BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0399900 Os03g0399900|AK099576
(127 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0399900 Similar to GOS9 protein 174 1e-44
Os03g0399800 Jacalin-related lectin domain containing protein 94 3e-20
Os12g0198700 Similar to Jasmonate-induced protein 79 1e-15
Os12g0247700 Similar to Jasmonate-induced protein 73 6e-14
Os11g0524900 73 6e-14
Os04g0369100 Protein kinase-like domain containing protein 72 1e-13
Os11g0608700 69 6e-13
Os11g0607900 Similar to Beta-glucosidase aggregating factor 68 2e-12
Os11g0524400 67 3e-12
Os06g0170200 GOS9 protein 63 5e-11
Os11g0608600 63 6e-11
>Os03g0399900 Similar to GOS9 protein
Length = 127
Score = 174 bits (441), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 91/106 (85%)
Query: 22 LLLPRQGQEXXXXXXXXXXXXXXXVDHHVRAIGVREGGARLVGPIGDYTHVVTSLKLVTS 81
LLLPRQGQE VDHHVRAIGVREGGARLVGPIGDYTHVVTSLKLVTS
Sbjct: 22 LLLPRQGQEPPHHRPLGRPRRPLRVDHHVRAIGVREGGARLVGPIGDYTHVVTSLKLVTS 81
Query: 82 QRTIGPFGNGAGTPFAVPVLNNGSVVGFFARAGPYLESIGIYVHPF 127
QRTIGPFGNGAGTPFAVPVLNNGSVVGFFARAGPYLESIGIYVHPF
Sbjct: 82 QRTIGPFGNGAGTPFAVPVLNNGSVVGFFARAGPYLESIGIYVHPF 127
>Os03g0399800 Jacalin-related lectin domain containing protein
Length = 199
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 63 VGPIGDYTHVVTSLKLVTSQRTIGPFGNGAGTPFAVPVLNNGSVVGFFARAGPYLESIGI 122
VGP GD +VTSLKLVT +RTIGPFG GAGTPF+VPV +G VVGFF RAG YLE+IG+
Sbjct: 130 VGPFGDRDSLVTSLKLVTDRRTIGPFGYGAGTPFSVPVRGDGGVVGFFVRAGAYLEAIGV 189
Query: 123 YVHP 126
YV+P
Sbjct: 190 YVNP 193
>Os12g0198700 Similar to Jasmonate-induced protein
Length = 307
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 53 IGVREGGARLVGPIGDYT--HVVTSLKLVTSQRTIGPFGNGAGTPFAVPVLNNGSVVGFF 110
G E + G G Y V+ S+K VT+++T GPFG GTPF+VPV NN ++VGFF
Sbjct: 231 FGSSEFLKEVSGTFGPYEGWKVIRSIKFVTNKKTYGPFGRQEGTPFSVPVQNNSTIVGFF 290
Query: 111 ARAGPYLESIGIYVHP 126
R+G YL+++GIYVHP
Sbjct: 291 GRSGKYLDTVGIYVHP 306
>Os12g0247700 Similar to Jasmonate-induced protein
Length = 306
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 54 GVREGGARLVGPIGDY--THVVTSLKLVTSQRTIGPFGNGAGTPFAVPVLNNGSVVGFFA 111
G E + G G Y + V+TS+ +T+++T GPFG GTPF+VP NN S+VGFF
Sbjct: 231 GSSEFLKEVSGTFGPYEGSTVITSINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFG 290
Query: 112 RAGPYLESIGIYVHP 126
R+G Y+ ++G+YV P
Sbjct: 291 RSGKYINAVGVYVQP 305
>Os11g0524900
Length = 1386
Score = 72.8 bits (177), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 16/96 (16%)
Query: 47 DHHVRAIGVREGGA-------------RLVGPIGDY---THVVTSLKLVTSQRTIGPFGN 90
DHH+ + GG+ R+ G IG Y + VVTS+ LVT+ GPFG
Sbjct: 1134 DHHLAGLWGSHGGSNQTIQFGPSEFITRVYGTIGSYNTPSDVVTSITLVTNAGCYGPFGQ 1193
Query: 91 GAGTPFAVPVLNNGSVVGFFARAGPYLESIGIYVHP 126
G PF PV NGS+VGFF A Y+++IG+YV P
Sbjct: 1194 ENGIPFDFPVQGNGSIVGFFGHANLYVDAIGVYVTP 1229
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 64 GPIGDYTHVVTSLKLVT-SQRTIGPFGNGAGTPFAVPVLNNGSVVGFFARAGPYLESIGI 122
GP G++ +V+TSL VT + GPFG G GTPF P+ NGS+VGFF R G +E++G
Sbjct: 1322 GPFGEFPNVITSLTFVTNTHHQYGPFGQGGGTPFHAPMSGNGSIVGFFGREGLCIEAVGF 1381
Query: 123 Y 123
Y
Sbjct: 1382 Y 1382
Score = 68.9 bits (167), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 64 GPIGDYTHVVTSLKLVTSQRTIGPFGNGAGTPFAVPVLNNGSVVGFFARAGPYLESIGIY 123
G + +++TSL VT+ ++ GPFG GTPF +PV G +VGFF RAG ++IGIY
Sbjct: 1012 GRFAGFQNIITSLTFVTNTQSYGPFGQREGTPFHIPVQCGGRIVGFFGRAGWCFDAIGIY 1071
Query: 124 VHP 126
V+P
Sbjct: 1072 VNP 1074
>Os04g0369100 Protein kinase-like domain containing protein
Length = 770
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Query: 53 IGVREGGARLVGPIGDYTH----VVTSLKLVTSQRTIGPFGNGAGTPFAVPVLNNGSVVG 108
+G+ E + G IG + V+TSL +T++ + GPFG GTPF +PV +NGS+VG
Sbjct: 368 LGLIEYVTEVSGTIGPFDRAPAGVITSLTFITNKGSYGPFGEVRGTPFHIPVQDNGSIVG 427
Query: 109 FFARAGPYLESIGIYVHP 126
FFARAG Y+++ GIYV+P
Sbjct: 428 FFARAGWYVDAFGIYVNP 445
>Os11g0608700
Length = 837
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 49 HVRAIGVREGGARLVGPIGDYT---HVVTSLKLVTSQRTIGPFGNGAGTPFAVPVLNNGS 105
H G E R+ G IG + VVTS+ VT+ R+ GPFG G GTPF VP+ +NG
Sbjct: 756 HTVKFGSSEFLVRVFGTIGPFRASRCVVTSVTFVTNVRSYGPFGQGGGTPFDVPMQSNGK 815
Query: 106 VVGFFARAGPYLESIGIYVHPF 127
+VGFF A Y+E++G+YV +
Sbjct: 816 IVGFFGHARSYVEALGVYVRTY 837
>Os11g0607900 Similar to Beta-glucosidase aggregating factor
Length = 107
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 69 YTHVVTSLKLVTSQRTIGPFGNGAGTPFAVPVLNNGSVVGFFARAGPYLESIGIYVHP 126
Y ++TSL LVT+ RT GP+G GTPF +P+ GS+VGFF R G Y+++ GIYV+P
Sbjct: 38 YGVIITSLTLVTNTRTYGPYGQVGGTPFQIPIQIKGSIVGFFGRVGWYVDAFGIYVNP 95
>Os11g0524400
Length = 1791
Score = 67.4 bits (163), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 49 HVRAIGVREGGARLVGPIGDYT---HVVTSLKLVTSQRTIGPFGNGAGTPFAVPVLNNGS 105
H+ +G E + G G + ++TSL VT+ ++ GP+G GTPF + V + G
Sbjct: 1440 HMIQLGPSEFLVEVSGTFGRFRAALDIITSLTFVTNAQSYGPYGQREGTPFHISVQSRGC 1499
Query: 106 VVGFFARAGPYLESIGIYVHP 126
+VGFF RAG Y+++IGIYV P
Sbjct: 1500 IVGFFGRAGWYVDAIGIYVKP 1520
>Os06g0170200 GOS9 protein
Length = 139
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Query: 64 GPIGDYTHVVTSLKLVTSQRTIGPFGNGAGTPFAVPVLNNGSVVGFFARAGPYLESIGIY 123
G G +T+VVT+LK+VT+ T FG G GT F++P L +GSVVGFF RAG ++SIG+Y
Sbjct: 79 GISGTFTNVVTNLKIVTNVTTYN-FGQGGGTAFSLP-LQSGSVVGFFGRAGALVDSIGVY 136
Query: 124 VH 125
VH
Sbjct: 137 VH 138
>Os11g0608600
Length = 151
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 63 VGPIGDYTHVVTSLKLVTSQRTIGPFGNGAGTPFAV-PVLNNGSVVGFFARAGPYLESIG 121
VGP +V+TSLK T+ T GPFG G GTPF V P+ + ++VGFF RA LE+ G
Sbjct: 86 VGPFNSMPNVITSLKFFTNGGTYGPFGQGGGTPFKVDPLEYSSNIVGFFGRAEQCLETFG 145
Query: 122 IYVHPF 127
IY+ F
Sbjct: 146 IYIRKF 151
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.145 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,415,784
Number of extensions: 129533
Number of successful extensions: 281
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 284
Number of HSP's successfully gapped: 19
Length of query: 127
Length of database: 17,035,801
Length adjustment: 89
Effective length of query: 38
Effective length of database: 12,388,755
Effective search space: 470772690
Effective search space used: 470772690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 150 (62.4 bits)