BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0370200 Os03g0370200|J033044F03
         (180 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0370200  Protein of unknown function DUF537 family protein   287   2e-78
Os07g0637200  Protein of unknown function DUF537 family protein   160   4e-40
Os11g0167300  Protein of unknown function DUF537 family protein    94   4e-20
Os08g0230500  Protein of unknown function DUF537 family protein    81   4e-16

>Os03g0370200 Protein of unknown function DUF537 family protein
          Length = 180

 Score =  287 bits (735), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/180 (83%), Positives = 150/180 (83%)

Query: 1   MGDRAAAAAEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXX 60
           MGDRAAAAAEAKTSVWWDIDRCGVPPCCRDPHR                  SIFAYGD  
Sbjct: 1   MGDRAAAAAEAKTSVWWDIDRCGVPPCCRDPHRVAHGVIAALAAAGCAGPVSIFAYGDAA 60

Query: 61  XXXXXXXXXXSSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSD 120
                     SSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSD
Sbjct: 61  RVAPPVLAALSSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSD 120

Query: 121 LLHRLRMKRYGILLAQPSNVSSRVLAAAARTEALVVSKIRVLFRHRHQVLNHWRSISQVC 180
           LLHRLRMKRYGILLAQPSNVSSRVLAAAARTEALVVSKIRVLFRHRHQVLNHWRSISQVC
Sbjct: 121 LLHRLRMKRYGILLAQPSNVSSRVLAAAARTEALVVSKIRVLFRHRHQVLNHWRSISQVC 180



>Os07g0637200 Protein of unknown function DUF537 family protein
          Length = 652

 Score =  160 bits (406), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 83/143 (58%), Positives = 92/143 (64%), Gaps = 1/143 (0%)

Query: 6   AAAAEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXXXXXXX 65
           A  A AKTSVWWDI+ C VP  C DP+                   SI AYGD       
Sbjct: 2   AEYATAKTSVWWDIENCQVPRAC-DPNLIAQNMSSALAAAGYTGPVSISAYGDIGRIGNA 60

Query: 66  XXXXXSSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSDLLHRL 125
                SSTGISLNHVPAG KD +DKK+LVDMLFWA DNPPP NYLLISGD+DFS+ LH+L
Sbjct: 61  VTHALSSTGISLNHVPAGIKDASDKKILVDMLFWAIDNPPPANYLLISGDRDFSNALHKL 120

Query: 126 RMKRYGILLAQPSNVSSRVLAAA 148
            M+RY ILLAQP NVS  + AAA
Sbjct: 121 TMRRYNILLAQPPNVSQALTAAA 143



>Os11g0167300 Protein of unknown function DUF537 family protein
          Length = 925

 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 1/149 (0%)

Query: 1   MGDRAAAAAEAKTSVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIFAYGDXX 60
            G+    +   K SVWWD   C +P    +P R                   I A GD  
Sbjct: 47  QGEGEGRSRAVKVSVWWDFQSCHLPQGA-NPCRVATRVTAALRDAGIRGPVDITALGDAY 105

Query: 61  XXXXXXXXXXSSTGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSD 120
                     ++TG++ +HVP+  K G D+  + D+ +W   NPPP ++ LISG++  ++
Sbjct: 106 MLPRAVQEALAATGVAFSHVPSSGKGGPDQLFMADLTYWIAQNPPPAHFFLISGNKGLAN 165

Query: 121 LLHRLRMKRYGILLAQPSNVSSRVLAAAA 149
           +LHRLRM  Y +LLA PS  SS + +AA 
Sbjct: 166 ILHRLRMSNYNVLLACPSADSSVLCSAAT 194



>Os08g0230500 Protein of unknown function DUF537 family protein
          Length = 530

 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 2/138 (1%)

Query: 14  SVWWDIDRCGVPPCCRDPHRXXXXXXXXXXXXXXXXXXSIF-AYGDXXXXXXXXXXXXSS 72
           +++WDI+ C VP   R                      ++  AYGD              
Sbjct: 53  AIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAFPRRLREGCQR 112

Query: 73  TGISLNHVPAGAKDGTDKKMLVDMLFWAFDNPPPGNYLLISGDQDFSDLLHRLRMKRYGI 132
           TG+ L  VP G KD  DK +LVDM  +A DN PP + +LISGD DF+  LH L  + Y I
Sbjct: 113 TGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAPALHILGQRGYTI 172

Query: 133 LLAQPSNVS-SRVLAAAA 149
           +LA PS+V+ S  L++A 
Sbjct: 173 VLAIPSSVTVSSALSSAG 190



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.324    0.136    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,905,721
Number of extensions: 197570
Number of successful extensions: 616
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 612
Number of HSP's successfully gapped: 4
Length of query: 180
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 86
Effective length of database: 12,127,685
Effective search space: 1042980910
Effective search space used: 1042980910
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 153 (63.5 bits)