Os12g0514000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sorbitol transporter.
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Os12g0514000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sorbitol transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.98 | 0.407 | 11.5 | -0.95 | 2.21 | -0.766 | -0.921 | 1.14 | -0.273 | 13.9 | 0.2895 | 103 | -- | -- |
| 76.77 | 0.408 | 11.5 | -0.849 | 2.19 | -0.75 | -1.95 | -- | -0.216 | 13.8 | 2.58e-05 | 121 | -- | -- |
| 75.51 | 0.405 | 11.5 | -0.987 | 2.22 | -0.761 | -- | 1.83 | -0.287 | 13.9 | 0.3808 | 110 | -- | -- |
| 95.09 | 0.454 | 11.5 | -0.963 | 2.18 | -0.781 | -- | -- | -0.279 | 13.9 | 0.29 | 110 | -- | -- |
| 106.98 | 0.482 | 11.5 | -1.2 | -- | -2.51 | -- | 1.8 | -0.334 | -- | 0.8194 | 233 | -- | -- |
| 84.85 | 0.432 | 11.5 | -0.823 | 3.06 | -- | -2.09 | -- | -0.197 | 13.5 | -- | -- | -- | -- |
| 102.35 | 0.474 | 11.5 | -0.892 | 3.06 | -- | -- | -- | -0.209 | 13.5 | -- | -- | -- | -- |
| 127.71 | 0.526 | 11.5 | -1.12 | -- | -2.46 | -- | -- | -0.338 | -- | 0.7348 | 231 | -- | -- |
| 118.78 | 0.51 | 11.5 | -- | 2.64 | -0.443 | -- | -- | -0.121 | 13.9 | 0.29 | 110 | -- | -- |
| 675.99 | 1.21 | 11.5 | -1.01 | -- | -- | -- | -- | -0.276 | -- | -- | -- | -- | -- |
| 123.34 | 0.52 | 11.4 | -- | 3.08 | -- | -- | -- | -0.11 | 13.6 | -- | -- | -- | -- |
| 158.62 | 0.587 | 11.5 | -- | -- | -2.43 | -- | -- | -0.213 | -- | 0.95 | 203 | -- | -- |
| 703.16 | 1.24 | 11.5 | -- | -- | -- | -- | -- | -0.163 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.48 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 2 | 60.14 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 4 | 60.23 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 5 | 60.26 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 19 | 61.29 | radiation | 1.0 | 90 | < th | dose dependent | sin | 15 | NA |
| 23 | 61.85 | radiation | 1.0 | 90 | < th | dose independent | sin | 15 | NA |
| 38 | 62.09 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 40 | 62.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 47 | 62.75 | radiation | 1.0 | 90 | > th | dose independent | sin | 15 | NA |
| 52 | 62.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 57 | 63.29 | radiation | 1.0 | 270 | < th | dose dependent | sin | 19 | NA |
| 59 | 63.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 7 |
| 60 | 63.36 | radiation | 1.0 | 270 | > th | dose independent | sin | 19 | NA |
| 66 | 63.46 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 67 | 63.49 | radiation | 1.0 | 270 | < th | dose independent | sin | 19 | NA |
| 70 | 63.60 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 92 | 64.17 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 15 |
| 95 | 64.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 7 |
| 97 | 64.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 7 |
| 98 | 64.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 108 | 64.46 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 117 | 64.66 | humidity | 80.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 119 | 64.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 17 |
| 122 | 64.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 17 |
| 128 | 64.77 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 135 | 64.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 138 | 64.90 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 149 | 64.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 152 | 65.04 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 153 | 65.04 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 7 |
| 169 | 65.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 18 |
| 170 | 65.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 187 | 65.30 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 188 | 65.31 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 198 | 65.43 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 199 | 65.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 200 | 65.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 20 |
| 201 | 65.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 202 | 65.47 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 13 | 7 |
| 207 | 65.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 17 |
| 208 | 65.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 17 |
| 212 | 65.54 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 255 | 65.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 256 | 65.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 262 | 65.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 266 | 65.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 6 |
| 267 | 65.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 268 | 65.81 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 272 | 65.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 273 | 65.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 274 | 65.82 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 275 | 65.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 281 | 65.86 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 284 | 65.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 287 | 65.90 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 290 | 65.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 21 |
| 301 | 66.00 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 308 | 66.04 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 310 | 66.05 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 348 | 66.18 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 352 | 66.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 353 | 66.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 354 | 66.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 356 | 66.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 357 | 66.21 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 360 | 66.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 362 | 66.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 10 |
| 363 | 66.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 380 | 66.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 391 | 66.29 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 403 | 66.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 408 | 66.39 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 411 | 66.42 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 413 | 66.42 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 418 | 66.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 430 | 66.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 3 |
| 431 | 66.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 3 |
| 440 | 66.51 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 12 |
| 441 | 66.51 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 452 | 66.56 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 453 | 66.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 470 | 66.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 480 | 66.69 | humidity | 70.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 492 | 66.72 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 17 |
| 514 | 66.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 516 | 66.77 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 9 |
| 526 | 66.82 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 531 | 66.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 533 | 66.85 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 535 | 66.86 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 538 | 66.87 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 10 |
| 576 | 66.99 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 598 | 67.05 | wind | 1.0 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 602 | 67.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 641 | 67.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 23 |
| 647 | 67.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 650 | 67.23 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 17 |
| 680 | 67.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 750 | 67.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 14 |
| 753 | 67.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 756 | 67.48 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 765 | 67.50 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 18 |
| 833 | 67.70 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 838 | 67.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 839 | 67.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 852 | 67.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 15 |
| 854 | 67.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 881 | 67.83 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 915 | 67.95 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 923 | 67.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 930 | 67.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 940 | 68.00 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 955 | 68.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 21 |
| 956 | 68.03 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 958 | 68.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 21 |
| 959 | 68.04 | radiation | 1.0 | 270 | > th | dose independent | sin | 6 | NA |
| 972 | 68.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 979 | 68.08 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 981 | 68.09 | humidity | 90.0 | 90 | < th | dose independent | rect. | 7 | 6 |
| 998 | 68.12 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 9 |