BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0620400 Os03g0620400|AK102169
(519 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0620400 Transcriptional factor B3 family protein 1035 0.0
Os03g0619600 Transcriptional factor B3 family protein 405 e-113
Os03g0619825 Transcriptional factor B3 family protein 256 2e-68
Os03g0620500 Transcriptional factor B3 family protein 198 8e-51
Os03g0619850 180 3e-45
Os03g0621600 Transcriptional factor B3 family protein 161 8e-40
Os03g0621800 139 4e-33
Os12g0592300 Transcriptional factor B3 family protein 134 1e-31
Os03g0622200 Transcriptional factor B3 family protein 115 9e-26
Os03g0622100 Transcriptional factor B3 family protein 101 1e-21
Os12g0591400 Transcriptional factor B3 family protein 75 1e-13
Os08g0324300 Transcriptional factor B3 family protein 68 1e-11
>Os03g0620400 Transcriptional factor B3 family protein
Length = 519
Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/519 (95%), Positives = 496/519 (95%)
Query: 1 MAGQGSQKKKSCDWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIE 60
MAGQGSQKKKSCDWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIE
Sbjct: 1 MAGQGSQKKKSCDWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIE 60
Query: 61 LVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDG 120
LVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDG
Sbjct: 61 LVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDG 120
Query: 121 CEKVFTCAGIKKTSSVQERNAAPVDISRSTHDETTQSSGSKKFVRCQRASDSQRGKTAKL 180
CEKVFTCAGIKKTSSVQERNAAPVDISRSTHDETTQSSGSKKFVRCQRASDSQRGKTAKL
Sbjct: 121 CEKVFTCAGIKKTSSVQERNAAPVDISRSTHDETTQSSGSKKFVRCQRASDSQRGKTAKL 180
Query: 181 AXXXXXXXXXXXXXXXXXXXXXXXYELDDPQMPPGRNYVLSRWTSLSEAQEEKVDMLVQD 240
A YELDDPQMPPGRNYVLSRWTSLSEAQEEKVDMLVQD
Sbjct: 181 AETSSSGESGEEGTDSSTSEDESSYELDDPQMPPGRNYVLSRWTSLSEAQEEKVDMLVQD 240
Query: 241 IQPEIPVFVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIR 300
IQPEIPVFVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIR
Sbjct: 241 IQPEIPVFVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIR 300
Query: 301 KDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRETKSGSLGSFHTS 360
KDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRETKSGSLGSFHTS
Sbjct: 301 KDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRETKSGSLGSFHTS 360
Query: 361 HKRFDLRDGRTWPKVTGVRRVSSRPYLTADRVSLTEEQVRKVEEVVHSIQSEGPMYVSIM 420
HKRFDLRDGRTWPKVTGVRRVSSRPYLTADRVSLTEEQVRKVEEVVHSIQSEGPMYVSIM
Sbjct: 361 HKRFDLRDGRTWPKVTGVRRVSSRPYLTADRVSLTEEQVRKVEEVVHSIQSEGPMYVSIM 420
Query: 421 NKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGW 480
NKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGW
Sbjct: 421 NKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGW 480
Query: 481 RHFVHDNHLQIEDICLFQLMNDESKLTMTVHIIRRNEKS 519
RHFVHDNHLQIEDICLFQLMNDESKLTMTVHIIRRNEKS
Sbjct: 481 RHFVHDNHLQIEDICLFQLMNDESKLTMTVHIIRRNEKS 519
>Os03g0619600 Transcriptional factor B3 family protein
Length = 536
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 249/553 (45%), Positives = 318/553 (57%), Gaps = 55/553 (9%)
Query: 1 MAGQGSQKKKSCDWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIE 60
MAG GS KKSC ++Y++HL+GKM CF +M+A+ SM +P KF++HFGG S TI+
Sbjct: 1 MAGSGSCMKKSCVCCQKYLEHLDGKMNCFVRRMTADSRRSMIMPCKFVNHFGGDFSGTIK 60
Query: 61 LVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDG 120
L SP GI+Y+V+VT+ NKT+L+CGWEAFVDAHHIEENDSLLFR +ENSRFEVLI DSD
Sbjct: 61 LQSPNGILYVVEVTKCKNKTVLRCGWEAFVDAHHIEENDSLLFRCVENSRFEVLIFDSDD 120
Query: 121 CEKVFTCAGIKKTS-SVQERNAAPVDISRSTHDETTQSSGSKKFVRCQRASDSQRGKTAK 179
CEKVF+CAGI+ T S+QE+ S S+ D+T +SS S+ F R Q+ S S R KTA
Sbjct: 121 CEKVFSCAGIRNTCKSIQEK-------SSSSCDDTAESSESEGFARNQKGSFSHRRKTAN 173
Query: 180 LAXXXXXXXXXXXXXXXXXXXXXXXYELDDPQMPPGRNYVLSRWTSLSEAQEEKVDMLVQ 239
LA +L+ Q P YVLSR + LSE Q+EKVD L+Q
Sbjct: 174 LASSSEDSGEDSPSEHESVESG----DLETSQEP----YVLSRRSYLSEFQKEKVDALIQ 225
Query: 240 DIQPEIPVFVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYI 299
+IQPE FVAIM+ SNV LVI YA HFP +S T+TLQR K+KKW+P FY
Sbjct: 226 EIQPETTAFVAIMRKSNVQLPTPFLVISFCYAEVHFPHKSVTVTLQRPCKSKKWHPRFYK 285
Query: 300 RKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRETKSGSLGSFHT 359
RKD +L G W FV+DN V+E D+C+F TK F TVHLLR + S G T
Sbjct: 286 RKDARMNILRGSWVEFVKDNRVQEQDICVFVPTKDARRNFTFTVHLLRVAAAYSWGG--T 343
Query: 360 SHKRFDLRDGRTWPK-----------VTGVRRVSSR---------------------PYL 387
R GRT K + VSSR PY+
Sbjct: 344 GVDRAGSSLGRTDVKSASEISIKEEPIDQEENVSSRNRNGVSDESEEDEDSEGPAHPPYI 403
Query: 388 TADRVSLTEEQVRKVEEVVHSIQSEGPMYVSIMNKSNVGTDGLYIII-FGRQFATR-YLP 445
+ L+ Q + VEE V S QS+ P+YV+IM KSNV + G +FA +LP
Sbjct: 404 VPCKSHLSRLQKKIVEEKVRSFQSKFPVYVAIMKKSNVERSASRCQLELGARFAAAVHLP 463
Query: 446 EGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICLFQLMNDES- 504
+ QT+ L G+ W M+ RSG +++ +GW FV DN L++ DICLF+ E
Sbjct: 464 DRRQTVVLQRRGER--WATVMQIRSGTRRLLISGWHRFVRDNRLRVGDICLFEFKTHERW 521
Query: 505 KLTMTVHIIRRNE 517
+LTM VH I R +
Sbjct: 522 RLTMAVHAIFREQ 534
>Os03g0619825 Transcriptional factor B3 family protein
Length = 300
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/280 (49%), Positives = 177/280 (63%), Gaps = 15/280 (5%)
Query: 1 MAGQGSQKKKSCDWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIE 60
MAG + +KKSC K Y++HL GKM+CF +M+A+ HSM +P++F+ HFGG + TI+
Sbjct: 1 MAGGNTHRKKSCACCKEYLEHLGGKMRCFLRRMAADSMHSMIMPDRFVSHFGGKIPGTIK 60
Query: 61 LVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDG 120
L SP GI+Y+V+VTE MNKT+LQCGWEAFVDAH+I+E +SLLFRHIENSR+EVLILDSD
Sbjct: 61 LESPNGILYVVEVTECMNKTLLQCGWEAFVDAHNIKEGESLLFRHIENSRYEVLILDSDD 120
Query: 121 CEKVFTCAGIKKTSSVQERNAAPVDISRSTHDETTQSSGSKK----FVRCQRASDS---- 172
CEKVF+CAGI+ S VQ++ PVD S S+ ++TTQSS S+ C + S
Sbjct: 121 CEKVFSCAGIRNGSCVQDKTVDPVDSSGSSSNDTTQSSRSRNTENLTAMCSSSEKSGNIF 180
Query: 173 ----QRGKTAKLAXXXXXXXXXXXXXXXXXXXXXXXYELD---DPQMPPGRNYVLSRWTS 225
+ L YE +PQ P G +YVLSR T
Sbjct: 181 YIIWKCASNFGLLYMQFTQEIEPLGKFCTGEDSPSGYEFHESVEPQTPSGSDYVLSRRTY 240
Query: 226 LSEAQEEKVDMLVQDIQPEIPVFVAIMKHSNVNSRRACLV 265
LSEAQ+E+V +QDIQPEI VFVA+MK N+ S LV
Sbjct: 241 LSEAQKERVVTHIQDIQPEITVFVAVMKKCNLQSPAPYLV 280
>Os03g0620500 Transcriptional factor B3 family protein
Length = 111
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 91/111 (81%), Positives = 98/111 (88%)
Query: 1 MAGQGSQKKKSCDWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIE 60
MAGQGSQ KK CD KRYVDH NGKMKCFH QMSANF HSM IPNKFLD FGG +SRT+E
Sbjct: 1 MAGQGSQMKKYCDCCKRYVDHSNGKMKCFHRQMSANFEHSMIIPNKFLDQFGGKISRTVE 60
Query: 61 LVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRF 111
L SPKG VY+VKV++HMNKT+LQCGWEAFVDAH IEENDSLLFRHI+NSRF
Sbjct: 61 LESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLLFRHIKNSRF 111
>Os03g0619850
Length = 253
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 101/124 (81%)
Query: 1 MAGQGSQKKKSCDWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIE 60
MAG GS+ KKSC KRY++HL GKM CF ++M+ + HSM IP++F++HFGG + TI+
Sbjct: 1 MAGGGSRMKKSCACCKRYLEHLGGKMSCFLIRMTTDSMHSMIIPDRFVNHFGGKIPGTIK 60
Query: 61 LVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDG 120
L SP GI+Y+V+VTE MNKT+LQCGWEAFVDAHHI+ DSLLFRHIENS FEV+ILDSDG
Sbjct: 61 LESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLLFRHIENSCFEVMILDSDG 120
Query: 121 CEKV 124
E V
Sbjct: 121 SENV 124
>Os03g0621600 Transcriptional factor B3 family protein
Length = 973
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 164/327 (50%), Gaps = 25/327 (7%)
Query: 20 DHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNK 79
+H++G+ K F M F M IPN+FL +F G + RTI+L G Y V+VT+++ K
Sbjct: 669 NHIDGQYKNFFKVMIGRFRERMIIPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGK 728
Query: 80 TILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDGCEKVFTCAGIKKTSSVQER 139
LQ GW+AFV AH ++ D L+F + S+ +VLI GCEKV + + +K + E+
Sbjct: 729 ISLQSGWKAFVTAHDLQMGDFLVFSYDGISKLKVLIFGPSGCEKVHSRSTLKNATHCGEK 788
Query: 140 NAAPVDISRSTHDETTQSSGSKKFVRCQRASDSQRGKTAKLAXXXXXXXXXXXXXXXXXX 199
P+ IS ++HD +S + Q S Q TA +
Sbjct: 789 WEEPLHISSNSHDLPVKSPQNVSKSEKQWDSSEQENDTANIE------------------ 830
Query: 200 XXXXXYELDDPQMPPGRNYVLSRWTSLSEAQEEKVDMLVQDIQPEIPVFVAIMKHSNVNS 259
+ DD Q P N +L + T L++ Q+++++ V I EIP++ I++ S V+
Sbjct: 831 --EVALQGDDLQGHPVLNCILPKHTRLTDMQKQQLESKVGAIHSEIPIYGCILRKSRVHG 888
Query: 260 RRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDN 319
+ + I + YA + P + +TLQR GKN + + KD L W F ++N
Sbjct: 889 KSQTVDICREYADVYLPFKELNMTLQRHGKN---WEVLCRTKDTRTKRLSTGWSRFAQEN 945
Query: 320 HVKEGDMCIFHLTKFTGGEFGATVHLL 346
+++ GD+C+F L K E+ VH++
Sbjct: 946 NLQVGDICLFELLK--KKEYSMNVHII 970
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 131/311 (42%), Gaps = 34/311 (10%)
Query: 29 FHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEA 88
F M F MTIP KF ++F + TI+L + G V V + NK +L GW
Sbjct: 94 FFKVMIGGFRRQMTIPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAE 153
Query: 89 FVDAHHIEENDSLLFRHIENSRFEVLILDSDGCEKVFTCAGIKKTSSVQERNAAPVDISR 148
F ++H I+ D L+FR+ NS+FEV I D GC K + + Q P++I
Sbjct: 154 FANSHDIKMGDFLVFRYTGNSQFEVKIFDPSGCVKAASHNAVNIGQHAQNMQGDPIEI-- 211
Query: 149 STHDETTQSSGSKKFVRCQRASDSQRGKTAKLAXXXXXXXXXXXXXXXXXXXXXXXYELD 208
S S + +R Q + ++ + K D
Sbjct: 212 --------LSCSDEHLRAQSLTTERQNQPEKDVIDNCNKKMKTEHASSSE---------D 254
Query: 209 DPQMPPGRNYVLSRWTSLSEAQEEKVDMLVQDIQPEIPVFVAIMKHSNVNSRRACLVIPK 268
D + P +E KV+ +V+ I PVFVA+MK SNV + + I +
Sbjct: 255 DQETP------------TAEVHRMKVEEMVRAIHSNHPVFVAVMKKSNVTRQPCYVAISR 302
Query: 269 RYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCI 328
+YA+ +FP Q +TLQR G K+W F I K ML W+ F RDN ++
Sbjct: 303 KYANEYFPGGDQMLTLQRHG--KRWQVKFCISKR-KLRMLSKGWRKFTRDNELQHWAPLA 359
Query: 329 FHLTKFTGGEF 339
+T F F
Sbjct: 360 LFITLFFSPHF 370
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 126/278 (45%), Gaps = 32/278 (11%)
Query: 27 KCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGW 86
K F M +F MTIP+KF HF G +S+TI+L G + V+VT+ +N +L GW
Sbjct: 395 KYFFKVMIGDFHKRMTIPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGW 454
Query: 87 EAFVDAHHIEENDSLLFRHIENSRFEVLILDSDGCEKVFTCAGIKKTSSVQERNAAPVDI 146
E+FV+AH + D L+F++ + +VLI D GCEK +C+ V + DI
Sbjct: 455 ESFVNAHDLNMGDFLVFKYNGDFLLQVLIFDPSGCEKSTSCSMENAIDHVGQGWKEHNDI 514
Query: 147 SRSTHDETTQSSGSKKFVRCQRASDSQRGKTAKLAXXXXXXXXXXXXXXXXXXXXXXXYE 206
S S HD Q G+K ++ Q+ S S+ K
Sbjct: 515 STSYHD---QPKGNKHWM--QKDSSSKGNKIGNTRSS----------------------- 546
Query: 207 LDDPQMPPGRNYVLSRWTSLSEAQEEKVDMLVQDIQPEIPVFVAIMKHSNVNSRRACLVI 266
+ P G +L R T L QE+K+ +Q I + P++ +M NV+ L I
Sbjct: 547 -NTPSKFSG--CILPRGTCLPVVQEKKMKEKIQAIHSKTPMYGNVMTKCNVSGSPCVLEI 603
Query: 267 PKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGS 304
+ Y A+ P + + R ++K W FY K+ S
Sbjct: 604 TQLYDDAYLPFNNGQELMLRH-RDKSWKVRFYRFKNKS 640
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 394 LTEEQVRKVEEVVHSIQSEGPMYVSIMNKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTL 453
LT+ Q +++E V +I SE P+Y I+ KS V + I R++A YLP E +TL
Sbjct: 855 LTDMQKQQLESKVGAIHSEIPIYGCILRKSRVHGKSQTVDI-CREYADVYLPFKELNMTL 913
Query: 454 LMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICLFQLMNDESKLTMTVHII 513
GK+ W+V R + + ++TGW F +N+LQ+ DICLF+L+ + + +M VHII
Sbjct: 914 QRHGKN--WEVLCRTKDTRTKRLSTGWSRFAQENNLQVGDICLFELLK-KKEYSMNVHII 970
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 401 KVEEVVHSIQSEGPMYVSIMNKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSN 460
KVEE+V +I S P++V++M KSNV Y+ I R++A Y P G+Q LTL GK
Sbjct: 267 KVEEMVRAIHSNHPVFVAVMKKSNVTRQPCYVAI-SRKYANEYFPGGDQMLTLQRHGKR- 324
Query: 461 AWQVKMRPRSGDAQMITTGWRHFVHDNHLQ 490
WQVK +M++ GWR F DN LQ
Sbjct: 325 -WQVKFCISKRKLRMLSKGWRKFTRDNELQ 353
>Os03g0621800
Length = 365
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 164/335 (48%), Gaps = 51/335 (15%)
Query: 13 DWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVK 72
DW++ NG+ K F M +F +TIPN+FL +FGG + ++I+L + G+ + V+
Sbjct: 80 DWNR-----TNGEDKHFFKVMLGDFHERVTIPNEFLHNFGGKIPKSIKLETRSGLTFDVQ 134
Query: 73 VTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDGCEKVFTCAGIKK 132
VT++ + +LQ GW ++V AH ++ D L+F++ +S+ + LI DS GCEKV C
Sbjct: 135 VTKNSGRVVLQSGWASYVSAHDLKIGDFLVFKYSGDSQLKTLIFDSSGCEKV--C----- 187
Query: 133 TSSVQERNAAPVDISRSTHDETTQSSGSKKFVRCQRASDSQRGKTAKLAXXXXXXXXXXX 192
PVD+S ++D ++S +K R QR D R T K +
Sbjct: 188 --------EKPVDMSGRSYDIAMRNSQDEKKKRKQR--DISRQGTVKPSE---------- 227
Query: 193 XXXXXXXXXXXXYELDDPQMPPGRNYVLSRWTSLSEAQEEKVDMLVQDIQPEIPVFVAIM 252
E ++ PG +L T L+ Q+ + V+ I E P++ +M
Sbjct: 228 -------------EGLKAELVPG--CILPSRTDLTRLQKNILIEKVKAINSETPIYGYVM 272
Query: 253 KHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCW 312
+S+++ + I K+YA + P E T+ LQ GK+ W + K S L G W
Sbjct: 273 NNSSIHGIPCTVEISKKYADVYLPFEDGTVVLQHHGKS--WNVRCCLTKQNSKRFLKG-W 329
Query: 313 KNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLR 347
+ F DN + GD+C+F L K ++ VH++R
Sbjct: 330 RQFAGDNKLHLGDICLFDLLK-DKKKYVMDVHIIR 363
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 367 RDGRTWPKVTGVRRVSSRPYLTADRVSLTEEQVRKVEEVVHSIQSEGPMYVSIMNKSNVG 426
R G P G++ + R LT Q + E V +I SE P+Y +MN S++
Sbjct: 219 RQGTVKPSEEGLKAELVPGCILPSRTDLTRLQKNILIEKVKAINSETPIYGYVMNNSSIH 278
Query: 427 TDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHD 486
+ I +++A YLP + T+ L GKS W V+ +++ GWR F D
Sbjct: 279 GIPCTVEI-SKKYADVYLPFEDGTVVLQHHGKS--WNVRCCLTKQNSKRFLKGWRQFAGD 335
Query: 487 NHLQIEDICLFQLMNDESKLTMTVHIIRR 515
N L + DICLF L+ D+ K M VHIIRR
Sbjct: 336 NKLHLGDICLFDLLKDKKKYVMDVHIIRR 364
>Os12g0592300 Transcriptional factor B3 family protein
Length = 366
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 29/350 (8%)
Query: 5 GSQKKKSC-DWSKR-YVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELV 62
G + +SC +W + Y +H++ F M+ +F H ++IP K D F G +++ L
Sbjct: 2 GEKGCESCREWQEHCYREHMDVSRIRFFRLMTGDFAHGISIPEKVADRFSGQITKGFNLK 61
Query: 63 SPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLF----RHIENSRFEVLILDS 118
+P G + V V + ++ IL GWE F AH ++END L F R + F+VLI D+
Sbjct: 62 APSGETWRVSVEKVADELILMSGWEDFAKAHELQENDLLFFTCNGRCNGSFSFDVLIFDA 121
Query: 119 DGCEKVFTCAGIKKTSSV--QERNAAPVDISRSTHDETTQSSGSKKFVRCQRASDSQR-- 174
GCEKV +C I K +S+ Q +NA +S S E T + + +AS S++
Sbjct: 122 SGCEKV-SCFFIGKKNSIGGQTQNAEQYHLSDS---EDTSTPSTFLVGSPHKASTSKKLN 177
Query: 175 GKTAKLAXXXXXXXXXXXXXXXXXXXXXXXYELDDPQMPPGR---------NYVLSRWTS 225
GKT +E+ + + +Y SR+ +
Sbjct: 178 GKTKTNPNKDDPFSTGKEPEDPNSSRSHVKHEMIEEEKSDDDDEHADYEHADYYYSRFAN 237
Query: 226 LSEAQEEKVDMLVQDIQPEIPVFVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQ 285
+E + + +QP PVFV +++ ++ R+ L++P +A+ H SQ I L
Sbjct: 238 YLTGEEREEIFSLVSLQPGNPVFVTVLQAPQIH-RKGLLIVPSGFAADHLDSRSQEILLM 296
Query: 286 RQGKNKKWYPMFYIRKDGSGYMLYGC--WKNFVRDNHVKEGDMCIFHLTK 333
R K +KWY +Y G + C W F+R+N ++EG +CIF L K
Sbjct: 297 RPNKKEKWYVKYYHASTTRG---FNCQRWIKFIRENRLREGYICIFELMK 343
>Os03g0622200 Transcriptional factor B3 family protein
Length = 378
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 153/379 (40%), Gaps = 59/379 (15%)
Query: 9 KKSCDWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIV 68
++ C WS H+ K F M +F SMT+P +F ++F G +S + L SP G
Sbjct: 17 QEHCYWS-----HMADHSKHFLKHMVGDFTESMTVPARFANNFNGHISEEVNLRSPSGET 71
Query: 69 YIVKVTEH-MNKTILQCGWEAFVDAHHIEENDSLLFRHIE-NSRFEVLILDSDGCEKVFT 126
+ + V + +LQ GW+ FVD + IEE D LLFR+ +S F+VLI D GCEK
Sbjct: 72 WSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEK--- 128
Query: 127 CAGIKKTSSVQERNAAPVDISRSTHDETTQSSGSKKFVRCQRAS----DSQRGKTAKLAX 182
A+P + S+G+++ R R + D G L
Sbjct: 129 --------------ASPHFVGSHGFGRAENSAGAEQGGRNGRRTPPIVDGDNGHRHHLEM 174
Query: 183 XXXXXXXXXXXXXXXXXXXXXXYELDD---------PQMPPGR--NYVLSRWTSLSE--- 228
E + GR Y SR ++E
Sbjct: 175 TLHRNSCRSIPRACKRSLFSDETEAKENDGEDEDVVAAAEGGRYGEYYFSRHGRVAEYNL 234
Query: 229 --AQEEKVDMLVQDIQPEIPVFVAIMKHSNVNSRRACLV-IPKRYASAHFPLESQTITLQ 285
E++ + +QP PVFV ++ S+V S + C+V + +A + + + L+
Sbjct: 235 REEDREEISRVPVPVQPGNPVFVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVVLE 294
Query: 286 RQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGA---- 341
R + +W+ F R++ G+ G W+ F DN + D+C+F LT G
Sbjct: 295 RASRGGEWHVPFVHRQNTRGFYGAG-WRQFAGDNRLVAHDVCLFELTMVDAAASGGGNRR 353
Query: 342 ---------TVHLLRETKS 351
TVH+LR +
Sbjct: 354 RRWSRRPTMTVHVLRRVRG 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 393 SLTEEQVRKVEEVVHSIQSEGPMYVSIMNKSNVGTDGLYIIIFGRQFATRYLPEGEQTLT 452
+L EE ++ V +Q P++V +++ S+V + I+ +FA +YL E+ +
Sbjct: 233 NLREEDREEISRVPVPVQPGNPVFVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVV 292
Query: 453 LLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICLFQL-MNDESK------ 505
L + W V R GWR F DN L D+CLF+L M D +
Sbjct: 293 LERASRGGEWHVPFVHRQNTRGFYGAGWRQFAGDNRLVAHDVCLFELTMVDAAASGGGNR 352
Query: 506 -------LTMTVHIIRR 515
TMTVH++RR
Sbjct: 353 RRRWSRRPTMTVHVLRR 369
>Os03g0622100 Transcriptional factor B3 family protein
Length = 382
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 156/370 (42%), Gaps = 37/370 (10%)
Query: 9 KKSCDWSKRYVDHLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIV 68
++ C WS H+ K F M +F SM +P++F ++F G +S + L SP G
Sbjct: 17 QEHCYWS-----HMADDCKHFLTYMVGDFTESMIVPSRFANNFNGHISEVVNLKSPSGKT 71
Query: 69 YIVKVT-EHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDGCEKVFTC 127
+ + V + +L+ GW+ FVDA+ ++END LLFR+ S F+VLI D GCEK
Sbjct: 72 WSIGVAYSDTGELVLRSGWKEFVDANGVQENDCLLFRYSGVSSFDVLIFDPSGCEKASPH 131
Query: 128 AGIKKTSSVQERNAAPVDISRST-----HDETTQSSGSKKFVRCQR-ASDSQRGKTAKLA 181
+ +E++A R H + + K RC+ S +RG L
Sbjct: 132 FVENRGFGREEKSAGAEGGGRDGDKNGHHQHQLEMTPHKNSSRCRSIPSACKRG----LF 187
Query: 182 XXXXXXXXXXXXXXXXXXXXXXXYELDDPQMPPGRNYVLSRWTSLSE-----AQEEKVDM 236
+ D + R Y ++E +E++
Sbjct: 188 SDEIEQDHREEKKEGDDEDEDEDEDEDVDKDGEDRYYFCRHGGRVTEYNLSKGDKEEISR 247
Query: 237 LVQDIQPEIPVFVAIMKHSN-VNSRRACLVIPKRYASAHF-PLESQTITLQR---QGKNK 291
+ ++P PV V ++ S+ ++SR + + + +A + P ++ + ++R G
Sbjct: 248 VPVPVEPGNPVLVKVIHASHLLSSRYSTVGVSPEFAGRYLGPAMAREVVMERGGGGGGGD 307
Query: 292 KWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFG----------A 341
+W+ F R+ G+ G W+ F RDN + D+C+F L G G
Sbjct: 308 QWHVRFVRRESSRGFHGTG-WRRFARDNGLLAHDVCLFELRLVDGAGAGDRLRRRPRPTM 366
Query: 342 TVHLLRETKS 351
VH+LR +
Sbjct: 367 AVHVLRRVRG 376
>Os12g0591400 Transcriptional factor B3 family protein
Length = 177
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 377 GVRRVSSRPYLTADRVSLTEEQVRKVEEVVHSIQSEGPMYVSIMNKSNVGTDGLYIIIFG 436
G+++ Y+ ++T Q +V + IQ + P+Y++ M+K++V + L +F
Sbjct: 5 GLQKSKKSCYVLPMLYNMTSAQESEVLALEKKIQPQIPLYITAMDKTSVASGSL---VFC 61
Query: 437 RQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICL 496
+ +A RYL + +T+ L +G S W + + + D ++TGW F N LQ DIC+
Sbjct: 62 KDYAVRYLLDQNRTIKLCQSGGSKTWDISLDMDTDDLYALSTGWLDFFRCNLLQEGDICV 121
Query: 497 FQLMNDESKLTMTVHIIRRN 516
F+ + + +T H + +
Sbjct: 122 FEASKSKRGVALTFHPFKES 141
>Os08g0324300 Transcriptional factor B3 family protein
Length = 270
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 11 SCDWSKRYVD----HLNGKMKCFHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKG 66
SC+ +R + +L+ K F L M +F H M IP +F+ G + I+L +
Sbjct: 4 SCERCRRRDEQDYRNLDDSQKHFLLTMMGDFQHEMIIPKEFVQRLKGDIPGEIQLETRNR 63
Query: 67 IVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSDGCEKVFT 126
+ V+V + K I GW FV ++ DS++FR NS+F+V+I+D G EK
Sbjct: 64 NSHTVRVDKTQEKVIFTEGWAQFVKTFDLQMGDSMMFRFNGNSQFDVIIVDQIGREKA-- 121
Query: 127 CAGI---KKTSSVQER 139
C+ + + +VQER
Sbjct: 122 CSAVVDDSQNPNVQER 137
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.133 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,876,029
Number of extensions: 673423
Number of successful extensions: 1590
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 1556
Number of HSP's successfully gapped: 24
Length of query: 519
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 414
Effective length of database: 11,553,331
Effective search space: 4783079034
Effective search space used: 4783079034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)