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Os08g0324300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Transcriptional factor B3 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.07 (0.0226) R2 : 0.426
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.03 (0.0587) R2dC : 0.389 R2C : 0.368
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.284 (0.0475) R2dN8 : 0.0581 R2N8 : 0.0375
σ : 0.425
deviance : 82.72
__
_____
C
peak time of C : 19
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.97 0.348 8.19 -0.271 1.02 -0.598 -0.159 6.58 0.252 19 29.7 4239 -- --
60 0.364 8.05 0.931 1.06 0.137 -0.159 -- 0.383 18.8 29.7 4239 -- --
55.03 0.346 8.19 -0.272 1.02 -0.6 -- 6.61 0.252 19 29.7 4238 -- --
58.25 0.355 8.02 1.05 1.01 0.24 -- -- 0.482 19.2 31.23 18748 -- --
108.29 0.485 8.19 -0.556 -- -0.694 -- 7.44 0.16 -- 29.5 4236 -- --
60.65 0.365 8.05 0.911 1.04 -- -0.165 -- 0.386 18.9 -- -- -- --
60.72 0.365 8.05 0.914 1.04 -- -- -- 0.386 18.9 -- -- -- --
114.2 0.498 7.99 1.03 -- 0.33 -- -- 0.521 -- 31.52 18761 -- --
69.28 0.388 8.08 -- 1.01 -0.486 -- -- 0.223 19 34.6 47520 -- --
117.43 0.506 8.03 0.892 -- -- -- -- 0.366 -- -- -- -- --
82.72 0.425 8.07 -- 1.03 -- -- -- 0.284 19 -- -- -- --
124.26 0.519 8.05 -- -- -0.507 -- -- 0.278 -- 35.01 47520 -- --
138.41 0.549 8.05 -- -- -- -- -- 0.267 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.35 humidity 8e+01 4320 > th dose independent rect. 9 1
2 53.37 humidity 8e+01 4320 > th dose independent rect. 8 3
3 53.38 humidity 8e+01 4320 < th dose independent rect. 9 1
4 53.45 wind 5e+00 4320 < th dose independent rect. 14 1
6 53.55 wind 5e+00 4320 > th dose independent rect. 14 1
7 53.71 humidity 8e+01 4320 > th dose dependent rect. 8 1
8 53.71 radiation 1e+00 720 < th dose dependent rect. 14 7
9 53.71 radiation 1e+00 720 < th dose dependent rect. 14 15
12 53.74 radiation 1e+00 720 < th dose independent rect. 14 7
16 53.78 humidity 8e+01 4320 < th dose independent rect. 8 3
17 53.80 wind 3e+00 4320 > th dose dependent rect. 14 1
23 53.91 wind 1e+00 43200 < th dose dependent rect. 3 5
27 53.94 wind 1e+00 43200 < th dose dependent rect. 2 7
37 54.05 radiation 1e+00 720 > th dose independent rect. 13 5
41 54.14 wind 1e+00 43200 > th dose independent rect. 3 5
43 54.15 radiation 1e+00 720 > th dose independent rect. 13 16
47 54.18 wind 1e+00 43200 < th dose independent rect. 3 5
66 54.22 wind 1e+00 43200 < th dose independent rect. 2 7
69 54.22 radiation 2e+01 90 < th dose dependent rect. 7 8
71 54.22 radiation 4e+01 90 < th dose dependent rect. 7 12
76 54.26 radiation 1e+00 720 < th dose independent rect. 14 15
87 54.30 wind 1e+00 43200 > th dose independent rect. 1 7
90 54.31 wind 7e+00 4320 < th dose dependent rect. 14 1
130 54.48 radiation 4e+01 270 < th dose independent rect. 6 11
133 54.49 radiation 4e+01 270 < th dose dependent rect. 5 10
135 54.52 radiation 4e+01 90 < th dose dependent rect. 20 23
142 54.55 temperature 3e+01 4320 < th dose independent rect. 13 2
149 54.57 radiation 4e+01 90 < th dose dependent rect. 6 23
150 54.58 radiation 1e+00 720 < th dose dependent sin 17 NA
156 54.59 atmosphere 1e+03 720 > th dose independent rect. 7 1
157 54.59 wind 1e+00 43200 < th dose dependent rect. 2 11
159 54.60 atmosphere 1e+03 30 > th dose independent rect. 6 13
180 54.68 temperature 3e+01 4320 > th dose independent rect. 13 2
191 54.72 radiation 1e+00 720 < th dose independent sin 17 NA
198 54.74 radiation 2e+01 90 < th dose independent rect. 7 12
206 54.76 humidity 6e+01 14400 < th dose independent rect. 10 4
207 54.76 temperature 3e+01 4320 < th dose independent rect. 11 5
213 54.78 temperature 3e+01 4320 < th dose independent rect. 24 16
230 54.79 temperature 3e+01 4320 < th dose independent rect. 4 12
249 54.81 humidity 7e+01 14400 > th dose independent rect. 19 15
265 54.85 humidity 7e+01 14400 < th dose independent rect. 19 15
290 54.88 radiation 4e+01 720 < th dose dependent rect. 7 1
299 54.89 temperature 3e+01 90 > th dose dependent rect. 10 6
306 54.90 wind 3e+00 43200 < th dose dependent rect. 5 1
311 54.91 temperature 3e+01 4320 > th dose independent rect. 11 5
377 54.98 wind 1e+00 43200 < th dose independent rect. 2 11
380 54.98 temperature 3e+01 270 > th dose dependent rect. 11 2
381 54.98 radiation 1e+01 4320 < th dose dependent rect. 7 2
401 55.01 radiation 1e+00 720 > th dose independent sin 18 NA
411 55.02 radiation 3e+01 10 < th dose dependent rect. 7 20
415 55.03 radiation 2e+01 270 < th dose independent rect. 5 10
418 55.03 precipitation 1e-01 14400 > th dose dependent rect. 4 2
441 55.04 radiation 2e+01 90 < th dose independent rect. 6 23
443 55.04 radiation 1e+01 90 > th dose dependent rect. 10 23
445 55.05 precipitation 1e-01 14400 > th dose independent rect. 4 2
478 55.07 radiation 1e+01 270 > th dose dependent rect. 6 8
516 55.09 atmosphere 1e+03 720 > th dose independent rect. 20 14
518 55.09 radiation 1e+01 90 > th dose dependent sin 20 NA
523 55.10 temperature 3e+01 270 > th dose independent rect. 11 2
540 55.11 humidity 8e+01 14400 < th dose dependent rect. 19 16
583 55.14 atmosphere 1e+03 720 > th dose independent rect. 22 10
586 55.14 radiation 1e+00 720 < th dose dependent rect. 16 1
588 55.14 precipitation 1e-01 14400 > th dose dependent rect. 4 10
595 55.15 humidity 7e+01 4320 > th dose independent rect. 19 18
599 55.16 precipitation 1e-01 14400 < th dose independent rect. 4 2
605 55.16 precipitation 1e-01 14400 < th dose dependent rect. 4 2
612 55.17 humidity 7e+01 4320 > th dose independent rect. 2 11
615 55.17 atmosphere 1e+03 10 < th dose independent rect. 4 13
617 55.17 atmosphere 1e+03 720 > th dose independent rect. 22 18
654 55.19 radiation 1e+01 4320 < th dose independent rect. 8 1
658 55.19 radiation 2e+01 90 < th dose independent rect. 7 8
689 55.20 radiation 1e+01 270 > th dose dependent rect. 9 5
697 55.21 radiation 2e+01 90 < th dose independent rect. 7 20
698 55.21 humidity 7e+01 14400 < th dose dependent rect. 10 1
720 55.23 temperature 3e+01 4320 < th dose independent sin 1 NA
736 55.24 humidity 7e+01 14400 > th dose independent rect. 3 7
749 55.24 radiation 4e+01 720 < th dose dependent rect. 6 4
764 55.25 temperature 3e+01 14400 > th dose dependent rect. 8 1
783 55.26 radiation 1e+00 720 < th dose independent rect. 16 1
786 55.26 temperature 3e+01 4320 < th dose independent rect. 13 22
816 55.28 radiation 4e+01 720 < th dose dependent rect. 22 10
838 55.30 temperature 3e+01 10 > th dose independent rect. 12 4
888 55.31 humidity 9e+01 4320 < th dose dependent rect. 6 5
910 55.32 radiation 2e+01 90 < th dose independent rect. 20 23
984 55.35 temperature 3e+01 4320 < th dose independent rect. 11 22