Os08g0561600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF966 family protein.
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Os08g0561600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF966 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.18 | 0.493 | 8.3 | -2.23 | 0.579 | 2.13 | 0.394 | -3.98 | -0.294 | 22.1 | 22.88 | 1271 | -- | -- |
| 119.72 | 0.51 | 8.2 | -1.18 | 0.688 | 1.76 | 0.182 | -- | -0.104 | 22.2 | 21.14 | 1362 | -- | -- |
| 110.74 | 0.49 | 8.3 | -2.2 | 0.592 | 2.11 | -- | -3.77 | -0.288 | 22 | 22.79 | 1283 | -- | -- |
| 118.98 | 0.508 | 8.18 | -1.15 | 0.627 | 1.85 | -- | -- | -0.029 | 22.1 | 21.29 | 1308 | -- | -- |
| 120.81 | 0.512 | 8.27 | -2.12 | -- | 2.41 | -- | -3.85 | -0.28 | -- | 22.54 | 1038 | -- | -- |
| 227.08 | 0.706 | 8.08 | -0.485 | 0.782 | -- | 0.446 | -- | 0.39 | 23.2 | -- | -- | -- | -- |
| 227.92 | 0.707 | 8.08 | -0.503 | 0.78 | -- | -- | -- | 0.388 | 23.1 | -- | -- | -- | -- |
| 128.75 | 0.528 | 8.16 | -1.13 | -- | 2.12 | -- | -- | -0.0391 | -- | 21.4 | 1009 | -- | -- |
| 149 | 0.569 | 8.13 | -- | 0.566 | 1.57 | -- | -- | 0.155 | 22 | 22.34 | 1196 | -- | -- |
| 265.92 | 0.762 | 8.06 | -0.484 | -- | -- | -- | -- | 0.395 | -- | -- | -- | -- | -- |
| 234.58 | 0.716 | 8.07 | -- | 0.776 | -- | -- | -- | 0.444 | 23.1 | -- | -- | -- | -- |
| 159.86 | 0.589 | 8.12 | -- | -- | 1.84 | -- | -- | 0.157 | -- | 22.1 | 997 | -- | -- |
| 272.1 | 0.77 | 8.05 | -- | -- | -- | -- | -- | 0.449 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 2 | 108.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 8 | 110.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 7 |
| 13 | 110.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 32 | 111.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 48 | 111.88 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 266 | 114.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 530 | 115.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 535 | 115.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 556 | 115.82 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 19 |
| 564 | 115.85 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 19 |
| 574 | 115.87 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 18 |
| 578 | 115.88 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 593 | 115.92 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 21 |
| 601 | 115.94 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 16 |
| 608 | 115.96 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 16 |
| 609 | 115.96 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 17 |
| 652 | 116.03 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 17 |
| 656 | 116.03 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 22 |
| 668 | 116.05 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 22 |
| 698 | 116.11 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 709 | 116.13 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 720 | 116.15 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 727 | 116.16 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 794 | 116.34 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 825 | 116.40 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 836 | 116.43 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 890 | 116.66 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 900 | 116.69 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 940 | 116.81 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |