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Os07g0571700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Transporter-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.28 (0.0178) R2 : 0.726
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.55 (0.0448) R2dC : 0.719 R2C : 0.721
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.1 (0.0375) R2dN8 : 0.00556 R2N8 : 0.00702
σ : 0.336
deviance : 51.62
__
_____
C
peak time of C : 15.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.84 0.277 9.28 0.569 1.27 -0.545 0.402 -0.0573 -0.0446 16.9 0.7438 37 -- --
34.86 0.275 9.28 0.571 1.27 -0.542 0.394 -- -0.0455 16.9 0.7798 40 -- --
35.19 0.276 9.28 0.574 1.26 -0.547 -- -0.0834 -0.0396 16.9 0.7814 43 -- --
35.28 0.277 9.28 0.571 1.26 -0.549 -- -- -0.0485 16.9 0.7799 43 -- --
46.03 0.316 9.28 0.507 -- -1.48 -- -0.533 -0.109 -- 1.519 470 -- --
41.05 0.3 9.27 0.606 1.56 -- 0.449 -- -0.0347 15.4 -- -- -- --
41.69 0.302 9.27 0.614 1.56 -- -- -- -0.032 15.4 -- -- -- --
46.86 0.319 9.27 0.508 -- -1.46 -- -- -0.0948 -- 1.445 465 -- --
43.76 0.308 9.3 -- 1.23 -0.613 -- -- -0.113 17.2 0.5554 44 -- --
179.33 0.626 9.27 0.548 -- -- -- -- -0.0733 -- -- -- -- --
51.62 0.336 9.28 -- 1.55 -- -- -- -0.1 15.4 -- -- -- --
53.19 0.34 9.28 -- -- -1.46 -- -- -0.142 -- 0.17 465 -- --
187.25 0.639 9.28 -- -- -- -- -- -0.134 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.48 temperature 15.0 720 > th dose dependent rect. 6 1
5 32.12 temperature 10.0 90 > th dose dependent rect. 5 13
6 32.27 temperature 20.0 720 > th dose independent rect. 6 1
19 33.14 atmosphere 995.0 90 > th dose dependent rect. 9 14
21 33.33 radiation 30.0 270 < th dose independent rect. 21 11
25 33.46 radiation 1.0 90 > th dose independent rect. 13 20
31 33.56 radiation 10.0 30 < th dose dependent rect. 18 12
33 33.60 radiation 1.0 30 < th dose independent rect. 18 12
37 33.66 precipitation 0.1 90 < th dose independent rect. 23 10
39 33.66 precipitation 0.1 90 < th dose dependent rect. 23 10
42 33.68 humidity 70.0 270 > th dose independent rect. 21 11
43 33.69 humidity 60.0 90 > th dose independent rect. 23 10
44 33.69 radiation 40.0 90 < th dose independent rect. 23 10
45 33.69 precipitation 0.1 270 < th dose independent rect. 21 11
46 33.69 precipitation 0.1 270 < th dose dependent rect. 21 11
48 33.71 precipitation 0.1 270 < th dose independent rect. 4 13
49 33.71 precipitation 0.1 270 < th dose dependent rect. 4 13
50 33.72 wind 7.0 90 < th dose independent rect. 23 10
52 33.74 temperature 10.0 90 > th dose independent rect. 23 10
54 33.74 atmosphere 995.0 90 > th dose independent rect. 23 10
55 33.74 temperature 10.0 90 > th dose independent rect. 9 14
63 33.80 temperature 20.0 30 > th dose independent rect. 5 13
65 33.82 temperature 15.0 90 > th dose independent rect. 18 11
66 33.84 wind 9.0 270 < th dose independent rect. 17 11
67 33.84 wind 9.0 270 < th dose independent rect. 21 11
68 33.84 temperature 10.0 270 > th dose independent rect. 21 11
69 33.84 temperature 30.0 270 < th dose independent rect. 21 11
70 33.84 humidity 50.0 270 > th dose independent rect. 21 11
72 33.84 atmosphere 995.0 270 > th dose independent rect. 21 11
76 33.86 atmosphere 1015.0 90 < th dose independent rect. 9 14
77 33.86 radiation 40.0 720 < th dose independent rect. 19 14
81 33.91 wind 9.0 270 < th dose independent rect. 8 13
83 33.91 radiation 1.0 30 < th dose dependent rect. 18 18
92 33.94 temperature 30.0 90 < th dose independent rect. 23 10
94 33.96 radiation 20.0 270 < th dose independent rect. 17 11
97 33.96 temperature 10.0 270 > th dose independent rect. 4 13
98 33.96 atmosphere 1015.0 270 < th dose independent rect. 4 13
100 33.97 radiation 20.0 720 < th dose independent rect. 6 1
105 34.00 atmosphere 995.0 90 > th dose independent rect. 9 14
107 34.01 atmosphere 1005.0 30 > th dose independent rect. 9 14
113 34.08 temperature 10.0 720 > th dose independent rect. 7 6
114 34.08 atmosphere 995.0 720 > th dose independent rect. 7 6
115 34.08 atmosphere 1015.0 720 < th dose independent rect. 7 6
117 34.08 temperature 10.0 720 > th dose independent rect. 13 18
119 34.10 radiation 1.0 30 < th dose independent rect. 18 18
128 34.12 precipitation 0.1 720 < th dose independent rect. 7 6
136 34.12 precipitation 0.1 720 < th dose dependent rect. 7 6
137 34.13 humidity 60.0 720 > th dose independent rect. 19 6
138 34.13 atmosphere 995.0 270 > th dose independent rect. 17 11
148 34.19 radiation 40.0 270 < th dose dependent rect. 21 11
150 34.20 wind 9.0 270 < th dose independent rect. 4 13
153 34.20 radiation 40.0 270 < th dose dependent rect. 17 11
155 34.21 radiation 1.0 30 > th dose independent sin 13 NA
156 34.22 radiation 20.0 30 < th dose dependent sin 12 NA
165 34.25 humidity 50.0 90 > th dose independent rect. 18 11
171 34.26 wind 9.0 720 < th dose independent rect. 19 6
179 34.28 temperature 10.0 720 > th dose independent rect. 19 6
180 34.28 temperature 30.0 720 < th dose independent rect. 19 6
182 34.28 atmosphere 995.0 720 > th dose independent rect. 19 6
183 34.28 radiation 1.0 720 < th dose independent rect. 19 6
188 34.28 temperature 10.0 720 > th dose independent rect. 1 18
189 34.28 radiation 1.0 720 < th dose dependent rect. 19 6
199 34.29 atmosphere 1015.0 90 < th dose dependent rect. 5 13
203 34.30 atmosphere 995.0 270 > th dose dependent rect. 7 13
206 34.33 humidity 60.0 720 > th dose independent rect. 19 14
232 34.40 wind 9.0 720 < th dose independent rect. 7 6
240 34.42 wind 9.0 720 < th dose dependent rect. 6 1
241 34.43 temperature 20.0 30 > th dose independent rect. 14 4
248 34.46 temperature 15.0 270 > th dose dependent rect. 13 2
255 34.49 temperature 15.0 90 > th dose dependent rect. 13 5
258 34.50 precipitation 0.1 720 < th dose independent rect. 19 6
260 34.50 precipitation 0.1 720 < th dose dependent rect. 19 6
271 34.52 wind 1.0 90 > th dose independent rect. 9 14
273 34.53 temperature 15.0 720 > th dose independent rect. 17 2
292 34.59 atmosphere 1015.0 90 < th dose dependent rect. 13 5
294 34.60 humidity 70.0 720 > th dose independent rect. 5 2
298 34.61 radiation 1.0 30 < th dose independent sin 13 NA
300 34.61 atmosphere 1015.0 270 < th dose dependent rect. 13 2
302 34.62 precipitation 0.1 720 < th dose independent rect. 5 2
303 34.62 precipitation 0.1 720 < th dose dependent rect. 5 2
309 34.64 wind 9.0 720 < th dose independent rect. 19 14
313 34.65 radiation 1.0 90 > th dose independent rect. 11 23
319 34.66 temperature 15.0 30 > th dose independent rect. 18 20
321 34.66 humidity 50.0 720 > th dose dependent rect. 5 2
324 34.67 temperature 10.0 720 > th dose independent rect. 9 10
325 34.67 atmosphere 1015.0 720 < th dose independent rect. 9 10
327 34.67 temperature 10.0 720 > th dose independent rect. 19 14
329 34.67 atmosphere 995.0 720 > th dose independent rect. 19 14
343 34.68 radiation 1.0 720 < th dose dependent rect. 24 6
345 34.69 wind 7.0 720 < th dose independent rect. 5 2
347 34.69 temperature 10.0 720 > th dose independent rect. 5 2
348 34.69 temperature 30.0 720 < th dose independent rect. 5 2
349 34.69 humidity 50.0 720 > th dose independent rect. 5 2
351 34.69 atmosphere 995.0 720 > th dose independent rect. 5 2
352 34.69 atmosphere 1015.0 720 < th dose independent rect. 5 2
355 34.69 temperature 10.0 720 > th dose independent rect. 7 22
381 34.75 radiation 1.0 30 < th dose dependent rect. 16 14
383 34.76 temperature 20.0 270 > th dose independent rect. 13 2
384 34.76 precipitation 0.1 720 < th dose independent rect. 17 2
386 34.76 precipitation 0.1 720 < th dose dependent rect. 17 2
390 34.77 wind 9.0 720 < th dose independent rect. 17 2
400 34.79 radiation 40.0 720 < th dose dependent rect. 17 2
403 34.81 temperature 30.0 10 < th dose independent rect. 18 12
408 34.82 atmosphere 1015.0 90 < th dose independent rect. 23 10
417 34.83 atmosphere 1015.0 720 < th dose independent rect. 17 2
418 34.83 radiation 30.0 720 < th dose independent rect. 17 2
430 34.83 temperature 10.0 720 > th dose independent rect. 19 22
433 34.84 radiation 40.0 720 < th dose independent rect. 4 5
434 34.84 precipitation 0.1 720 < th dose independent rect. 5 11
437 34.84 precipitation 0.1 720 < th dose dependent rect. 5 11
460 34.87 radiation 1.0 720 < th dose independent rect. 18 1
466 34.87 radiation 1.0 30 < th dose dependent rect. 16 22
477 34.89 radiation 1.0 30 < th dose dependent rect. 16 20
483 34.90 radiation 10.0 720 < th dose dependent rect. 18 1
498 34.91 radiation 1.0 30 < th dose dependent rect. 11 19
514 34.93 radiation 1.0 30 < th dose dependent rect. 13 17
528 34.95 temperature 30.0 30 < th dose independent rect. 18 20
546 34.97 humidity 50.0 720 > th dose independent rect. 18 1
577 35.01 humidity 90.0 30 < th dose independent rect. 14 4
589 35.03 temperature 30.0 90 < th dose independent rect. 9 14
598 35.06 temperature 10.0 720 > th dose independent rect. 5 11
600 35.06 atmosphere 1015.0 720 < th dose independent rect. 5 11
604 35.06 temperature 10.0 720 > th dose independent rect. 16 13
606 35.06 radiation 40.0 720 < th dose independent rect. 16 13
608 35.06 radiation 1.0 30 < th dose dependent no NA NA
618 35.06 radiation 1.0 30 < th dose dependent rect. 13 23
643 35.10 temperature 10.0 1440 > th dose independent rect. 7 12
646 35.10 temperature 10.0 1440 > th dose independent rect. 19 12
650 35.10 temperature 30.0 1440 < th dose independent rect. 19 12
654 35.10 humidity 50.0 1440 > th dose independent rect. 19 12
656 35.10 atmosphere 995.0 1440 > th dose independent rect. 19 12
657 35.10 radiation 40.0 1440 < th dose independent rect. 19 12
672 35.11 temperature 10.0 1440 > th dose independent rect. 15 4
676 35.11 precipitation 0.1 30 < th dose independent rect. 14 4
679 35.11 temperature 10.0 1440 > th dose independent rect. 19 20
683 35.11 precipitation 0.1 30 < th dose dependent rect. 14 4
686 35.12 wind 9.0 30 < th dose independent rect. 14 4
695 35.13 wind 9.0 720 < th dose independent rect. 16 13
699 35.13 atmosphere 995.0 90 > th dose dependent rect. 9 5
701 35.14 temperature 10.0 30 > th dose independent rect. 14 4
703 35.14 atmosphere 1010.0 30 < th dose independent rect. 14 4
712 35.14 atmosphere 995.0 30 > th dose independent rect. 18 20
719 35.15 wind 1.0 30 > th dose independent rect. 14 4
729 35.17 precipitation 0.1 720 < th dose independent rect. 13 3
732 35.17 precipitation 0.1 720 < th dose dependent rect. 13 3
742 35.19 temperature 15.0 270 > th dose independent rect. 15 22
745 35.20 radiation 40.0 30 < th dose independent rect. 14 4
747 35.20 precipitation 0.1 270 < th dose independent rect. 8 13
751 35.20 precipitation 0.1 270 < th dose dependent rect. 8 13
757 35.21 wind 1.0 30 > th dose independent rect. 5 13
778 35.24 atmosphere 995.0 270 > th dose dependent rect. 9 2
785 35.25 atmosphere 1015.0 720 < th dose dependent rect. 6 1
794 35.26 wind 9.0 30 < th dose independent rect. 18 20
798 35.27 temperature 10.0 1440 > th dose independent rect. 19 10
801 35.27 temperature 30.0 1440 < th dose independent rect. 19 10
805 35.27 humidity 50.0 1440 > th dose independent rect. 19 10
807 35.27 atmosphere 995.0 1440 > th dose independent rect. 19 10
808 35.27 radiation 20.0 1440 < th dose independent rect. 19 10
837 35.29 wind 1.0 270 > th dose independent rect. 13 2
873 35.31 precipitation 0.1 270 < th dose independent rect. 12 13
876 35.31 precipitation 0.1 270 < th dose dependent rect. 12 13
884 35.32 atmosphere 1015.0 720 < th dose independent rect. 1 18
885 35.32 precipitation 0.1 270 < th dose independent rect. 11 22
891 35.32 precipitation 0.1 270 < th dose dependent rect. 11 22
908 35.35 wind 7.0 720 < th dose independent rect. 1 3
909 35.35 temperature 10.0 720 > th dose independent rect. 13 3
910 35.35 atmosphere 1015.0 720 < th dose independent rect. 13 3
929 35.37 atmosphere 995.0 720 > th dose independent rect. 18 1
930 35.37 temperature 30.0 90 < th dose independent rect. 9 5
934 35.37 wind 9.0 270 < th dose independent rect. 15 22
941 35.38 temperature 10.0 720 > th dose independent rect. 1 3
942 35.38 temperature 30.0 720 < th dose independent rect. 1 3
943 35.38 humidity 50.0 720 > th dose independent rect. 1 3
946 35.38 atmosphere 995.0 720 > th dose independent rect. 1 3
947 35.38 radiation 1.0 720 < th dose independent rect. 1 3
955 35.38 temperature 10.0 720 > th dose independent rect. 4 21
956 35.38 radiation 1.0 720 < th dose dependent rect. 1 3
967 35.39 radiation 40.0 720 < th dose dependent rect. 5 2
968 35.39 temperature 10.0 90 > th dose dependent rect. 18 11
971 35.39 temperature 20.0 30 > th dose dependent rect. 24 18
973 35.40 wind 9.0 270 < th dose independent rect. 13 2
982 35.40 radiation 40.0 30 < th dose independent rect. 6 12
986 35.40 wind 9.0 720 < th dose independent rect. 1 18