Os03g0399900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GOS9 protein.
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Os03g0399900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to GOS9 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1042.76 | 1.52 | 9.41 | -6.45 | 2.37 | -5.57 | 4.58 | -5.55 | -0.773 | 9.28 | 73.68 | 1231 | -- | -- |
| 1099.49 | 1.54 | 9.51 | -7.08 | 2.54 | -5.61 | 3.63 | -- | -0.89 | 8.86 | 73 | 1225 | -- | -- |
| 1111.45 | 1.55 | 9.43 | -6.4 | 2.18 | -5.46 | -- | -4.56 | -0.803 | 9.02 | 73.84 | 1258 | -- | -- |
| 1144.59 | 1.58 | 9.5 | -7.13 | 2.32 | -5.66 | -- | -- | -0.98 | 9.03 | 72 | 1238 | -- | -- |
| 1294.91 | 1.68 | 9.47 | -6.33 | -- | -5.11 | -- | -4.61 | -0.732 | -- | 72.62 | 1374 | -- | -- |
| 2200.55 | 2.2 | 9.35 | -6.12 | 1.93 | -- | 3.29 | -- | -0.235 | 7.11 | -- | -- | -- | -- |
| 2228.07 | 2.21 | 9.35 | -6.06 | 1.94 | -- | -- | -- | -0.245 | 6.84 | -- | -- | -- | -- |
| 1347.12 | 1.71 | 9.47 | -6.79 | -- | -5.22 | -- | -- | -0.706 | -- | 72 | 1351 | -- | -- |
| 2411.1 | 2.29 | 9.32 | -- | 1.99 | -5.09 | -- | -- | -0.137 | 8.9 | 75 | 1275 | -- | -- |
| 2426.13 | 2.3 | 9.39 | -6.02 | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
| 3195.84 | 2.64 | 9.2 | -- | 1.88 | -- | -- | -- | 0.43 | 7.04 | -- | -- | -- | -- |
| 2441.14 | 2.3 | 9.34 | -- | -- | -8.51 | -- | -- | -0.03 | -- | 82.14 | 1428 | -- | -- |
| 3381.24 | 2.71 | 9.24 | -- | -- | -- | -- | -- | 0.46 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1099.42 | humidity | 60 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 43 | 1121.93 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 56 | 1125.34 | humidity | 60 | 1440 | > th | dose dependent | sin | 23 | NA |
| 88 | 1132.75 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 100 | 1134.87 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 17 |
| 113 | 1136.10 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 178 | 1143.96 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 197 | 1145.30 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 201 | 1145.52 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 254 | 1150.80 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 258 | 1151.48 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 269 | 1152.82 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 270 | 1152.93 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 299 | 1155.54 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 308 | 1156.65 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 309 | 1156.74 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 316 | 1156.85 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 389 | 1159.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 401 | 1160.04 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 414 | 1160.14 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 461 | 1162.25 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 478 | 1163.33 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 492 | 1165.44 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 552 | 1171.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 567 | 1172.52 | humidity | 90 | 1440 | < th | dose dependent | sin | 22 | NA |
| 608 | 1176.51 | humidity | 70 | 1440 | > th | dose independent | sin | 22 | NA |
| 707 | 1184.62 | humidity | 70 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 761 | 1189.59 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 914 | 1199.78 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |