BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0767000 Os03g0767000|AK068620
(512 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0767000 Similar to Allene oxide synthase (EC 4.2.1.92) 912 0.0
Os03g0225900 Allene oxide synthase 415 e-116
Os02g0218800 Similar to Allene oxide synthase (EC 4.2.1.92) 382 e-106
Os02g0218700 Similar to Allene oxide synthase (EC 4.2.1.92) 348 4e-96
Os02g0110200 Similar to Hydroperoxide lyase 294 1e-79
>Os03g0767000 Similar to Allene oxide synthase (EC 4.2.1.92)
Length = 512
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/512 (89%), Positives = 457/512 (89%)
Query: 1 MATAAACISFASPSPARVVIRRQTRXXXXXXXTDRQEVVSPKRRLPLRKVPGDYGPPVVG 60
MATAAACISFASPSPARVVIRRQTR TDRQEVVSPKRRLPLRKVPGDYGPPVVG
Sbjct: 1 MATAAACISFASPSPARVVIRRQTRASASASATDRQEVVSPKRRLPLRKVPGDYGPPVVG 60
Query: 61 AIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRVVALLDAASFPVLF 120
AIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRVVALLDAASFPVLF
Sbjct: 61 AIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRVVALLDAASFPVLF 120
Query: 121 DTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKF 180
DTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKF
Sbjct: 121 DTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKF 180
Query: 181 REVYGDLFGLMENDLARVGKADFGVHNDAAAFGFLCQGLLGRDPAKSALGRDGPKLITKW 240
REVYGDLFGLMENDLARVGKADFGVHNDAAAFGFLCQGLLGRDPAKSALGRDGPKLITKW
Sbjct: 181 REVYGDLFGLMENDLARVGKADFGVHNDAAAFGFLCQGLLGRDPAKSALGRDGPKLITKW 240
Query: 241 VXXXXXXXXXXXXXXXVEDTLLHSLRLPPALVKKDYDRLADFFRDAAKAVVDEGERLGIA 300
V VEDTLLHSLRLPPALVKKDYDRLADFFRDAAKAVVDEGERLGIA
Sbjct: 241 VLFQLSPLLSLGLPTLVEDTLLHSLRLPPALVKKDYDRLADFFRDAAKAVVDEGERLGIA 300
Query: 301 REEAVHNILFALCFNSFGGMKILFPTLVKWLGRAGARVHGRLATEVRGAVRDNGGEVTMK 360
REEAVHNILFALCFNSFGGMKILFPTLVKWLGRAGARVHGRLATEVRGAVRDNGGEVTMK
Sbjct: 301 REEAVHNILFALCFNSFGGMKILFPTLVKWLGRAGARVHGRLATEVRGAVRDNGGEVTMK 360
Query: 361 ALAEMPLVKSAVYEALRIEPPVAMQYGRAKRDMVVESHDYGYEVREGEMLFGYQPMATKD 420
ALAEMPLVKSAVYEALRIEPPVAMQYGRAKRDMVVESHDYGYEVREGEMLFGYQPMATKD
Sbjct: 361 ALAEMPLVKSAVYEALRIEPPVAMQYGRAKRDMVVESHDYGYEVREGEMLFGYQPMATKD 420
Query: 421 PRVFARPEEYVPDRFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDXXXXXXXXXXX 480
PRVFARPEEYVPDRFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKD
Sbjct: 421 PRVFARPEEYVPDRFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLV 480
Query: 481 XXXXXYDSFDXXXXXXXXXXXXXXXXXKKATF 512
YDSFD KKATF
Sbjct: 481 ELFLRYDSFDVEVGTSTLGSSVTVTSLKKATF 512
>Os03g0225900 Allene oxide synthase
Length = 478
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/448 (51%), Positives = 297/448 (66%), Gaps = 4/448 (0%)
Query: 45 LPLRKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARD 104
LP R VPG YG P V A+RDR +++Y G+D +F +R + STVVR+N+PPGPF+ARD
Sbjct: 7 LPRRPVPGSYGVPFVSAVRDRLDFYY-LQGQDKYFESRAERYGSTVVRINVPPGPFMARD 65
Query: 105 PRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTL 164
PRVVALLDA SFPVLFD + V+K D+FTGTFMPST LTGGYRV +YLDPSEPNHA +K L
Sbjct: 66 PRVVALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQL 125
Query: 165 LFYLLSHRRQQVIPKFREVYGDLFGLMENDLARVG-KADFGVHNDAAAFGFLCQGLLGRD 223
L LL R+ +P FR +G L +E+ LA G K+DF NDA +F F+ + G
Sbjct: 126 LLSLLVSRKDAFVPVFRSNFGALLDTVESQLASGGGKSDFTALNDATSFEFIGEAYFGVR 185
Query: 224 P-AKSALGRDGPKLITKWVXXXXXXXXXXXXXXXVEDTLLHSLRLPPALVKKDYDRLADF 282
P A S+LG GP W+ +ED LLH+L LPP L+ DY L +
Sbjct: 186 PSASSSLGTGGPTKAALWLLWQLAPLTTLGLPMIIEDPLLHTLPLPPFLISSDYKALYAY 245
Query: 283 FRDAAKAVVDEGERLGIAREEAVHNILFALCFNSFGGMKILFPTLVKWLGRAGARVHGRL 342
F AA +D E LG++REEA HN+LFA FNS+GG K+L P ++ + +AG ++H RL
Sbjct: 246 FAAAASQALDAAEGLGLSREEACHNLLFATVFNSYGGFKLLLPQILSRVAQAGEKLHERL 305
Query: 343 ATEVRGAVRDNGGEVTMKALAEMPLVKSAVYEALRIEPPVAMQYGRAKRDMVVESHDYGY 402
A E+R AV D GG VT+ AL +M L +S V+EALR++PPV QYGRAK D+ +ESHD +
Sbjct: 306 AAEIRSAVADAGGNVTLAALEKMELTRSVVWEALRLDPPVRFQYGRAKADLEIESHDASF 365
Query: 403 EVREGEMLFGYQPMATKDPRVF-ARPEEYVPDRFLGEDGARLLRHVVWSNGPETAAPTLH 461
+++GEMLFGYQP AT+DPRVF A E+V DRF+GE+G +LL++V WSNG ET P++
Sbjct: 366 AIKKGEMLFGYQPCATRDPRVFGATAREFVGDRFVGEEGRKLLQYVYWSNGRETENPSVD 425
Query: 462 DKQCAGKDXXXXXXXXXXXXXXXXYDSF 489
+KQC GK+ YD+F
Sbjct: 426 NKQCPGKNLVVLVGRLLLVELFLRYDTF 453
>Os02g0218800 Similar to Allene oxide synthase (EC 4.2.1.92)
Length = 510
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/462 (46%), Positives = 285/462 (61%), Gaps = 10/462 (2%)
Query: 36 QEVVSPKRRLPLRKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHR-STVVRLN 94
Q +SP L +R++PG YG P + +RDR +Y+Y G D FF +RV H +TV+R+N
Sbjct: 19 QSKLSPSGLL-IREIPGGYGVPFLSPLRDRLDYYYFQGA-DEFFRSRVARHGGATVLRVN 76
Query: 95 MPPGPFVARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPS 154
MPPGPF+A DPRVVALLDA SF VL D S+VDK D GTFMPS L GG+R L++LD +
Sbjct: 77 MPPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFLDAA 136
Query: 155 EPNHAPLKTLLFYLLSHRRQQVIPKFREVYGDLFGLMENDLARVGKADFGVHNDAAAFGF 214
+P HA +K ++ L + R V P FR + +F ++ L G +F N F
Sbjct: 137 DPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDEVDAGLVAGGPVEFNKLNMRYMLDF 196
Query: 215 LCQGLLGRDPAKSALGRDGPKLITKW-VXXXXXXXXXXXXXXXVEDTLLHSLRLPPALVK 273
C L G P A+G KW + +ED LLH+ RLPP LV+
Sbjct: 197 TCAALFGGAPPSKAMGDAAVTKAVKWLIFQLHPLASKVVKPWPLEDLLLHTFRLPPFLVR 256
Query: 274 KDYDRLADFFRDAAKAVVDEGERL--GIAREEAVHNILFALCFNSFGGMKILFPTLVKWL 331
++Y + +F AA A++D+ E+ GI R+E +HN++F FN++GG KI P +VKWL
Sbjct: 257 REYGEITAYFAAAAAAILDDAEKNHPGIPRDELLHNLVFVAVFNAYGGFKIFLPHIVKWL 316
Query: 332 GRAGARVHGRLATEVRGAVRDNGGEVTMKAL-AEMPLVKSAVYEALRIEPPVAMQYGRAK 390
RAG +H +LA+EVR A GGE+T+ A+ EMPLVKS V+EALR+ PPV QYGRA+
Sbjct: 317 ARAGPELHAKLASEVRAAAPAGGGEITISAVEKEMPLVKSVVWEALRMNPPVEFQYGRAR 376
Query: 391 RDMVVESHDYGYEVREGEMLFGYQPMATKDPRVFARPEEYVPDRFLGEDGAR---LLRHV 447
RDMVVESHD YEVR+GE+LFGYQP+AT+D +VF R E+VPDRF+ G+ LL HV
Sbjct: 377 RDMVVESHDAAYEVRKGELLFGYQPLATRDEKVFDRAGEFVPDRFVSGAGSAARPLLEHV 436
Query: 448 VWSNGPETAAPTLHDKQCAGKDXXXXXXXXXXXXXXXXYDSF 489
VWSNGPET P+ +KQC GKD YD+F
Sbjct: 437 VWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTF 478
>Os02g0218700 Similar to Allene oxide synthase (EC 4.2.1.92)
Length = 500
Score = 348 bits (894), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 214/467 (45%), Positives = 281/467 (60%), Gaps = 16/467 (3%)
Query: 33 TDRQEVVSPKRRLPLRKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHR-STVV 91
T + +SP LP+R++PG YG P +RDR +YFY G + +F +RV H +TV+
Sbjct: 16 TGEKSKLSPSG-LPIREIPGGYGVPFFSPLRDRLDYFYFQGAEE-YFRSRVARHGGATVL 73
Query: 92 RLNMPPGPFVARDPRVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYL 151
R+NMPPGPF++ +PRVVALLDA SF VL D S+VDK D GT+MPS L GG+R L++L
Sbjct: 74 RVNMPPGPFISGNPRVVALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFL 133
Query: 152 DPSEPNHAPLKTLLFYLLSHRRQQVIPKFREVYGDLFGLMENDLARVGKADFGVHNDAAA 211
D ++P HA +K ++ L + R V P FR + +F +E L +F N
Sbjct: 134 DAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFAAMFDAVEAGLG--AAVEFNKLNMRYM 191
Query: 212 FGFLCQGLLGRDPAKSALGRDGPKLITKWVXXXXX-XXXXXXXXXXVEDTLLHSLRLPPA 270
F C L G +P +G W+ +E+ LLH+ LPP
Sbjct: 192 LDFTCAALFGGEPPSKVVGDGAVTKAMAWLAFQLHPIASKVVKPWPLEELLLHTFSLPPF 251
Query: 271 LVKKDYDRLADFFRDAAKAVVDEGER--LGIAREEAVHNILFALCFNSFGGMKILFPTLV 328
LV++ Y L +F DAA AV+D+ E+ GI R+E + N++F FN+FGG KI P +V
Sbjct: 252 LVRRGYADLKAYFADAAAAVLDDAEKSHTGIPRDELLDNLVFVAIFNAFGGFKIFLPHIV 311
Query: 329 KWLGRAGARVHGRLATEVRGAV---RDNGGEVTMKALAEMPLVKSAVYEALRIEPPVAMQ 385
KWL RAG +H +LATEVR V D+G +T+ A+ MPLVKS V+EALR+ PPV Q
Sbjct: 312 KWLARAGPELHAKLATEVRATVPTGEDDG--ITLAAVERMPLVKSVVWEALRMNPPVEFQ 369
Query: 386 YGRAKRDMVVESHDYGYEVREGEMLFGYQPMATKDPRVFARPEEYVPDRFL--GEDGAR- 442
YG A+RDMVVESHD YEVR+GEMLFGYQP+AT+D +VF R E+V DRF+ G G R
Sbjct: 370 YGHARRDMVVESHDAAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVADRFVAGGAAGDRP 429
Query: 443 LLRHVVWSNGPETAAPTLHDKQCAGKDXXXXXXXXXXXXXXXXYDSF 489
LL HVVWSNGPET AP+ +KQC GKD YD+F
Sbjct: 430 LLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTF 476
>Os02g0110200 Similar to Hydroperoxide lyase
Length = 487
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 188/456 (41%), Positives = 250/456 (54%), Gaps = 14/456 (3%)
Query: 48 RKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGP--FVARDP 105
R +PG YGPP++G +RDR +YF+ G D FF R H+STV R N+PP F+ DP
Sbjct: 16 RPIPGSYGPPLLGPLRDRLDYFWF-QGPDDFFRRRAADHKSTVFRANIPPTFPFFLGVDP 74
Query: 106 RVVALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLL 165
RVVA++DAA+F LFD +LVDK D+ G ++PS T G RV YLD +P+HA K
Sbjct: 75 RVVAVVDAAAFTALFDPALVDKRDVLIGPYVPSLAFTRGTRVGVYLDTQDPDHARTKAFS 134
Query: 166 FYLLSHRRQQVIPKFREVYGDLFGLMENDLARVGKAD-----FGVHNDAAAFGFLCQGLL 220
LL + + R D+ +E DL R + + F FLC+ L+
Sbjct: 135 IDLLRRAARNWAAELRAAVDDMLAAVEEDLNRAPDPAAASASYLIPLQKCIFRFLCKALV 194
Query: 221 GRDPAKSAL-GRDGPKLITKWVXXXXXXXXXX-XXXXXVEDTLLHSLRLPPALVKKDYDR 278
G DPA L R G ++ W+ +E+ LLHS LP +VK YD
Sbjct: 195 GADPAADGLVDRFGVYILDVWLALQLVPTQKVGVIPQPLEELLLHSFPLPSFVVKPGYDL 254
Query: 279 LADFFRDAAKAVVDEGER-LGIAREEAVHNILFALCFNSFGGMKILFPTLVKWLGRAGAR 337
L F A V E+ GI++EEA++NILF L FN+FGG + P LV +G+ G
Sbjct: 255 LYRFVEKHGAAAVSIAEKEHGISKEEAINNILFVLGFNAFGGFSVFLPFLVMEVGKPGRD 314
Query: 338 VHGRLATEVRGAVRDNGGEVTMKA--LAEMPLVKSAVYEALRIEPPVAMQYGRAKRDMVV 395
R E V G + EM LV+S VYE LR++PPV +Q+GRA+RD V+
Sbjct: 315 DLRRRLREEVRRVLGGGDGGEAGFAAVREMALVRSTVYEVLRMQPPVPLQFGRARRDFVL 374
Query: 396 ESHD-YGYEVREGEMLFGYQPMATKDPRVFARPEEYVPDRFLGEDGARLLRHVVWSNGPE 454
SH YEV +GE+L GYQP+A +DP VF RPEE+VP+RFLG+DG LL++V WSNGPE
Sbjct: 375 RSHGGAAYEVGKGELLCGYQPLAMRDPAVFDRPEEFVPERFLGDDGEALLQYVYWSNGPE 434
Query: 455 TAAPTLHDKQCAGKDXXXXXXXXXXXXXXXXYDSFD 490
T P+ +KQCA K+ YD F+
Sbjct: 435 TGEPSPGNKQCAAKEVVVATACMLVAELFRRYDDFE 470
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.140 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,345,887
Number of extensions: 758472
Number of successful extensions: 1744
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1732
Number of HSP's successfully gapped: 5
Length of query: 512
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 407
Effective length of database: 11,553,331
Effective search space: 4702205717
Effective search space used: 4702205717
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)