbjct: 181 PWLRDFSTSCVAPYSAGATEHQLSLDEAVQDKQMDNSTVGPDGKPRAPGPLKLVSGSCYL 240
Query: 241 PHPAKEATGGEDGHFICVDEQAIGVADGVGGWADHGVDAGLYAKELMSNSMSAIKDEPQG 300
PHPAKEATGGEDGHFICVDEQAIGVADGVGGWADHGVDAGLYAKELMSNSMSAIKDEPQG
Sbjct: 241 PHPAKEATGGEDGHFICVDEQAIGVADGVGGWADHGVDAGLYAKELMSNSMSAIKDEPQG 300
Query: 301 TIDPSRVLEKAYTCTKARGSSTACIVALKEQGIHAVNLGDSGFIIVRDGRTVLRSPVQQH 360
TIDPSRVLEKAYTCTKARGSSTACIVALKEQGIHAVNLGDSGFIIVRDGRTVLRSPVQQH
Sbjct: 301 TIDPSRVLEKAYTCTKARGSSTACIVALKEQGIHAVNLGDSGFIIVRDGRTVLRSPVQQH 360
Query: 361 DFNFTYQLESGGGSDLPSSAQTFHFPVAPGDVIIAGTDGLFDNLYSNEISAIVVEALRTG 420
DFNFTYQLESGGGSDLPSSAQTFHFPVAPGDVIIAGTDGLFDNLYSNEISAIVVEALRTG
Sbjct: 361 DFNFTYQLESGGGSDLPSSAQTFHFPVAPGDVIIAGTDGLFDNLYSNEISAIVVEALRTG 420
Query: 421 LEPEXXXXXXXXXXXXXXMDRNRQSPFAAAAQEAGYRYFGGKLDDITVIVSYVTSASAT 479
LEPE MDRNRQSPFAAAAQEAGYRYFGGKLDDITVIVSYVTSASAT
Sbjct: 421 LEPEATAKKIAALAQQKAMDRNRQSPFAAAAQEAGYRYFGGKLDDITVIVSYVTSASAT 479
>Os10g0370000 Protein phosphatase 2C-like domain containing protein
Length = 465
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 140/253 (55%), Gaps = 9/253 (3%)
Query: 225 PRAPGPLKLVSGSCYLPHPAKEATGGEDGHFICVDEQAIGVADGVGGWADHGVDAGLYAK 284
P A L L SG+ LPHP+K ATGGED +FI D GVADGVG W+ G++AGLYA+
Sbjct: 213 PVASSTLVLASGAAILPHPSKAATGGEDAYFIACDGW-FGVADGVGQWSFEGINAGLYAR 271
Query: 285 ELMSNSMSAIKDEPQGTID--PSRVLEKAYTCTKARGSSTACIVALKEQGIHAVNLGDSG 342
ELM I E QG D P +VL KA + GSST + Q ++A N+GDSG
Sbjct: 272 ELMDGCKKFIM-ENQGAADIKPEQVLSKAADEAHSPGSSTVLVAHFDGQFLNASNIGDSG 330
Query: 343 FIIVRDGRTVLRSPVQQHDFNFTYQLESGGGSDLP-SSAQTFHFPVAPGDVIIAGTDGLF 401
F+++R+G +S + FNF Q+E G D P Q + + GDVI+ +DGLF
Sbjct: 331 FLVIRNGEVYQKSKPMVYGFNFPLQIEKG---DNPLKLVQNYTIELEDGDVIVTASDGLF 387
Query: 402 DNLYSNEISAIVVEALRTGLEPEXXXXXXXXXXXXXXMDRNRQSPFAAAAQEAGYRYF-G 460
DN+Y E++ +V ++L+ L+P +PF+ AA GY F G
Sbjct: 388 DNVYEQEVATMVSKSLQADLKPTEIAEHLAAKAQEVGRSAAGSTPFSDAALAVGYLGFSG 447
Query: 461 GKLDDITVIVSYV 473
GKLDDI V+VS V
Sbjct: 448 GKLDDIAVVVSIV 460
>AK072473
Length = 781
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 131/238 (55%), Gaps = 7/238 (2%)
Query: 231 LKLVSGSCYLPHPAKEATGGEDGHFICVDEQAIGVADGVGGWADHGVDAGLYAKELMSNS 290
L L SG+ LPHP+K TGGED +FI D GVADGVG W+ G++AGLYA+ELM
Sbjct: 321 LILASGAAMLPHPSKVLTGGEDAYFIACD-GWFGVADGVGQWSFEGINAGLYARELMDGC 379
Query: 291 MSAIKDEPQGT--IDPSRVLEKAYTCTKARGSSTACIVALKEQGIHAVNLGDSGFIIVRD 348
A+ E QG + VL KA ++ GSST + Q +HA N+GDSGF+++R+
Sbjct: 380 KKAVM-ERQGAPEMRTEEVLAKAADEARSPGSSTVLVAHFDGQVLHACNIGDSGFLVIRN 438
Query: 349 GRTVLRSPVQQHDFNFTYQLESGGGSDLPSSAQTFHFPVAPGDVIIAGTDGLFDNLYSNE 408
G +S + FNF Q+E G D Q + + GD I+ TDGLFDN+Y E
Sbjct: 439 GEIYQKSKPMTYGFNFPLQIEK--GDDPFKLVQKYTIDLQEGDAIVTATDGLFDNVYEEE 496
Query: 409 ISAIVVEALRTGLEPEXXXXXXXXXXXXXXMDRNRQSPFAAAAQEAGYR-YFGGKLDD 465
I+A++ ++L GL+P +SPF+ AA GY Y GGKLDD
Sbjct: 497 IAAVISKSLEAGLKPSEIAEFLVARAKEVGRSATCRSPFSDAALAVGYLGYSGGKLDD 554
>Os03g0192500 Protein phosphatase 2C-like domain containing protein
Length = 569
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 131/238 (55%), Gaps = 7/238 (2%)
Query: 231 LKLVSGSCYLPHPAKEATGGEDGHFICVDEQAIGVADGVGGWADHGVDAGLYAKELMSNS 290
L L SG+ LPHP+K TGGED +FI D GVADGVG W+ G++AGLYA+ELM
Sbjct: 323 LILASGAAMLPHPSKVLTGGEDAYFIACD-GWFGVADGVGQWSFEGINAGLYARELMDGC 381
Query: 291 MSAIKDEPQGT--IDPSRVLEKAYTCTKARGSSTACIVALKEQGIHAVNLGDSGFIIVRD 348
A+ E QG + VL KA ++ GSST + Q +HA N+GDSGF+++R+
Sbjct: 382 KKAVM-ESQGAPEMRTEEVLAKAADEARSPGSSTVLVAHFDGQVLHACNIGDSGFLVIRN 440
Query: 349 GRTVLRSPVQQHDFNFTYQLESGGGSDLPSSAQTFHFPVAPGDVIIAGTDGLFDNLYSNE 408
G +S + FNF Q+E G D Q + + GD I+ TDGLFDN+Y E
Sbjct: 441 GEIYQKSKPMTYGFNFPLQIEK--GDDPFKLVQKYTIDLQEGDAIVTATDGLFDNVYEEE 498
Query: 409 ISAIVVEALRTGLEPEXXXXXXXXXXXXXXMDRNRQSPFAAAAQEAGYR-YFGGKLDD 465
I+A++ ++L GL+P +SPF+ AA GY Y GGKLDD
Sbjct: 499 IAAVISKSLEAGLKPSEIAEFLVARAKEVGRSATCRSPFSDAALAVGYLGYSGGKLDD 556
>Os02g0633900
Length = 315
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 130/251 (51%), Gaps = 14/251 (5%)
Query: 231 LKLVSGSCYLPHPAKEATGGEDGHFICVDEQAIGVADGVGGWADHGVDAGLYAKELMSNS 290
L++ + SC+LP ED HF+ + + +ADGVGG+ GVDA +A+ LM N+
Sbjct: 72 LRMEAASCFLPDH------DEDTHFVRPEAGVVALADGVGGYRAPGVDAAAFARALMYNA 125
Query: 291 MS-AIKDEPQGT--IDPSRVLEKAY---TCTKARGSSTACIVALKEQGIHAVNLGDSGFI 344
+ P G I P +L AY + +G+STA I++L + +GDS F
Sbjct: 126 FEMVVATTPGGAGGICPYALLGWAYEQAVSARTQGASTAVILSLAGATLKYAYIGDSAFA 185
Query: 345 IVRDGRTVLRSPVQQHDFNFTYQLESGGGSDLPSSAQTFHFPVAPGDVIIAGTDGLFDNL 404
+ RDG+ RS Q H FN+ +QL G+ + S+A+ V GDV++AGTDGLFDN+
Sbjct: 186 VFRDGKLFFRSEAQVHSFNYPFQLSVKNGNSVTSAARG-GVEVKEGDVVVAGTDGLFDNV 244
Query: 405 YSNEISAIVVEALRTGLEPEXXXXXXXXXXXXXXMDRNRQSPFAAAA-QEAGYRYFGGKL 463
S E+ IV GL P+ R +PF+ + ++ G + GK
Sbjct: 245 TSEELQRIVAMGRALGLSPKQTADVVAGFAYEASTTMGRDTPFSLESRKKQGTIFRRGKR 304
Query: 464 DDITVIVSYVT 474
DDITV+V+Y+
Sbjct: 305 DDITVVVAYIV 315
>Os01g0164600 Protein phosphatase 2C-like domain containing protein
Length = 331
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 135/254 (53%), Gaps = 18/254 (7%)
Query: 233 LVSGSCYLPHPAKEATGGEDGHFICVDEQAI-GVADGVGGWADHGVDAGLYAKELMSNSM 291
L G+ +PHP K TGGED F+ D+ + VADGV GWA+ V+ L+++ELM+++
Sbjct: 44 LTIGTHLIPHPRKAETGGEDAFFVNGDDGGVFAVADGVSGWAEKDVNPALFSRELMAHTS 103
Query: 292 SAIKDEPQGTIDPSRVLEKAYTCTKARGSSTACIVALKEQGIHAV-NLGDSGFIIVRDGR 350
+ +KDE + DP +L KA+ T + GS+T I L++ GI + ++GD G ++R G+
Sbjct: 104 TFLKDE-EVNHDPQLLLMKAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVIRKGQ 162
Query: 351 TVLRSPVQQHDFNFTYQLESGGGSDLPSSAQTFHFPVAPGDVIIAGTDGLFDNLYSNEIS 410
+ + Q+H F+ YQL S A + GD+I++G+DG FDN++ EI
Sbjct: 163 VMFSTCPQEHYFDCPYQLSSEAIGQTYLDALVCTVNLMEGDMIVSGSDGFFDNIFDQEIV 222
Query: 411 AIVVEALRTGLEPEXXXXXXXXXXXXXXMDRNRQSPFAAAAQEAGY-----------RYF 459
+++ E+ + +D SP++ A+ G+ +
Sbjct: 223 SVISESPGV----DEAAKALAELARKHSVDVTFDSPYSMEARSRGFDVPSWKKFIGGKLI 278
Query: 460 GGKLDDITVIVSYV 473
GGK+DDITVIV+ V
Sbjct: 279 GGKMDDITVIVAQV 292
>Os02g0633700
Length = 319
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 132/259 (50%), Gaps = 24/259 (9%)
Query: 231 LKLVSGSCYLPHPAKEATGGEDGHFICVDEQAIGVADGVGGWADH-GVDAGLYAKELMSN 289
+++ S SCY+P ED HF+ A GV VGG+ GVDAG +++ LM++
Sbjct: 74 VRMESASCYVPDH------DEDAHFV---HDAAGV---VGGYRRRVGVDAGAFSRGLMTS 121
Query: 290 SMSA-IKDEPQGTIDPSRVLEKAYTCT---KARGSSTACIVALKEQGI-HAVNLGDSGFI 344
+ + + EP + P +LE+AY T A+G STA I++L + + +GDS F
Sbjct: 122 AFAQLVTAEPGTPVCPYTLLERAYEETLESGAQGGSTAVILSLADGNVLRWAYIGDSAFA 181
Query: 345 IVRDGRTVLRSPVQQHDFNFTYQLESGGGSDLPSSAQTFHFPVAPGDVIIAGTDGLFDNL 404
++RDGR V+RS QQ FN Y L G + + V GDV++AGTDGLFDN+
Sbjct: 182 VLRDGRVVVRSVQQQRYFNAPYYLGGRRGDEGMTVGMVGEMKVRRGDVVVAGTDGLFDNM 241
Query: 405 YSNEISAIVVEALRTGLEPEXXXXXXXXXXXXXXMDRNRQSPFAAA-----AQEAGYRYF 459
E+ +V G P+ + SPFA E G+ ++
Sbjct: 242 SDAELEKVVQIGTALGFSPKNMADIIGGTAYEMSRCLLKDSPFAVEWRKQHENEEGH-FY 300
Query: 460 GGKLDDITVIVSYVTSASA 478
GGK+DDITV+V+ + S+ +
Sbjct: 301 GGKVDDITVVVACIVSSDS 319
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,717,831
Number of extensions: 693464
Number of successful extensions: 1601
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1581
Number of HSP's successfully gapped: 7
Length of query: 479
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 374
Effective length of database: 11,553,331
Effective search space: 4320945794
Effective search space used: 4320945794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)