Os03g0767000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Allene oxide synthase (EC 4.2.1.92).
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Os03g0767000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Allene oxide synthase (EC 4.2.1.92).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.24 | 0.473 | 11 | 0.656 | 1.22 | 0.32 | 0.504 | 1.65 | 0.829 | 22.6 | 1000 | 10 | -- | -- |
| 102.96 | 0.476 | 11 | 0.769 | 1.23 | 0.611 | 0.52 | -- | 0.827 | 22.6 | 1000 | 13 | -- | -- |
| 103.78 | 0.474 | 11 | 0.606 | 1.23 | 0.245 | -- | 2.1 | 0.83 | 22.6 | 1000 | 7 | -- | -- |
| 104.08 | 0.478 | 11 | 0.749 | 1.22 | 0.614 | -- | -- | 0.826 | 22.6 | 1000 | 11 | -- | -- |
| 194.62 | 0.653 | 11 | 0.309 | -- | -0.606 | -- | 7.27 | 0.83 | -- | 999.8 | 13 | -- | -- |
| 113.48 | 0.499 | 11 | 0.658 | 1.23 | -- | 0.541 | -- | 0.869 | 22.7 | -- | -- | -- | -- |
| 114.7 | 0.502 | 11 | 0.636 | 1.23 | -- | -- | -- | 0.868 | 22.7 | -- | -- | -- | -- |
| 195.35 | 0.654 | 11 | 0.778 | -- | 0.683 | -- | -- | 0.83 | -- | 999.8 | 22 | -- | -- |
| 118.4 | 0.51 | 11 | -- | 1.23 | 0.489 | -- | -- | 0.753 | 22.7 | 1000 | 11 | -- | -- |
| 207.79 | 0.674 | 11 | 0.659 | -- | -- | -- | -- | 0.874 | -- | -- | -- | -- | -- |
| 125.35 | 0.524 | 11 | -- | 1.23 | -- | -- | -- | 0.797 | 22.7 | -- | -- | -- | -- |
| 210.84 | 0.678 | 11 | -- | -- | 0.553 | -- | -- | 0.755 | -- | 999.8 | 22 | -- | -- |
| 219.25 | 0.691 | 11 | -- | -- | -- | -- | -- | 0.801 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.08 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 11 | 100.89 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 53 | 101.90 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 59 | 101.98 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 60 | 102.03 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 9 | 19 |
| 63 | 102.13 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 67 | 102.19 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 68 | 102.22 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 92 | 102.57 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 93 | 102.59 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 16 | 23 |
| 120 | 102.76 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 19 | 20 |
| 160 | 103.06 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 194 | 103.20 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 195 | 103.20 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 201 | 103.23 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 202 | 103.23 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 203 | 103.23 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 204 | 103.24 | atmosphere | 1000.0 | 10 | > th | dose independent | no | NA | NA |
| 206 | 103.24 | atmosphere | 1000.0 | 10 | < th | dose independent | no | NA | NA |
| 213 | 103.25 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 214 | 103.25 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 217 | 103.26 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 223 | 103.28 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 19 |
| 229 | 103.29 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 231 | 103.30 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 16 |
| 236 | 103.31 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 253 | 103.35 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 255 | 103.35 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 260 | 103.38 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 275 | 103.46 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 283 | 103.50 | wind | 5.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 308 | 103.57 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 330 | 103.62 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 338 | 103.65 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 17 | NA |
| 339 | 103.65 | atmosphere | 1000.0 | 10 | < th | dose independent | sin | 17 | NA |
| 394 | 103.77 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 16 | 23 |
| 412 | 103.82 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 19 | 23 |
| 419 | 103.84 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 455 | 103.90 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 476 | 103.95 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 481 | 103.95 | wind | 5.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 491 | 103.97 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 492 | 103.97 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 497 | 103.98 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 526 | 104.03 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 528 | 104.03 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 530 | 104.03 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 532 | 104.03 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 542 | 104.05 | wind | 7.0 | 90 | < th | dose independent | sin | 11 | NA |
| 548 | 104.05 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 10 | 18 |
| 555 | 104.05 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 584 | 104.10 | wind | 7.0 | 90 | > th | dose independent | sin | 11 | NA |
| 590 | 104.11 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 618 | 104.15 | wind | 7.0 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 649 | 104.18 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 15 |
| 657 | 104.18 | humidity | 70.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 665 | 104.19 | wind | 7.0 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 667 | 104.20 | wind | 7.0 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 672 | 104.21 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 15 |
| 680 | 104.23 | wind | 9.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 694 | 104.25 | wind | 7.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 699 | 104.25 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 712 | 104.26 | wind | 9.0 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 734 | 104.27 | wind | 7.0 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 769 | 104.30 | wind | 9.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 774 | 104.31 | radiation | 20.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 787 | 104.31 | wind | 9.0 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 800 | 104.32 | wind | 7.0 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 823 | 104.34 | wind | 7.0 | 90 | > th | dose independent | rect. | 17 | 12 |
| 857 | 104.36 | wind | 9.0 | 720 | < th | dose independent | sin | 9 | NA |
| 862 | 104.36 | wind | 9.0 | 720 | > th | dose independent | rect. | 15 | 22 |
| 870 | 104.37 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 0 | NA |
| 926 | 104.44 | wind | 9.0 | 720 | > th | dose independent | sin | 9 | NA |
| 957 | 104.45 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 17 | 22 |
| 980 | 104.49 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 18 |