Os03g0620400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0620400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Transcriptional factor B3 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 183.44 | 0.636 | 4.63 | -3.02 | 0.434 | -0.418 | 0.345 | 5.71 | -0.00114 | 21.4 | 90.07 | 8153 | -- | -- |
| 223.85 | 0.697 | 4.67 | -2 | 0.404 | -0.446 | -0.0208 | -- | 0.0336 | 22 | 89 | 4709 | -- | -- |
| 183.85 | 0.632 | 4.63 | -3.02 | 0.435 | -0.412 | -- | 5.66 | 0.00322 | 21.4 | 90.1 | 8189 | -- | -- |
| 205.63 | 0.668 | 4.68 | -2.62 | 0.422 | -2.05 | -- | -- | 0.0496 | 21.3 | 97 | 10687 | -- | -- |
| 194.64 | 0.65 | 4.63 | -3.01 | -- | -0.522 | -- | 5.67 | -0.0154 | -- | 90.2 | 8125 | -- | -- |
| 227.78 | 0.708 | 4.64 | -2.08 | 0.442 | -- | -0.0621 | -- | 0.186 | 21.7 | -- | -- | -- | -- |
| 227.79 | 0.707 | 4.64 | -2.08 | 0.443 | -- | -- | -- | 0.186 | 21.6 | -- | -- | -- | -- |
| 212.8 | 0.679 | 4.66 | -2.66 | -- | -2.15 | -- | -- | 0.0405 | -- | 96 | 12111 | -- | -- |
| 327.78 | 0.843 | 4.56 | -- | 0.554 | 0.879 | -- | -- | 0.547 | 21.2 | 95 | 11702 | -- | -- |
| 239.4 | 0.723 | 4.63 | -2.08 | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
| 341.73 | 0.865 | 4.59 | -- | 0.44 | -- | -- | -- | 0.418 | 21.3 | -- | -- | -- | -- |
| 274.61 | 0.772 | 4.51 | -- | -- | 1.48 | -- | -- | 0.706 | -- | 95 | 47520 | -- | -- |
| 353.02 | 0.877 | 4.58 | -- | -- | -- | -- | -- | 0.416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 178.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 20 |
| 9 | 179.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 15 | 180.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 19 | 180.04 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 48 | 180.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 57 | 180.37 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 107 | 181.12 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 122 | 181.26 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 138 | 181.51 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 149 | 181.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 152 | 181.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 6 |
| 157 | 181.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 160 | 181.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 168 | 181.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 228 | 182.52 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 259 | 182.90 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 277 | 183.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 17 |
| 292 | 183.34 | humidity | 90.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 321 | 183.61 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 346 | 183.86 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 10 |
| 356 | 183.94 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 19 |
| 404 | 184.23 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 460 | 184.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 22 |
| 485 | 184.75 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 519 | 184.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 533 | 185.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 538 | 185.14 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 583 | 185.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 599 | 185.58 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 602 | 185.62 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 613 | 185.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 620 | 185.74 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 639 | 185.95 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 662 | 186.10 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 666 | 186.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 673 | 186.15 | humidity | 90.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 681 | 186.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 696 | 186.31 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 10 |
| 698 | 186.32 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 10 |
| 720 | 186.52 | wind | 9.0 | 14400 | < th | dose independent | rect. | 21 | 14 |
| 766 | 186.89 | humidity | 90.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 790 | 187.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 792 | 187.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 797 | 187.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 799 | 187.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 861 | 187.33 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 907 | 187.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 18 |
| 913 | 187.57 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 914 | 187.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 916 | 187.60 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 919 | 187.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 944 | 187.70 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 948 | 187.71 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 979 | 187.85 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 6 |