BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0692400 Os03g0692400|AK101780
(521 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0692400 Protein of unknown function DUF966 family protein 1029 0.0
Os08g0561600 Protein of unknown function DUF966 family protein 347 1e-95
Os01g0839200 Protein of unknown function DUF966 family protein 142 6e-34
Os03g0192300 Protein of unknown function DUF966 family protein 122 6e-28
Os09g0571000 Protein of unknown function DUF966 family protein 107 2e-23
Os01g0975000 Protein of unknown function DUF966 family protein 87 4e-17
>Os03g0692400 Protein of unknown function DUF966 family protein
Length = 521
Score = 1029 bits (2660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/502 (100%), Positives = 502/502 (100%)
Query: 20 KVPVVYYLTRSRHLEHPHFVEVPVSSPEGLYLRDVISHLNMVRGKGMAAMYSWSCKRSYK 79
KVPVVYYLTRSRHLEHPHFVEVPVSSPEGLYLRDVISHLNMVRGKGMAAMYSWSCKRSYK
Sbjct: 20 KVPVVYYLTRSRHLEHPHFVEVPVSSPEGLYLRDVISHLNMVRGKGMAAMYSWSCKRSYK 79
Query: 80 NGFVWHDLGEDDLVHPATDGEYVLKGSELLDQSSSGQFYQGTNGNQKQQSRLKEGARLPL 139
NGFVWHDLGEDDLVHPATDGEYVLKGSELLDQSSSGQFYQGTNGNQKQQSRLKEGARLPL
Sbjct: 80 NGFVWHDLGEDDLVHPATDGEYVLKGSELLDQSSSGQFYQGTNGNQKQQSRLKEGARLPL 139
Query: 140 PREASYSSSPPSVIVREAKPRRSPSVPSLEEDDSPVQCRVTSLENMSPESEPQRTLLSRA 199
PREASYSSSPPSVIVREAKPRRSPSVPSLEEDDSPVQCRVTSLENMSPESEPQRTLLSRA
Sbjct: 140 PREASYSSSPPSVIVREAKPRRSPSVPSLEEDDSPVQCRVTSLENMSPESEPQRTLLSRA 199
Query: 200 GSASPAEFRVYKPTGCVDAATQTDDLGRRSVRKVPEMHKKSLSTDHDSVVREITEYRQSQ 259
GSASPAEFRVYKPTGCVDAATQTDDLGRRSVRKVPEMHKKSLSTDHDSVVREITEYRQSQ
Sbjct: 200 GSASPAEFRVYKPTGCVDAATQTDDLGRRSVRKVPEMHKKSLSTDHDSVVREITEYRQSQ 259
Query: 260 PRRSAELQGIAREAMSQCHTPLSIPSSRGKSESLESLIRADNNALNSFRILEEDDIIMPT 319
PRRSAELQGIAREAMSQCHTPLSIPSSRGKSESLESLIRADNNALNSFRILEEDDIIMPT
Sbjct: 260 PRRSAELQGIAREAMSQCHTPLSIPSSRGKSESLESLIRADNNALNSFRILEEDDIIMPT 319
Query: 320 CPKLRPANVLMQLITCGSLSVKDHENIRLVEGYKPRFPNMKFPSPLISRTMMMGELDYLS 379
CPKLRPANVLMQLITCGSLSVKDHENIRLVEGYKPRFPNMKFPSPLISRTMMMGELDYLS
Sbjct: 320 CPKLRPANVLMQLITCGSLSVKDHENIRLVEGYKPRFPNMKFPSPLISRTMMMGELDYLS 379
Query: 380 ENPRLMGMRLEDKEYFSGSLIETKMQRDVPADRYSALKRSSSYNAERSNETLDCARPDED 439
ENPRLMGMRLEDKEYFSGSLIETKMQRDVPADRYSALKRSSSYNAERSNETLDCARPDED
Sbjct: 380 ENPRLMGMRLEDKEYFSGSLIETKMQRDVPADRYSALKRSSSYNAERSNETLDCARPDED 439
Query: 440 TVNTSRARCLPRTPILSSFLHPKSEAMKSPISDCRRSSSAGPDCSLASSGDGSKRFIDAT 499
TVNTSRARCLPRTPILSSFLHPKSEAMKSPISDCRRSSSAGPDCSLASSGDGSKRFIDAT
Sbjct: 440 TVNTSRARCLPRTPILSSFLHPKSEAMKSPISDCRRSSSAGPDCSLASSGDGSKRFIDAT 499
Query: 500 GAPGSRIDSFRKEEKLVKIEES 521
GAPGSRIDSFRKEEKLVKIEES
Sbjct: 500 GAPGSRIDSFRKEEKLVKIEES 521
>Os08g0561600 Protein of unknown function DUF966 family protein
Length = 577
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 241/535 (45%), Positives = 309/535 (57%), Gaps = 50/535 (9%)
Query: 20 KVPVVYYLTRSRHLEHPHFVEVPVSSPEGLYLRDVISHLNMVRGKGMAAMYSWSCK-RSY 78
+V VVYYL R+RHLEHPHF+EVP++SP+GLYLRDVI+ LN++RGKGMAAMYSWSCK RSY
Sbjct: 47 RVAVVYYLCRNRHLEHPHFIEVPLASPDGLYLRDVINRLNVLRGKGMAAMYSWSCKSRSY 106
Query: 79 KNGFVWHDLGEDDLVHPATDGEYVLKGSELLDQSSSGQFYQGTNGNQKQQSRLKEGARLP 138
KNGFVWHDL EDDLV PA EY+LKGSELLD+S + G G K ++ P
Sbjct: 107 KNGFVWHDLSEDDLVLPAQGNEYILKGSELLDRSPPDRQQNGV-GEPKVETLKHPPEESP 165
Query: 139 LPR---EASYSSSPPSVIVREAKPRR----------------SPSVPSLEEDDSPVQCRV 179
R E SSS PS + +EA P S S + EDD QCR
Sbjct: 166 HSRGSQEGCSSSSSPSAVTKEASPPPPTPQPQQQAQSATLLPSSSASTNREDD---QCRT 222
Query: 180 ---TSLENMSPESEPQRTL-LSRAGSASPAEFRVYKPTGCVDAATQTDDLGRRSVRKVPE 235
S NMSPE + LS A S P E+RV KP G DA+TQTDD S R PE
Sbjct: 223 PRSGSSGNMSPEPAGRVAPPLSEASSPGPLEYRVCKPIGAQDASTQTDD----SERDAPE 278
Query: 236 MHKK--SLSTDHDSVVREITEY--RQSQPRRSAELQGIAREAMSQCHTPLSIPSSRGKSE 291
+ + + T++ + EI E R +QP S + G+ RE+ C S S G+ E
Sbjct: 279 RNSRMAGVCTENSTSDSEIQECHPRSTQP--SPKGPGVVRESPPVCS---SDASPGGRVE 333
Query: 292 SLESLIRADNNALNSFRILEEDDIIMPTCPKLRPANVLMQLITCGSLSVKDHENIRLVEG 351
+LESLIRA+ + +SFR LEE+ + P K +PAN+LMQLITCGS+SVKDH + L+
Sbjct: 334 TLESLIRAEASRRSSFRALEEEHLFAPMGVKFKPANLLMQLITCGSISVKDHRSFGLIPT 393
Query: 352 YKPRFPNMKFPSPLISRTMMMGELDYLSENPRLMGMRLEDKEYFSGSLIETKMQRDVPAD 411
Y+PRF ++FPSP+ S + + LD + N R +GMR+ + EYFSGSL+ETK Q +
Sbjct: 394 YRPRFTQVEFPSPMFSTPLALRHLDNIPCNARTIGMRIPESEYFSGSLVETKKQDESGKG 453
Query: 412 RYSALKRSSSYNAERSNETLDCARPDEDTVNTSRARCLPRTPILSSFLHPKSEAMKSPIS 471
LKRSSS + +R D R E + RCLP+T + S +S + SP S
Sbjct: 454 GTPTLKRSSSCSEDRVCRVSDSNRDMESMAESGSFRCLPQTIKMISCKQSRSGTILSPNS 513
Query: 472 DCRRSSSAGPDCS-----LASSGDGSKRFIDATGAP--GSRIDSFRKE-EKLVKI 518
D R S S +CS L SS S R D + SR++SF +E EK++KI
Sbjct: 514 DVRNSCSRQ-ECSTRSSPLGSSKSASNRMTDLSLGKLSSSRVESFHEEKEKVIKI 567
>Os01g0839200 Protein of unknown function DUF966 family protein
Length = 411
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 73/87 (83%)
Query: 23 VVYYLTRSRHLEHPHFVEVPVSSPEGLYLRDVISHLNMVRGKGMAAMYSWSCKRSYKNGF 82
VVYYL+R+ HLEHPHF+EV V+SP+GLYLRDVI L+ +RGKGMA MYSW+ KRSY+NGF
Sbjct: 48 VVYYLSRNGHLEHPHFMEVAVASPDGLYLRDVIDRLDALRGKGMARMYSWASKRSYRNGF 107
Query: 83 VWHDLGEDDLVHPATDGEYVLKGSELL 109
VWHDL +DD ++P EYVLKG+E L
Sbjct: 108 VWHDLADDDYIYPVAGREYVLKGTERL 134
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 46/182 (25%)
Query: 284 PSSRGKSESLESLIRADNNALNSFRILEEDDIIMPTCPKLRPANVLMQLITCGSLSVKDH 343
P++ E+LE+LI+AD + + + + R ++VLMQLI+CGS+SVK
Sbjct: 239 PTASTSPETLEALIKADGRVMAA----------VTGGGRTRASSVLMQLISCGSVSVKS- 287
Query: 344 ENIRLVEGYKPRFPNMKFPSPLISRTMMMGE---------LDYLSENPRLMGMRLEDKEY 394
SP+++RT +E P +EDKEY
Sbjct: 288 ----------------TLASPVMARTAAHYRPRPPRPPTLASTTTEIPNYRQKIVEDKEY 331
Query: 395 FSGSLIETKMQRDVPADR---YSALKRSSSYNAERSNETLDCARPDEDTVNTSRARCLPR 451
FSGSL+ETK R PAD + L+RSSSYNA+R + P + V+ RC+PR
Sbjct: 332 FSGSLVETK--RSSPADTSQDIAVLRRSSSYNADRVQKV----EPSTEAVDM-HDRCIPR 384
Query: 452 TP 453
P
Sbjct: 385 RP 386
>Os03g0192300 Protein of unknown function DUF966 family protein
Length = 345
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 74/98 (75%)
Query: 20 KVPVVYYLTRSRHLEHPHFVEVPVSSPEGLYLRDVISHLNMVRGKGMAAMYSWSCKRSYK 79
KV ++YYL R+ LEHPHF+E+ + L L+DV+ L ++RGKGM A++SWSCKR+YK
Sbjct: 39 KVQIIYYLCRNGQLEHPHFMELAQHPHQPLRLKDVMDRLTLLRGKGMPALFSWSCKRNYK 98
Query: 80 NGFVWHDLGEDDLVHPATDGEYVLKGSELLDQSSSGQF 117
NG+VW+DL E+D+++P+ EYVLKGSE+ SS +F
Sbjct: 99 NGYVWNDLSENDVIYPSDGVEYVLKGSEIFPGCSSDRF 136
>Os09g0571000 Protein of unknown function DUF966 family protein
Length = 480
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 64/96 (66%), Gaps = 8/96 (8%)
Query: 21 VPVVYYLTRSRH--LEHPHFVEVPVSSPE-----GLYLRDVISHLNMVRGKGMAAMYSWS 73
V VVYYL RSR LEHPH +EV V E L LRDV L+ +RGKGMAAMYSWS
Sbjct: 38 VAVVYYLCRSRQGGLEHPHLMEVEVGDGEEQVHVQLRLRDVTRRLDALRGKGMAAMYSWS 97
Query: 74 CKRSYKNGFVWHDLGE-DDLVHPATDGEYVLKGSEL 108
CKRSY+ G+VWHDL DDL+ P +YVLK S L
Sbjct: 98 CKRSYRGGYVWHDLSHPDDLLLPTGPHDYVLKASLL 133
>Os01g0975000 Protein of unknown function DUF966 family protein
Length = 342
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 65/106 (61%), Gaps = 12/106 (11%)
Query: 21 VPVVYYLTRSR-HLEHPHFVEVPVSSPEG-------LYLRDVISHLNMVRGKGMAAMYSW 72
V VVYYL R L+HPHFV V V S L+LRD I+ L+ +RG M A YSW
Sbjct: 39 VGVVYYLCRQDGQLDHPHFVHVHVPSDSDSDHPRPRLHLRDFIARLSDLRGAAMPAAYSW 98
Query: 73 SCKRSYKN--GFVWHDLGEDDLV-HPATDG-EYVLKGSELLDQSSS 114
S K +Y+ G+VW DL DDL+ P+T+ EYVLKGS LL +S+
Sbjct: 99 SAKTTYRRNAGYVWQDLTADDLIPAPSTNHEEYVLKGSPLLHHNSN 144
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,142,697
Number of extensions: 828039
Number of successful extensions: 2252
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 2240
Number of HSP's successfully gapped: 7
Length of query: 521
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 416
Effective length of database: 11,553,331
Effective search space: 4806185696
Effective search space used: 4806185696
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)