Os03g0638200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transporter-like protein.
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Os03g0638200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Transporter-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 220.97 | 0.698 | 9.42 | -3.3 | 3.21 | -5.77 | 5.81 | 3.97 | -1.07 | 7.43 | 8.906 | 272 | 15.1 | -- |
| 220.87 | 0.692 | 9.48 | -3.43 | 1.97 | -7.2 | 3.44 | -- | -1.15 | 9.08 | 0.3645 | 376 | 16 | -- |
| 279.46 | 0.779 | 9.53 | -3.65 | 2.62 | -6 | -- | -1.64 | -1.41 | 7.87 | 3.541 | 328 | 15.6 | -- |
| 274.31 | 0.771 | 9.47 | -3.35 | 1.87 | -6.94 | -- | -- | -1.14 | 7.78 | 3.455 | 394 | 15.8 | -- |
| 270.49 | 0.766 | 9.57 | -2.98 | -- | -8.41 | -- | -2.09 | -1.04 | -- | -1.077 | 359 | 14.7 | -- |
| 359.02 | 0.888 | 9.43 | -4.05 | 7.3 | -- | 4.16 | -- | -1.43 | 6.13 | -- | -- | -- | -- |
| 400.74 | 0.937 | 9.45 | -4.01 | 7.33 | -- | -- | -- | -1.45 | 6.06 | -- | -- | -- | -- |
| 273.01 | 0.77 | 9.53 | -3.36 | -- | -8.63 | -- | -- | -1.13 | -- | -3.621 | 426 | 15.5 | -- |
| 525.21 | 1.07 | 9.38 | -- | 0.745 | -10.3 | -- | -- | -0.433 | 15.5 | -19 | 1041 | 21.2 | -- |
| 3182.83 | 2.64 | 9.57 | -3.8 | -- | -- | -- | -- | -1.29 | -- | -- | -- | -- | -- |
| 825.24 | 1.34 | 9.34 | -- | 7.27 | -- | -- | -- | -1 | 6.09 | -- | -- | -- | -- |
| 524.68 | 1.07 | 9.38 | -- | -- | -9.73 | -- | -- | -0.457 | -- | -18.46 | 1056 | 21.1 | -- |
| 3564.27 | 2.79 | 9.48 | -- | -- | -- | -- | -- | -0.864 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 222.13 | temperature | 10 | 270 | > th | dose dependent | sin | 21 | NA |
| 3 | 228.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 10 |
| 4 | 228.59 | temperature | 10 | 90 | > th | dose dependent | sin | 19 | NA |
| 10 | 231.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 13 |
| 19 | 235.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 20 | 235.36 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 13 |
| 33 | 238.27 | temperature | 30 | 270 | < th | dose dependent | sin | 19 | NA |
| 39 | 238.98 | temperature | 30 | 90 | < th | dose dependent | sin | 17 | NA |
| 57 | 241.05 | temperature | 10 | 720 | > th | dose dependent | sin | 2 | NA |
| 66 | 241.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 14 |
| 85 | 243.66 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 89 | 244.23 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 91 | 244.25 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 98 | 244.55 | temperature | 25 | 270 | > th | dose independent | sin | 21 | NA |
| 105 | 244.98 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 14 |
| 121 | 245.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 124 | 245.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 125 | 245.84 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 139 | 246.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 18 |
| 153 | 246.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 5 |
| 155 | 246.95 | temperature | 25 | 270 | < th | dose independent | sin | 19 | NA |
| 175 | 247.62 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 23 |
| 202 | 248.53 | temperature | 15 | 30 | > th | dose dependent | rect. | 7 | 14 |
| 235 | 249.17 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 277 | 250.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 313 | 250.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 7 |
| 340 | 251.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 5 |
| 376 | 252.03 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 382 | 252.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 383 | 252.12 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 391 | 252.32 | temperature | 25 | 4320 | < th | dose dependent | rect. | 6 | 6 |
| 422 | 252.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 446 | 253.14 | radiation | 1 | 270 | > th | dose independent | rect. | 9 | 23 |
| 451 | 253.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 488 | 253.69 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 17 |
| 549 | 254.58 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 13 |
| 591 | 255.09 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 598 | 255.15 | temperature | 30 | 720 | < th | dose independent | sin | 23 | NA |
| 620 | 255.31 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 624 | 255.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 7 |
| 654 | 255.59 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 704 | 256.06 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 14 |
| 758 | 256.48 | temperature | 25 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 770 | 256.55 | temperature | 25 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 778 | 256.58 | radiation | 1 | 720 | < th | dose independent | sin | 13 | NA |
| 802 | 256.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 848 | 257.12 | radiation | 1 | 720 | < th | dose dependent | sin | 12 | NA |
| 878 | 257.34 | temperature | 25 | 4320 | < th | dose dependent | rect. | 7 | 17 |
| 905 | 257.54 | temperature | 30 | 720 | < th | dose independent | rect. | 6 | 23 |
| 921 | 257.62 | temperature | 25 | 4320 | < th | dose dependent | sin | 0 | NA |