Os03g0399800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Jacalin-related lectin domain containing protein.
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Os03g0399800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Jacalin-related lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 819.57 | 1.35 | 11.9 | -5.02 | 2.91 | -4.36 | 5.97 | -3.79 | -1.17 | 9.47 | 72 | 1194 | -- | -- |
| 846.57 | 1.36 | 11.9 | -5.55 | 2.91 | -4.51 | 5.22 | -- | -1.31 | 9.42 | 72.99 | 1195 | -- | -- |
| 939.16 | 1.43 | 11.9 | -4.87 | 2.66 | -4.22 | -- | -2.78 | -1.21 | 9.31 | 73 | 1230 | -- | -- |
| 948.82 | 1.43 | 11.9 | -5.35 | 2.86 | -4.44 | -- | -- | -1.31 | 9.42 | 72.98 | 1196 | -- | -- |
| 1209.01 | 1.62 | 11.9 | -4.61 | -- | -4.18 | -- | -3.77 | -1.16 | -- | 75 | 1421 | -- | -- |
| 1515.92 | 1.83 | 11.8 | -4.65 | 2.22 | -- | 4.93 | -- | -0.755 | 8.18 | -- | -- | -- | -- |
| 1588.65 | 1.87 | 11.8 | -4.52 | 2.23 | -- | -- | -- | -0.762 | 7.91 | -- | -- | -- | -- |
| 1244.64 | 1.64 | 12 | -4.99 | -- | -4.21 | -- | -- | -1.32 | -- | 74.92 | 1403 | -- | -- |
| 1629.02 | 1.88 | 11.7 | -- | 3.52 | -5.45 | -- | -- | -0.588 | 8.89 | 77.66 | 2350 | -- | -- |
| 1859.38 | 2.01 | 11.9 | -4.49 | -- | -- | -- | -- | -0.732 | -- | -- | -- | -- | -- |
| 2126.35 | 2.16 | 11.7 | -- | 2.2 | -- | -- | -- | -0.258 | 8.06 | -- | -- | -- | -- |
| 1853.45 | 2.01 | 11.9 | -- | -- | -5.76 | -- | -- | -1.06 | -- | 86 | 1448 | -- | -- |
| 2391.82 | 2.28 | 11.8 | -- | -- | -- | -- | -- | -0.233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 862.65 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 3 | 874.54 | humidity | 60 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 4 | 874.92 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 7 | 876.04 | humidity | 60 | 720 | > th | dose dependent | sin | 19 | NA |
| 12 | 877.88 | humidity | 60 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 38 | 887.09 | humidity | 60 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 53 | 889.18 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 59 | 890.73 | humidity | 60 | 1440 | > th | dose dependent | sin | 0 | NA |
| 72 | 892.24 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 90 | 893.88 | humidity | 70 | 1440 | > th | dose dependent | rect. | 7 | 8 |
| 95 | 894.12 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 126 | 895.97 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 20 |
| 171 | 899.15 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 17 |
| 198 | 900.23 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 235 | 901.39 | humidity | 50 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 293 | 903.59 | humidity | 90 | 1440 | < th | dose dependent | sin | 1 | NA |
| 310 | 904.23 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 328 | 904.78 | humidity | 60 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 342 | 905.39 | humidity | 90 | 720 | < th | dose dependent | sin | 17 | NA |
| 359 | 906.01 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 402 | 907.47 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 403 | 907.50 | humidity | 90 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 426 | 908.39 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 504 | 910.97 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 9 |
| 547 | 912.30 | humidity | 50 | 720 | > th | dose dependent | no | NA | NA |
| 611 | 914.56 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 756 | 919.85 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 845 | 922.33 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 966 | 926.25 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 967 | 926.27 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 971 | 926.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 997 | 926.81 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 8 |