BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0416500 Os03g0416500|AK103024
(296 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0416500 6-phosphogluconolactonase domain containing pr... 612 e-175
Os07g0604000 Similar to 6-phosphogluconolactonase-like protein 361 e-100
Os09g0529100 6-phosphogluconolactonase domain containing pr... 264 5e-71
Os08g0547100 6-phosphogluconolactonase domain containing pr... 253 9e-68
>Os03g0416500 6-phosphogluconolactonase domain containing protein
Length = 296
Score = 612 bits (1577), Expect = e-175, Method: Compositional matrix adjust.
Identities = 296/296 (100%), Positives = 296/296 (100%)
Query: 1 MLSWNNSWHSSSTENRTMEREIVASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIK 60
MLSWNNSWHSSSTENRTMEREIVASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIK
Sbjct: 1 MLSWNNSWHSSSTENRTMEREIVASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIK 60
Query: 61 ERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKED 120
ERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKED
Sbjct: 61 ERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKED 120
Query: 121 FLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIG 180
FLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIG
Sbjct: 121 FLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIG 180
Query: 181 SDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAK 240
SDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAK
Sbjct: 181 SDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAK 240
Query: 241 AVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFLEAKTKNDGYEHPKY 296
AVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFLEAKTKNDGYEHPKY
Sbjct: 241 AVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFLEAKTKNDGYEHPKY 296
>Os07g0604000 Similar to 6-phosphogluconolactonase-like protein
Length = 212
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/212 (80%), Positives = 194/212 (91%), Gaps = 1/212 (0%)
Query: 86 YNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAA 145
YNKTLDWSKWYIFW+DERAVAKNH +S Y+ TKE FLSKVPILNGHVYSINDN TVEDAA
Sbjct: 1 YNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAA 60
Query: 146 TDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYI 205
TDYEFVIRQLVK+RT+GVSESNDCPKFDLILLS+GSDGHVASLFPNHP+LELKDDW+TYI
Sbjct: 61 TDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYI 120
Query: 206 TDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAP-SIPARMVQ 264
TDSP PPPERITFTLPVINSASNIA+V TG+DK++AV+ AISD +GP+AP S+PARMVQ
Sbjct: 121 TDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQ 180
Query: 265 PTDGKLVWFLDKASASFLEAKTKNDGYEHPKY 296
PTDGKLVWFLDK++AS L+A+ + +H +Y
Sbjct: 181 PTDGKLVWFLDKSAASSLDAENDDAFEQHREY 212
>Os09g0529100 6-phosphogluconolactonase domain containing protein
Length = 269
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 128/257 (49%), Positives = 170/257 (66%), Gaps = 2/257 (0%)
Query: 29 KKNNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNK 88
KK E+ +F++ +++A LA+Y +++S ERG F + LSGG LI +RKL E PY
Sbjct: 15 KKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLD 74
Query: 89 TLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDY 148
++DWSKW++FW DER V K+H DS YK + FLSKVPI G VY+IND ++ E AA DY
Sbjct: 75 SVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDY 134
Query: 149 EFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDS 208
E ++QLVK + +S+S P+FD++LL +G DGH+ASLFP HP + WVTYI DS
Sbjct: 135 ETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDS 194
Query: 209 PVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDG 268
P PPPERITFT PVINS++ +A+V TG KA AV A+SD D +P M DG
Sbjct: 195 PKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDL--LPVEMAVLQDG 252
Query: 269 KLVWFLDKASASFLEAK 285
+ WF DK + S L+ K
Sbjct: 253 EFTWFTDKPAVSMLQNK 269
>Os08g0547100 6-phosphogluconolactonase domain containing protein
Length = 327
Score = 253 bits (647), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 167/254 (65%), Gaps = 2/254 (0%)
Query: 31 NNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTL 90
++ +F++ + +A LA+Y +++S ++ ERG F +ALSGG LI +RKL E+PY + +
Sbjct: 75 RKKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAV 134
Query: 91 DWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEF 150
+WSKW++FW DER V K+H DS YK + LSKVPI +Y+IND ++ E AA +YE
Sbjct: 135 EWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYET 194
Query: 151 VIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPV 210
++QLV V +SE PK DL+LL +G DGHVASLFP HP + WV+YI DSP
Sbjct: 195 CLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPK 254
Query: 211 PPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDGKL 270
PPPERITFT P++NS+++IA+V TG KA AV+ A SD D +P MV +G L
Sbjct: 255 PPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDL--LPVEMVSQQEGVL 312
Query: 271 VWFLDKASASFLEA 284
WF DK + S L +
Sbjct: 313 TWFTDKPAVSMLSS 326
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,575,769
Number of extensions: 434056
Number of successful extensions: 822
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 819
Number of HSP's successfully gapped: 4
Length of query: 296
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 196
Effective length of database: 11,814,401
Effective search space: 2315622596
Effective search space used: 2315622596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 156 (64.7 bits)