BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0643100 Os03g0643100|AK106587
(413 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0643100 Homeodomain-like containing protein 793 0.0
Os10g0468200 768 0.0
Os07g0115800 767 0.0
Os09g0122200 766 0.0
Os07g0210800 294 1e-79
Os04g0463600 Conserved hypothetical protein 121 9e-28
AK073397 121 9e-28
Os02g0813200 Conserved hypothetical protein 115 9e-26
Os06g0595700 Transposase, IS4 domain containing protein 108 5e-24
Os12g0299600 Transposase, IS4 domain containing protein 106 4e-23
Os05g0217900 Conserved hypothetical protein 99 6e-21
>Os03g0643100 Homeodomain-like containing protein
Length = 413
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/413 (92%), Positives = 384/413 (92%)
Query: 1 DAGXXXXXXXXXXXXXIWRAGWAPLXXXXXXXXXXXXXXXXSIWKAMPSKGSSQMTMTNQ 60
DAG IWRAGWAPL SIWKAMPSKGSSQMTMTNQ
Sbjct: 1 DAGPTTSSTQQPSTASIWRAGWAPLGGGVRQVRHRGQQPGPSIWKAMPSKGSSQMTMTNQ 60
Query: 61 RNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMFLIELLTDHDVPGFR 120
RNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMFLIELLTDHDVPGFR
Sbjct: 61 RNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMFLIELLTDHDVPGFR 120
Query: 121 TQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKDLLDQSGFGWDSDRM 180
TQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKDLLDQSGFGWDSDRM
Sbjct: 121 TQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKDLLDQSGFGWDSDRM 180
Query: 181 MVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGRTRHGMDHYARKTKN 240
MVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGRTRHGMDHYARKTKN
Sbjct: 181 MVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGRTRHGMDHYARKTKN 240
Query: 241 APAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFSQHSPTPVHLTKVPP 300
APAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFSQHSPTPVHLTKVPP
Sbjct: 241 APAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFSQHSPTPVHLTKVPP 300
Query: 301 SSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAAIEEKKLEDPYSINK 360
SSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAAIEEKKLEDPYSINK
Sbjct: 301 SSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAAIEEKKLEDPYSINK 360
Query: 361 CITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIRKEIAALE 413
CITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIRKEIAALE
Sbjct: 361 CITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIRKEIAALE 413
>Os10g0468200
Length = 527
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/367 (99%), Positives = 366/367 (99%)
Query: 47 MPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMF 106
MPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGT KRARWSHQMKMF
Sbjct: 1 MPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTAKRARWSHQMKMF 60
Query: 107 LIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKD 166
LIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKD
Sbjct: 61 LIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKD 120
Query: 167 LLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGR 226
LLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGR
Sbjct: 121 LLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGR 180
Query: 227 TRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFS 286
TRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFS
Sbjct: 181 TRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFS 240
Query: 287 QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAA 346
QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKE+IDRFAA
Sbjct: 241 QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEDIDRFAA 300
Query: 347 IEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIR 406
IEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIR
Sbjct: 301 IEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIR 360
Query: 407 KEIAALE 413
KEIAALE
Sbjct: 361 KEIAALE 367
>Os07g0115800
Length = 367
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/367 (100%), Positives = 367/367 (100%)
Query: 47 MPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMF 106
MPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMF
Sbjct: 1 MPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMF 60
Query: 107 LIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKD 166
LIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKD
Sbjct: 61 LIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKD 120
Query: 167 LLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGR 226
LLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGR
Sbjct: 121 LLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGR 180
Query: 227 TRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFS 286
TRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFS
Sbjct: 181 TRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFS 240
Query: 287 QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAA 346
QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAA
Sbjct: 241 QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAA 300
Query: 347 IEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIR 406
IEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIR
Sbjct: 301 IEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIR 360
Query: 407 KEIAALE 413
KEIAALE
Sbjct: 361 KEIAALE 367
>Os09g0122200
Length = 467
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/367 (99%), Positives = 366/367 (99%)
Query: 47 MPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMF 106
MPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMF
Sbjct: 1 MPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSHQMKMF 60
Query: 107 LIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKD 166
LIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKD
Sbjct: 61 LIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDYRSVKD 120
Query: 167 LLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGR 226
LLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGR
Sbjct: 121 LLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDLAPLYDGRYAEGR 180
Query: 227 TRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFS 286
TRHGMDHYARKTKNAPAHSTQEAN VDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFS
Sbjct: 181 TRHGMDHYARKTKNAPAHSTQEANVVDTYQSPSPNSNAPGESGLQFPFGEEVETANLDFS 240
Query: 287 QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAA 346
QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAA
Sbjct: 241 QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDRFAA 300
Query: 347 IEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIR 406
IEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIR
Sbjct: 301 IEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIR 360
Query: 407 KEIAALE 413
KEIAALE
Sbjct: 361 KEIAALE 367
>Os07g0210800
Length = 384
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/155 (91%), Positives = 145/155 (93%), Gaps = 8/155 (5%)
Query: 42 SIWKAMPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSH 101
+I KAMPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSH
Sbjct: 96 AIRKAMPSKGSSQMTMTNQRNLSDRRAQQPLSQVYVDVDSEHGTAERQEIGTTKRARWSH 155
Query: 102 QMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDY 161
QMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDY
Sbjct: 156 QMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFGTSFTTNQVKQKEQDLKKDY 215
Query: 162 RSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRK 196
RSVKDLLDQSGFGWDSDRMM S +ADR+
Sbjct: 216 RSVKDLLDQSGFGWDSDRMMAS--------YADRE 242
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/130 (96%), Positives = 128/130 (98%)
Query: 284 DFSQHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDR 343
+ + HSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDR
Sbjct: 255 ELAMHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYLKLKKEEIDR 314
Query: 344 FAAIEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLA 403
FAAIEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLA
Sbjct: 315 FAAIEEKKLEDPYSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSDALRLA 374
Query: 404 WIRKEIAALE 413
WIRKEIAALE
Sbjct: 375 WIRKEIAALE 384
>Os04g0463600 Conserved hypothetical protein
Length = 336
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 152/343 (44%), Gaps = 38/343 (11%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKF-GTSFTTNQVKQKE 154
RARW + L+++L ++++ +RTQN W + W IV N ++ FT Q+++ E
Sbjct: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
Query: 155 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 214
LK+DYR VK +L + G WD + M+ +WD + K A ++ KSFP L
Sbjct: 64 TQLKRDYRLVKLILQREGVTWDQNASMIRTTDEIWDEIIEEMPK-ARKYQFKSFPLLQSL 122
Query: 215 APLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPF 274
L++G EG +H +K A + + +PS PG
Sbjct: 123 EVLFEGDIPEG------EHNLMPSKPQLAGRNVDEGGNNMSTAPS----IPGRPCSTVIA 172
Query: 275 GEEVETANLDFSQHSPT----------------------PVHLTKVPPSSAQTPSEVPES 312
G + N+ Q +P P H P SA P+
Sbjct: 173 GIDDGENNIGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSC 232
Query: 313 -RPGKKQKIKSVSPD-DGFHERYLKLK-KEEIDRFAAIEEKKLEDPYSINKCITVLEGLH 369
P K ++ K PD E +L+ + K+ + A +EKK +P+SI+ CI L +
Sbjct: 233 IEPQKDKRKKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMT 292
Query: 370 GLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIRKEIAAL 412
+ ++A+D+FK NRE+FLS+ LR WI++E+ L
Sbjct: 293 DVSDQVKILASDVFKDAANREIFLSYDL-RLRTLWIKREVNRL 334
>AK073397
Length = 336
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 152/343 (44%), Gaps = 38/343 (11%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKF-GTSFTTNQVKQKE 154
RARW + L+++L ++++ +RTQN W + W IV N ++ FT Q+++ E
Sbjct: 4 RARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHE 63
Query: 155 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 214
LK+DYR VK +L + G WD + M+ +WD + K A ++ KSFP L
Sbjct: 64 TQLKRDYRLVKLILQREGVTWDQNASMIRTTDEIWDEIIEEMPK-ARKYQFKSFPLLQSL 122
Query: 215 APLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPF 274
L++G EG +H +K A + + +PS PG
Sbjct: 123 EVLFEGDIPEG------EHNLMPSKPQLAGRNVDEGGNNMSTAPS----IPGRPCSTVIA 172
Query: 275 GEEVETANLDFSQHSPT----------------------PVHLTKVPPSSAQTPSEVPES 312
G + N+ Q +P P H P SA P+
Sbjct: 173 GIDDGENNIGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSC 232
Query: 313 -RPGKKQKIKSVSPD-DGFHERYLKLK-KEEIDRFAAIEEKKLEDPYSINKCITVLEGLH 369
P K ++ K PD E +L+ + K+ + A +EKK +P+SI+ CI L +
Sbjct: 233 IEPQKDKRKKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMT 292
Query: 370 GLQIGDILVAADIFKGKDNREVFLSFSSDALRLAWIRKEIAAL 412
+ ++A+D+FK NRE+FLS+ LR WI++E+ L
Sbjct: 293 DVSDQVKILASDVFKDAANREIFLSYDL-RLRTLWIKREVNRL 334
>Os02g0813200 Conserved hypothetical protein
Length = 704
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 62/354 (17%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTK-FGTSFTTNQVKQKE 154
RA W+ ++ L+ELL +H+ P +R QN W+ EAW IV + K T +Q+++KE
Sbjct: 363 RASWNPALEKILVELLHEHNTPEYRGQNGWTSEAWNKIVKEFHEKDRYVCLTKSQIQEKE 422
Query: 155 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 214
++LK++YR +K+ QSG W++ R ++ A ++W+ K A +R KSFP F+ L
Sbjct: 423 KELKREYRMLKEARKQSGASWNNQRCIIEAEPAIWNNIIISFPK-AKKFRTKSFPLFEAL 481
Query: 215 APLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPF 274
LYDG AEG T N + + + +S + + G + + FP
Sbjct: 482 GELYDGHTAEG------------TYNFTSTEPLQHPIITQVES---DQDDLGNTEIIFPD 526
Query: 275 GEEVETANL----DFSQHSPTPVHLTKVPPSS--AQTPSEVPESRPGKKQKIKSVSPDDG 328
E+ T + D ++ K P P E P +++K V +G
Sbjct: 527 YEDTLTYQVQDDADATEDDNANAERLKEMPHRRVVAVPRNKEEKEPKRQKKSVGV---EG 583
Query: 329 FHERYLKLKKEEIDRFAA---------------------------------IEEKKLEDP 355
ERYL ++ ++ + AA + +K +
Sbjct: 584 LMERYLDMRTKQTEDEAAQLAREKEAHLAREKEAQLAREKEAHLAREKEAYLAREKESND 643
Query: 356 YSINKCITVLEGLHGLQIGDILVAADIFKGKDNREVFLSFSSD--ALRLAWIRK 407
+SI +CI+VL + ++ + + A +FK +NRE+F+S + L+W+RK
Sbjct: 644 FSIKRCISVLNSM-DVRKAEKVKAYTVFKNAENREIFVSACDEDPESALSWLRK 696
>Os06g0595700 Transposase, IS4 domain containing protein
Length = 817
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 161/343 (46%), Gaps = 42/343 (12%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTK-FGTSFTTNQVKQKE 154
R W+ ++ L+ELL +H+ P +R QN W+ EA IV + K T +Q+++KE
Sbjct: 489 RTSWNPALEKILVELLHEHNTPEYRGQNGWTSEARNKIVKEFHEKDRYVCLTKSQIQEKE 548
Query: 155 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 214
++LK++YR +K+ QSG W++ R ++ A ++W+ K A +R KSFP F+ L
Sbjct: 549 KELKREYRMLKEARKQSGASWNNQRCIIEAEPAIWNNIIISFPK-AKKFRTKSFPLFEAL 607
Query: 215 APLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPSPNSNAPGESGLQFPF 274
LYDG AEG + + + P + E++ D + + E L +
Sbjct: 608 GELYDGYTAEG----TYNFTSTEPLQHPIITQVESDQDDLGNTEIIFLDY--EDTLAYQV 661
Query: 275 GEEVETANLDFSQHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFHERYL 334
++V+ D + L ++P E + K+QK KSV + G ERYL
Sbjct: 662 QDDVDATEDDNANAE----RLKEMPHRRVVAVPRNKEEKEPKRQK-KSVGVE-GLMERYL 715
Query: 335 KLKKEEIDRFAA-------------------------IEEKKLEDPYSINKCITVLEGLH 369
++ ++ + AA + +K + +SI +CI+VL +
Sbjct: 716 DMRTKQTEDEAAQLAREKEAHLAREKEAQLAREKEAHLAREKESNDFSIKRCISVLNSM- 774
Query: 370 GLQIGDILVAADIFKGKDNREVFLSFSSD--ALRLAWIRKEIA 410
+ + + A +FK +NRE+F+S + L+W+R E+A
Sbjct: 775 DVTKAEKVKAYTVFKNSENREIFVSACDEDPESALSWLRSEMA 817
>Os12g0299600 Transposase, IS4 domain containing protein
Length = 754
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 154/331 (46%), Gaps = 38/331 (11%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFG-TSFTTNQVKQKE 154
RA W+ ++ L++LL +H+ P +R QN W+ EAW +V + + Q++ KE
Sbjct: 438 RASWNPGLEKALVDLLHEHNNPHYRCQNGWTSEAWNKVVKEFRDRHPYVAMNKQQIQDKE 497
Query: 155 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 214
++LK+DYR +K+ QSG WD+ R M+ A +VW K ++KSFP F+ L
Sbjct: 498 KELKRDYRLLKEARKQSGASWDNQRCMIVADDAVWANIITSNEKVRKFSKNKSFPLFESL 557
Query: 215 APLYDGRYAEGRTRHGMDHYARKTKNAPAHSTQEANAVDTYQSPS---PNSNAPGESGLQ 271
LYDG+ T G ++ A TQ V+ Y S P+ N +
Sbjct: 558 GELYDGQ-----TAEGNMNFTSIEPFQHATLTQ----VNEYLERSDSFPDVNWVADDD-- 606
Query: 272 FPFGEEVETANLDFS-QHSPTPVHLTKVPPSSAQTPSEVPESRPGKKQKIKSVSPDDGFH 330
E E + D + +H H+T S A V +++ ++++++ + +
Sbjct: 607 ----ETTEVQDEDNAVEHENQGSHITIT--SRANGEKNVKKTKSTERERVEKTPKRNKRN 660
Query: 331 E------RYLKLKKEEIDRFAAIEEKKLE---------DPYSINKCITVLEGLHGLQIGD 375
+ YL+++K + + A + ++ D SI CITV+E + L +
Sbjct: 661 DVVDMMGSYLEMRKRQSEEEEAKKREEEAKKREEASKVDDCSIRNCITVVESMEELSNEE 720
Query: 376 ILVAADIFKGKDNREVFLSFSSDALRLAWIR 406
+ + +FK NRE+F+S + RL W+R
Sbjct: 721 KVKSFGVFKDAQNREIFMS-AGPMTRLIWLR 750
>Os05g0217900 Conserved hypothetical protein
Length = 558
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 96 RARWSHQMKMFLIELLTDHDVPGFRTQNAWSKEAWTNIVCRLNTKFG-TSFTTNQVKQKE 154
RA W+ + L++LL +H+ P +R QN W+ EAW +V + + Q++ KE
Sbjct: 282 RASWNPGPEKALVDLLHEHNNPHYRCQNGWTSEAWNKVVKEFRDRHPYVTMNKQQIQDKE 341
Query: 155 QDLKKDYRSVKDLLDQSGFGWDSDRMMVSAPQSVWDTFADRKNKDAIHWRDKSFPYFDDL 214
++LK+DYR +K+ QSG WD+ R M+ A +VW K ++KSFP F+ L
Sbjct: 342 KELKRDYRLLKEARKQSGASWDNQRCMIVADDAVWANIITSNEKVRKFSKNKSFPLFESL 401
Query: 215 APLYDGRYAEG 225
LYDG+ AEG
Sbjct: 402 GELYDGQTAEG 412
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,102,126
Number of extensions: 630063
Number of successful extensions: 2167
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2160
Number of HSP's successfully gapped: 13
Length of query: 413
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 310
Effective length of database: 11,657,759
Effective search space: 3613905290
Effective search space used: 3613905290
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 157 (65.1 bits)