Os03g0622200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0622200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Transcriptional factor B3 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.35 | 0.549 | 9.06 | 0.526 | 0.925 | 0.719 | 0.167 | 1.99 | -0.397 | 15.4 | 22.1 | 1817 | -- | -- |
| 145.38 | 0.562 | 8.99 | 1.14 | 0.913 | 0.64 | 0.0931 | -- | -0.235 | 15.4 | 22.5 | 1925 | -- | -- |
| 136.39 | 0.544 | 9.06 | 0.508 | 0.922 | 0.698 | -- | 1.99 | -0.399 | 15.4 | 22.1 | 1838 | -- | -- |
| 145.41 | 0.562 | 8.99 | 1.14 | 0.913 | 0.641 | -- | -- | -0.235 | 15.4 | 22.5 | 1920 | -- | -- |
| 180 | 0.625 | 9.05 | 0.506 | -- | 0.75 | -- | 1.87 | -0.391 | -- | 22.25 | 1224 | -- | -- |
| 161.55 | 0.596 | 9.04 | 0.889 | 0.919 | -- | 0.0444 | -- | -0.467 | 15.3 | -- | -- | -- | -- |
| 161.56 | 0.595 | 9.04 | 0.89 | 0.919 | -- | -- | -- | -0.466 | 15.3 | -- | -- | -- | -- |
| 173.04 | 0.613 | 8.95 | 1.18 | -- | 1.01 | -- | -- | -0.122 | -- | 24.8 | 1141 | -- | -- |
| 170 | 0.607 | 9.03 | -- | 0.926 | 0.501 | -- | -- | -0.35 | 15.6 | 22.39 | 487 | -- | -- |
| 209.25 | 0.676 | 9.04 | 0.851 | -- | -- | -- | -- | -0.491 | -- | -- | -- | -- | -- |
| 182.45 | 0.632 | 9.06 | -- | 0.901 | -- | -- | -- | -0.566 | 15.3 | -- | -- | -- | -- |
| 207.49 | 0.671 | 9.01 | -- | -- | 0.734 | -- | -- | -0.34 | -- | 24.8 | 1102 | -- | -- |
| 228.36 | 0.705 | 9.06 | -- | -- | -- | -- | -- | -0.585 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.65 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 10 |
| 8 | 131.84 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 14 | 132.57 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 24 | 133.34 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 31 | 133.77 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 5 |
| 44 | 134.15 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 57 | 134.63 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 74 | 134.99 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 101 | 135.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 125 | 136.16 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 138 | 136.32 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 16 |
| 153 | 136.45 | temperature | 25.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 165 | 136.59 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 205 | 136.98 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 6 |
| 211 | 137.03 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 8 |
| 227 | 137.34 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 233 | 137.42 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 296 | 138.00 | temperature | 20.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 306 | 138.06 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 330 | 138.25 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 343 | 138.35 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 345 | 138.36 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 411 | 138.78 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 447 | 139.00 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 505 | 139.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 508 | 139.34 | temperature | 25.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 514 | 139.38 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 550 | 139.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 552 | 139.55 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 597 | 139.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 612 | 139.80 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 619 | 139.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 620 | 139.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 622 | 139.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 629 | 139.88 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 663 | 140.01 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 680 | 140.05 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 709 | 140.14 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 727 | 140.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 769 | 140.28 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 17 | 21 |
| 851 | 140.44 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 919 | 140.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 955 | 140.62 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 987 | 140.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |