BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0622200 Os03g0622200|AK108660
(378 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33280.1 | chr4:16047357-16049310 REVERSE LENGTH=338 113 1e-25
AT3G18990.1 | chr3:6549077-6551568 REVERSE LENGTH=342 90 2e-18
AT3G18960.1 | chr3:6542618-6543568 FORWARD LENGTH=210 62 7e-10
AT4G01580.1 | chr4:685791-686668 FORWARD LENGTH=191 61 8e-10
AT4G31680.1 | chr4:15340289-15342080 REVERSE LENGTH=463 53 3e-07
AT1G49475.1 | chr1:18312983-18313748 FORWARD LENGTH=191 52 4e-07
AT5G66980.1 | chr5:26741563-26742826 FORWARD LENGTH=335 52 8e-07
AT4G31640.1 | chr4:15328357-15329658 FORWARD LENGTH=353 51 9e-07
AT4G34400.1 | chr4:16445323-16447596 FORWARD LENGTH=398 50 3e-06
AT1G49480.1 | chr1:18314596-18315460 REVERSE LENGTH=227 49 4e-06
AT4G31690.1 | chr4:15343327-15345161 REVERSE LENGTH=462 49 5e-06
>AT4G33280.1 | chr4:16047357-16049310 REVERSE LENGTH=338
Length = 337
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 148/335 (44%), Gaps = 39/335 (11%)
Query: 8 KNCSVCKEWQEHCYWSHMADHSKHFLKHMVGDFTESMTVPARFANNFNGHISEEVNLRSP 67
+NC C +W+E YW+H + HF + ++ F + +P +F+ + + + V L+SP
Sbjct: 3 ENCEDCMKWEEELYWTHF--QTLHFTQLLLPGFHNRLVIPRKFSTHCKRKLPQIVTLKSP 60
Query: 68 SGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFD-PSGC 126
SG T+++GV D + + GW +FV + +EE D L+F++ GV S F+VL+FD + C
Sbjct: 61 SGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLLVFKFHGV-SEFEVLVFDGQTLC 119
Query: 127 EKASPHFVGSHGFGRAENSAGAEQGGRNGRRTPPIVDGDNGHRHHLEMTLHRNSCRSIPR 186
EK + +FV G AE + + G +D + L + ++ R
Sbjct: 120 EKPTSYFV--RKCGHAEKTKASHTGYEQEEHINSDIDTASA---QLPVISPTSTVRVSEG 174
Query: 187 ACKRSLFSDETEAKENDGEDE--DVVAAAEGGRYGEYYFSRHGRVAEYNLREEDREEISR 244
S F ND D+ DV + G +++ +S
Sbjct: 175 KYPLSGFKKMRRELSNDNLDQKADVEMISAGS---------------------NKKALSL 213
Query: 245 VPVPVQPGNPVFVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVVLERASRGGEWHV 304
+ P F+ + SHV S C + + ++ K + +EVV++ +W +
Sbjct: 214 AKRAISPDG--FLVFMKRSHVVSK--CFLTIPYKWCVKNMLITRQEVVMQVDQ--TKWEM 267
Query: 305 PF-VHRQNTRGFYGAGWRQFAGDNRLVAHDVCLFE 338
F + G GW++F DN L DVC+FE
Sbjct: 268 KFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFE 302
>AT3G18990.1 | chr3:6549077-6551568 REVERSE LENGTH=342
Length = 341
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 23/311 (7%)
Query: 44 MTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGD 103
+ VP +F + F +S V L P G W +G+ +D ++ Q GW+EFVD I G
Sbjct: 20 LRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKAD-NKIWFQDGWQEFVDRYSIRIGY 78
Query: 104 CLLFRYSGVSSSFDVLIFDPSGCE----------KASPHFVGSHGFGRAENSAGAEQGGR 153
L+FRY G +S+F V IF+ S E A HF + F E+ AE
Sbjct: 79 LLIFRYEG-NSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDE-DAEVIFP 136
Query: 154 NGRRTPPI----VDGDNGHRHHLEMTLHRNSCRSIPRACKRSLFSDETEAKEN-DGEDED 208
+ P+ V + G+ TL ++ + K+N D E+ +
Sbjct: 137 SSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEIN 196
Query: 209 VVAAAEGGRYGEYYFSRHGRVAEYNLREEDREEISRVPVPVQPGNPVFVQVIHSSHVRSS 268
A + F + + E+RE +P NP F V+ S++
Sbjct: 197 SSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRG 256
Query: 269 KYCIVGVSPEFAGKYLGAVEREVVLERASRGGEWHVPFVHRQNTRGFYGAGWRQFAGDNR 328
CI+ + FA KYL + + ++ A + +W V +++ R + GW +F +N
Sbjct: 257 --CIMYLPSGFAEKYLSGISGFIKVQLAEK--QWPVRCLYKAG-RAKFSQGWYEFTLENN 311
Query: 329 LVAHDVCLFEL 339
L DVC+FEL
Sbjct: 312 LGEGDVCVFEL 322
>AT3G18960.1 | chr3:6542618-6543568 FORWARD LENGTH=210
Length = 209
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 44 MTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGD 103
M +P RF +SE V L +P+G SI + E+ GW EF + + IEEG
Sbjct: 44 MKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRI-GEEIWFHEGWSEFAEAHSIEEGH 102
Query: 104 CLLFRYSGVSSSFDVLIFDPSGCEKASP 131
LLF Y +SSF V+IF+ S CE P
Sbjct: 103 FLLFEYKE-NSSFRVIIFNVSACETKYP 129
>AT4G01580.1 | chr4:685791-686668 FORWARD LENGTH=191
Length = 190
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 44 MTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGD 103
M +P RF +SE V L +P+G SI + E+ GW EF + + IEEG
Sbjct: 44 MRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRI-GEEIWFHEGWSEFAEAHSIEEGH 102
Query: 104 CLLFRYSGVSSSFDVLIFDPSGCEKASP 131
LLF Y +SSF V+IF+ S CE P
Sbjct: 103 FLLFEYKK-NSSFRVIIFNASACETNYP 129
>AT4G31680.1 | chr4:15340289-15342080 REVERSE LENGTH=463
Length = 462
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 15/118 (12%)
Query: 23 SHMADHSKHFLKHMVGDFTESMTVPARFANNFNGHIS-----EEVNLRS-PSGETWSIGV 76
S ++ +KHF K ++ F ++ +P +F F+ HI E V LR+ S TW + +
Sbjct: 5 SQLSPTNKHFFKPLLPGFQRNLNIPVKF---FSEHIEGKHEGETVKLRADASKRTWEVKM 61
Query: 77 ANSDAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEKASPHFV 134
+ L GWKEFV+ + + D ++FR+ G F V PS CE P +
Sbjct: 62 DGNR-----LTEGWKEFVEAHDLRIRDFVVFRHEG-DMVFHVTALGPSCCEIQYPQSI 113
>AT1G49475.1 | chr1:18312983-18313748 FORWARD LENGTH=191
Length = 190
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 30 KHFLKHMVGD--FTESMTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQ 87
K F+K ++ + M VPARF F +++ V L++P G SI + E+ +
Sbjct: 32 KKFIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRI-GDEVWFE 89
Query: 88 PGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEKASPHFVGSHGFGRAENSAG 147
GW EF + + + +G L F Y G S F V+IFD S E P + R E
Sbjct: 90 KGWSEFAEAHSLSDGHFLFFHYEG-DSCFRVVIFDVSASEIEYP--LDDTDDNREEVMDD 146
Query: 148 AEQG 151
EQG
Sbjct: 147 DEQG 150
>AT5G66980.1 | chr5:26741563-26742826 FORWARD LENGTH=335
Length = 334
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 25 MADHSK--HFLKHMVGDF-TESMTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDA 81
M D SK F K + +F + + +P F + + +E L G W + D
Sbjct: 1 MVDLSKDLQFFKVFLPEFGSHELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDT 60
Query: 82 GE---LVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEK 128
E + GW+ F + +E GD L+F Y G S F V IF GC+K
Sbjct: 61 EERFCVFFTKGWQSFANDQSLEFGDFLVFSYDG-DSRFSVTIFANDGCKK 109
>AT4G31640.1 | chr4:15328357-15329658 FORWARD LENGTH=353
Length = 352
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 18/138 (13%)
Query: 25 MADHSKHFLKHMVGDFTESMTVPARFANNFNGHIS-----EEVNLRS-PSGETWSIGVAN 78
A S HF + ++ F + +P +F F+ HI V LRS PS TW + +
Sbjct: 7 FAPKSPHFFQPILPGFKSHIKIPVKF---FSKHIEGKHEGNTVYLRSYPSRRTWKVKMEG 63
Query: 79 SDAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEKASPHFVGSHG 138
E GWKEFV+ + + GD ++F++ G F V PS CE + S
Sbjct: 64 HKLTE-----GWKEFVEAHDLRVGDFVVFKHKG-DMLFHVTAIGPSCCE---VQYAPSRS 114
Query: 139 FGRAENSAGAEQGGRNGR 156
R E S + RN +
Sbjct: 115 HDRNEESDEIGESSRNEK 132
>AT4G34400.1 | chr4:16445323-16447596 FORWARD LENGTH=398
Length = 397
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 32 FLKHMVGDFTESMTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWK 91
F+ H +F M +P + ++ + V LR P G +W + D E++ GW
Sbjct: 20 FVSHFSSEF---MVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKD-DEVLFSQGWP 75
Query: 92 EFVDGNGIEEGDCLLFRYSGVSSSFDVLIF 121
+FV N + +GD L F Y+G + F+V IF
Sbjct: 76 KFVRDNTLNDGDFLTFAYNG-AHIFEVSIF 104
>AT1G49480.1 | chr1:18314596-18315460 REVERSE LENGTH=227
Length = 226
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 200 KENDGEDEDVVAAAEGGRYGE----YYFSRHGRVAEYNLREEDREEISRVPVPVQPGNPV 255
K+ + E+V ++ GG E +Y S R + + E+RE +P NP
Sbjct: 71 KKKNPNPEEVNSSTPGGDDSENRSKFYESASAR--KRTVTAEERERAVNAAKTFEPTNPY 128
Query: 256 FVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVVLERASRGGEWHVPFVHRQNTRGF 315
F V+ S++ CI+ + FA KYL + + L+ + +W V +++ R
Sbjct: 129 FRVVLRPSYLYRG--CIMYLPSGFAEKYLSGISGFIKLQLGEK--QWPVRCLYKAG-RAK 183
Query: 316 YGAGWRQFAGDNRLVAHDVCLFEL 339
+ GW +F +N + DVC+FEL
Sbjct: 184 FSQGWYEFTLENNIGEGDVCVFEL 207
>AT4G31690.1 | chr4:15343327-15345161 REVERSE LENGTH=462
Length = 461
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 23 SHMADHSKHFLKHMVGDFTESMTVPAR-FANNFNG-HISEEVNLRSPSGE-TWSIGVANS 79
S ++ ++HF + ++ F ++ +P F+ + G H + V LR+ + E TW + +
Sbjct: 5 SPLSPTNQHFFQPLLPGFQSNLKIPVNYFSEHIEGKHEGKTVTLRTDASERTWEVKMEGH 64
Query: 80 DAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEKASPH 132
L GWKEFV+ + + GD ++FR+ G F V PS CE P
Sbjct: 65 R-----LTEGWKEFVEAHDLRIGDFVVFRHEG-DMVFHVTALGPSCCEIQYPQ 111
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,887,223
Number of extensions: 423734
Number of successful extensions: 1192
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 1209
Number of HSP's successfully gapped: 12
Length of query: 378
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 278
Effective length of database: 8,364,969
Effective search space: 2325461382
Effective search space used: 2325461382
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)