BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0638200 Os03g0638200|AK119211
(480 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0638200 Similar to Transporter-like protein 909 0.0
Os07g0571700 Similar to Transporter-like protein 486 e-137
Os09g0559800 Similar to Transporter-like protein 460 e-129
Os04g0609200 Major facilitator superfamily protein 111 1e-24
AK107361 103 4e-22
Os07g0582400 Similar to Sorbitol transporter 67 4e-11
Os12g0514000 Similar to Sorbitol transporter 66 4e-11
Os11g0637100 66 5e-11
>Os03g0638200 Similar to Transporter-like protein
Length = 480
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/480 (94%), Positives = 452/480 (94%)
Query: 1 METYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESL 60
METYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESL
Sbjct: 1 METYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESL 60
Query: 61 LSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVG 120
LSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVG
Sbjct: 61 LSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVG 120
Query: 121 IGVGGAHVFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVISVLSWRWXXXXX 180
IGVGGAHVFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVISVLSWRW
Sbjct: 121 IGVGGAHVFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVISVLSWRWLLALT 180
Query: 181 XXXXXXXIPFFGTTPESPRYLCGQNRTSDAMLVLERIAITNQAALPPGVLIYHQEAKVDH 240
IPFFGTTPESPRYLCGQNRTSDAMLVLERIAITNQAALPPGVLIYHQEAKVDH
Sbjct: 181 ALPCSLLIPFFGTTPESPRYLCGQNRTSDAMLVLERIAITNQAALPPGVLIYHQEAKVDH 240
Query: 241 SDLTSEKEDLLPVSEKECTFDNAMSFKYGGGIAAXXXXXXXXXXXXXXXXWFAFFANSFA 300
SDLTSEKEDLLPVSEKECTFDNAMSFKYGGGIAA WFAFFANSFA
Sbjct: 241 SDLTSEKEDLLPVSEKECTFDNAMSFKYGGGIAALLRLLSRKLLRSTLLLWFAFFANSFA 300
Query: 301 YYGLVLLTAQLSDANRSCTSGQTNVVPQKDVNLYKDTFITSLAEVPGLILSAVLVDWFGR 360
YYGLVLLTAQLSDANRSCTSGQTNVVPQKDVNLYKDTFITSLAEVPGLILSAVLVDWFGR
Sbjct: 301 YYGLVLLTAQLSDANRSCTSGQTNVVPQKDVNLYKDTFITSLAEVPGLILSAVLVDWFGR 360
Query: 361 KASMWFMLFTCCAFIGPLVLQQNELLTTVLLFGARAVAMGSFTVLCLYAPEVYPTSARST 420
KASMWFMLFTCCAFIGPLVLQQNELLTTVLLFGARAVAMGSFTVLCLYAPEVYPTSARST
Sbjct: 361 KASMWFMLFTCCAFIGPLVLQQNELLTTVLLFGARAVAMGSFTVLCLYAPEVYPTSARST 420
Query: 421 GVGIATAIGRIGGVVCPLVAVGMLRSCHQMEAILVFELVLFLAGVACFLFPIETKGRGMD 480
GVGIATAIGRIGGVVCPLVAVGMLRSCHQMEAILVFELVLFLAGVACFLFPIETKGRGMD
Sbjct: 421 GVGIATAIGRIGGVVCPLVAVGMLRSCHQMEAILVFELVLFLAGVACFLFPIETKGRGMD 480
>Os07g0571700 Similar to Transporter-like protein
Length = 491
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/475 (51%), Positives = 310/475 (65%), Gaps = 2/475 (0%)
Query: 3 TYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLS 62
TYTTD+AL GFG+FQ LVLAYA +GWV E+ME+MLLSFVGP V+ EW +S E L+S
Sbjct: 16 TYTTDDALTRAGFGRFQALVLAYACVGWVAEAMEVMLLSFVGPSVKAEWGVSGAAEGLVS 75
Query: 63 SVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVGIG 122
SVVFAGMLIGA G +SD+YGRRI L + + G LSAFSPNY+ LL LRF+VG+G
Sbjct: 76 SVVFAGMLIGACLGGLISDRYGRRIGFLSTAVVTGIFGLLSAFSPNYASLLVLRFVVGLG 135
Query: 123 VGGAHVFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVISVLSWRWXXXXXXX 182
+G HV ++WF+EFVPA RGTWMV+F C WT+GTILEA LAW V+ VL WRW
Sbjct: 136 LGAGHVLSTWFIEFVPAAKRGTWMVVFHCSWTVGTILEALLAWAVMPVLGWRWLLALSSA 195
Query: 183 XXXXXIPFFGTTPESPRYLCGQNRTSDAMLVLERIAITNQAALPPGVLIYHQEAKVDHSD 242
FF TPESPRYLC RT DA ++LE+IA N ++LPPG+L Y ++D
Sbjct: 196 PCFILFIFFPVTPESPRYLCSVGRTMDARVILEKIARMNNSSLPPGILTYASTRRIDK-- 253
Query: 243 LTSEKEDLLPVSEKECTFDNAMSFKYGGGIAAXXXXXXXXXXXXXXXXWFAFFANSFAYY 302
+ + E L ++E + + + GGI A WF + AN FAYY
Sbjct: 254 VLDDSETALLITEDGGSGIDEHTSSKPGGITALRESWSYDLIRSTFLLWFVYLANYFAYY 313
Query: 303 GLVLLTAQLSDANRSCTSGQTNVVPQKDVNLYKDTFITSLAEVPGLILSAVLVDWFGRKA 362
G++LLT++LS+ R C S N + KD NLY+D +TSLAE PGL+L+A+LVD GRK
Sbjct: 314 GVILLTSELSNGQRRCASVGINFMQPKDANLYRDVLVTSLAEFPGLVLAALLVDRIGRKV 373
Query: 363 SMWFMLFTCCAFIGPLVLQQNELLTTVLLFGARAVAMGSFTVLCLYAPEVYPTSARSTGV 422
S+ ML CAF+ PL + + T LLF AR MG F VL +Y PE+YP S+R+TGV
Sbjct: 374 SLGIMLLLSCAFLAPLAVHLGQGSVTTLLFCARTCIMGGFAVLYVYTPEIYPASSRNTGV 433
Query: 423 GIATAIGRIGGVVCPLVAVGMLRSCHQMEAILVFELVLFLAGVACFLFPIETKGR 477
GI ++ GRIG +V P+V V + +C Q EA+ +L+LFLA VAC L P+ETKGR
Sbjct: 434 GITSSFGRIGSIVSPVVTVSLSENCRQKEAVFFMDLMLFLAAVACALIPLETKGR 488
>Os09g0559800 Similar to Transporter-like protein
Length = 490
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/485 (51%), Positives = 313/485 (64%), Gaps = 9/485 (1%)
Query: 1 METYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESL 60
+ TYT DEAL MGFGKFQ VLAY+GM + E+ME+MLLSFVG V+ EW +SA+ ESL
Sbjct: 5 VSTYTVDEALISMGFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESL 64
Query: 61 LSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVG 120
++SVVF GML+GA WG VSD YGRR+ F+ L G G LSAF+PNY L+ LRF+VG
Sbjct: 65 ITSVVFVGMLVGAYSWGIVSDNYGRRVGFNFTALVTGGAGLLSAFAPNYLSLIVLRFMVG 124
Query: 121 IGVGGAHVFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVISVLSWRWXXXXX 180
+G+GG V +SWFLEF+PA NRGTWMVIFS FWTIGTI+EASLAW V+ L WRW
Sbjct: 125 VGLGGGPVLSSWFLEFIPAPNRGTWMVIFSAFWTIGTIMEASLAWAVMPSLGWRWLLAFS 184
Query: 181 XXXXXXXIPFFGTTPESPRYLCGQNRTSDAMLVLERIAITNQAALPPGVLIYHQEAKVDH 240
+ F+ T ESPRYLC + RT+DA+ VLE +A N+ ALP G L+ ++
Sbjct: 185 SLPSFALLLFYPLTLESPRYLCMKGRTADAVQVLETMARLNRVALPSGHLMSGHRMELHE 244
Query: 241 SDLTSEKEDLLPVSEKECTFDNAMSFKYGGGIAAXXXXXXXXXXXXXXXXWFAFFANSFA 300
+SE LL S K+ S GG A W F ++F
Sbjct: 245 LTDSSETSQLL--SAKKTNPAAHSSKTEIGGRNAILKLLSPNLIRSSLLLWTVFLGHAFL 302
Query: 301 YYGLVLLTAQLSDANRSCTSG-----QTNVVPQKDVNLYKDTFITSLAEVPGLILSAVLV 355
YYGLVLLT++LS N+ C S QTN D NLY++ FITS EVPGLILSA +V
Sbjct: 303 YYGLVLLTSELSHGNKICGSEGIVTMQTN--HSNDANLYRNVFITSFGEVPGLILSAAIV 360
Query: 356 DWFGRKASMWFMLFTCCAFIGPLVLQQNELLTTVLLFGARAVAMGSFTVLCLYAPEVYPT 415
D GRK SM ML+ C I PL++ Q E LTT+ LFGAR SF VL +YAPE+YPT
Sbjct: 361 DKIGRKLSMSSMLYISCLCIAPLMVPQTESLTTIFLFGARICISASFIVLHIYAPEIYPT 420
Query: 416 SARSTGVGIATAIGRIGGVVCPLVAVGMLRSCHQMEAILVFELVLFLAGVACFLFPIETK 475
+ R+TGVG A++I R GG++CPLVAVG++ +CHQ AIL+F V+ ++GVA FP+ET
Sbjct: 421 AVRATGVGFASSIARFGGILCPLVAVGLVHACHQTAAILIFITVMLVSGVAVSYFPLETS 480
Query: 476 GRGMD 480
GR +
Sbjct: 481 GRKLS 485
>Os04g0609200 Major facilitator superfamily protein
Length = 102
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 68/84 (80%)
Query: 3 TYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLS 62
TY+ D+AL GFG++Q+L+L+YAG+G + E+ME+MLLSFVGP V+ EW +++ ES+++
Sbjct: 8 TYSVDDALLSSGFGRYQILILSYAGVGLIAEAMEMMLLSFVGPSVQLEWKLTSHQESMIT 67
Query: 63 SVVFAGMLIGASGWGFVSDKYGRR 86
S+VF GMLIGA WG VSD YGRR
Sbjct: 68 SIVFVGMLIGAYTWGVVSDNYGRR 91
>AK107361
Length = 567
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 218/519 (42%), Gaps = 77/519 (14%)
Query: 11 EFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVFAGML 70
+ +G GK Q + +G GW+ +++ + ++ + P V E+NIS++ + S+ + G++
Sbjct: 71 DHIGMGKVQWQLFLLSGWGWMADNLWLQGVAIILPQVEREFNISSDVRWMTFSL-YCGLI 129
Query: 71 IGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNY-SCLLALRFLVGIGVGGAHVF 129
+GA+ WG ++D GRR + A G +P++ L L G V
Sbjct: 130 LGAATWGILADVIGRRPSFNITLCIAGIFGIAGGAAPSFVGLGGLLAALGFGLGGNLPVD 189
Query: 130 TSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVISVLS----------------- 172
FLEFVPA+++ + + S FW++G +L + +AW I+ S
Sbjct: 190 GMMFLEFVPAKSQ-YLLTLLSVFWSLGQLLASLVAWAFIANYSCDDNQSNTVTGPNTVAC 248
Query: 173 -------WRWXXXXXXXXXXXXIP---FFGTTPESPRYLCGQNRTSDAMLVLERIAITNQ 222
WR+ F PESP+Y + R +DA+ VL+ IA N
Sbjct: 249 DVSQNKGWRYSFYTFGALTFAMFVARYFVFNLPESPKYYLSRGRDADAVAVLKDIAARNG 308
Query: 223 AALPPGVLIYH-------QEAKVDHSDLTSEKEDLLPVSEKECTF-DNAMSFKYGGGIAA 274
L V+ QEA +D ++ + + + ++ F N + ++
Sbjct: 309 KPLGDDVISVEIFRSAAGQEASMDAQEIGHKPKGMKRITSAPKEFIHNFKGVSFTPDLSH 368
Query: 275 XXXXXXX-XXXXXXXXXWFAFFANSFAY--YGLVLLTAQLSDANRSCTSGQTNVVPQKDV 331
W + AY Y L LS+A G ++V
Sbjct: 369 VRPLFVGWRMAVTTTLLWVLWSLIGLAYPLYN-AFLPIYLSEAQ--GLDGASDV-----Y 420
Query: 332 NLYKDTFITSLAEVPGLILS--AVLVDWFGRKASM---------WFMLFTCCAFIGPLVL 380
Y++ I S+ VPG I++ AV + GR+ ++ + LFT + G VL
Sbjct: 421 TTYRNYAIISVCGVPGSIIAAWAVELPRSGRRGALGVGTLLTGVFLFLFTTASTEG-AVL 479
Query: 381 QQNEL--LTTVLLFGARAVAMGSFTVLCLYAPEVYPTSARSTGVGIATAIGRIGGVVCPL 438
N + LT +++G T+ CL PE++P R TG GIA A+ RI G + P+
Sbjct: 480 GYNAVTALTQNIMYG---------TLYCL-TPELFPAPHRGTGDGIAAALNRIFGAMAPI 529
Query: 439 VAVGMLRSCHQMEAILVFELVLFLAGVACFLFPIETKGR 477
+ + + V + L+GV FL P++++G+
Sbjct: 530 IGI----YAGGTAPLYVAASLFLLSGVLSFLIPLDSRGK 564
>Os07g0582400 Similar to Sorbitol transporter
Length = 577
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 4/203 (1%)
Query: 26 AGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVFAGMLIGASGWGFVSDKYGR 85
A M ++ +I ++S +++++NIS +L ++ LIG+ G SD GR
Sbjct: 95 ASMTSILLGYDIGVMSGASLYIKKDFNISDGKVEVLMGILNLYSLIGSFAAGRTSDWIGR 154
Query: 86 RICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVGIGVGGAHVFTSWFL-EFVPAQNRGT 144
R ++F+ + FL F+ NY+ L+ RF+ GIGVG A + + E PA RG
Sbjct: 155 RYTIVFAAVIFFAGAFLMGFAVNYAMLMFGRFVAGIGVGYALMIAPVYTAEVSPASARGF 214
Query: 145 WMVIFSCFWTIGTILE--ASLAWVVISV-LSWRWXXXXXXXXXXXXIPFFGTTPESPRYL 201
F G +L ++ A+ + + L WR PESPR+L
Sbjct: 215 LTSFPEVFINFGILLGYVSNYAFSRLPLNLGWRIMLGIGAAPSVLLALMVLGMPESPRWL 274
Query: 202 CGQNRTSDAMLVLERIAITNQAA 224
+ R +DA +VLE+ + T + A
Sbjct: 275 VMKGRLADAKVVLEKTSDTAEEA 297
>Os12g0514000 Similar to Sorbitol transporter
Length = 487
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 49 EEWNISAENESLLSSVVFAGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPN 108
E+ +S +LS + L+GA G+ SD+ GRR+ ++ + F + + +
Sbjct: 61 EDLGVSDAQIEVLSGAINIYSLVGALLAGWTSDRLGRRLTIVLTNGFFLAGPLVMSLAGG 120
Query: 109 YSCLLALRFLVGIGVGGAHVFTSWF-LEFVPAQNRGTWMVIFSCFWTIGTILE--ASLAW 165
Y+ L+A RF+ GIGVG A V + E PA +RG + F G +L ++ A+
Sbjct: 121 YAALMAGRFVAGIGVGYALVIAPVYAAEISPASSRGLLSSLPEIFINGGVMLSYVSNFAF 180
Query: 166 VVISV-LSWRWXXXXXXXXXXXXIPFFGTTPESPRYLCGQNRTSDAMLVLERIAITNQAA 224
+ V LSWR T PESPR+L + R +A +VL+R + T A
Sbjct: 181 SGLPVHLSWRLMFAAGVVPTVFLAAGVLTMPESPRWLAMKGRRGEARVVLDRTSDTPAEA 240
>Os11g0637100
Length = 478
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 26 AGMGWVVESMEIMLLSFVGPLVREEWNIS-AENESLLSSV-VFAGMLIGASGWGFVSDKY 83
A M ++ + L+S VRE+ +S AE E L S+ VF I A+GW +D
Sbjct: 37 ASMTTILMGYNLALMSGAQLFVREDMGLSDAEIEVLAGSMNVFMLASILAAGWA--ADTL 94
Query: 84 GRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVGIGVGGAHVFTSWF-LEFVPAQNR 142
GRR ++ + F + Y+ L+A RF+ +GVG A V + E PA R
Sbjct: 95 GRRGTIVLANAFLMAGALAMSLGATYAALMAARFVTSVGVGFARVVAPVYNAEISPASTR 154
Query: 143 GTWMVIFSCFWTIGTILE--ASLAWVVISV-LSWRWXXXXXXXXXXXXIPFFGTTPESPR 199
G + F +G +L ++ A+ + V L WR PESPR
Sbjct: 155 GVLTSLLDMFINVGILLSYVSNYAFAGLPVHLGWRVMFAIGAVPPVFLAAAVLAMPESPR 214
Query: 200 YLCGQNRTSDAMLVLERIAITNQAA 224
+L + R +DA +VL R + + + A
Sbjct: 215 WLAMRGRHADARVVLARTSDSAEEA 239
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.139 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,532,722
Number of extensions: 553960
Number of successful extensions: 1673
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1688
Number of HSP's successfully gapped: 9
Length of query: 480
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 375
Effective length of database: 11,553,331
Effective search space: 4332499125
Effective search space used: 4332499125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 158 (65.5 bits)