BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0318500 Os03g0318500|AK121967
(629 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0318500 Similar to Glucose-6-phosphate 1-dehydrogenase... 1198 0.0
Os07g0406300 Similar to Glucose-6-phosphate 1-dehydrogenase... 559 e-159
Os03g0412800 Similar to Glucose-6-phosphate dehydrogenase p... 555 e-158
Os04g0485300 Glucose-6-phosphate dehydrogenase 383 e-106
Os02g0600400 Similar to Glucose-6-phosphate dehydrogenase 375 e-104
>Os03g0318500 Similar to Glucose-6-phosphate 1-dehydrogenase, chloroplast
precursor (EC 1.1.1.49) (G6PD)
Length = 629
Score = 1198 bits (3099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/629 (92%), Positives = 584/629 (92%)
Query: 1 MAGLAVXXXXXXXXXXXXXXXXXXXXGPCAQVAGPAANFRTRVCGLRCLIXXXXXXXXXX 60
MAGLAV GPCAQVAGPAANFRTRVCGLRCLI
Sbjct: 1 MAGLAVSASPAPAPASFRPAAAASRFGPCAQVAGPAANFRTRVCGLRCLIAAKLKFRKAL 60
Query: 61 XXHGWQLRRNLEVRANDKVPDWLEATPLTENIMSRDVQLAYDSGGETSNTCPDTLDSSVI 120
HGWQLRRNLEVRANDKVPDWLEATPLTENIMSRDVQLAYDSGGETSNTCPDTLDSSVI
Sbjct: 61 KRHGWQLRRNLEVRANDKVPDWLEATPLTENIMSRDVQLAYDSGGETSNTCPDTLDSSVI 120
Query: 121 EQSSMHHKLNPSETHPPVLKEDPVLFDDPPESAAPLCIAVIGATGELAKNKVFPALFALY 180
EQSSMHHKLNPSETHPPVLKEDPVLFDDPPESAAPLCIAVIGATGELAKNKVFPALFALY
Sbjct: 121 EQSSMHHKLNPSETHPPVLKEDPVLFDDPPESAAPLCIAVIGATGELAKNKVFPALFALY 180
Query: 181 YSGFLPQNVGIFGYSRKTLTDEDLRSMIEANLTCRVDHHENCDEKLNEFLKRTYYIDAGY 240
YSGFLPQNVGIFGYSRKTLTDEDLRSMIEANLTCRVDHHENCDEKLNEFLKRTYYIDAGY
Sbjct: 181 YSGFLPQNVGIFGYSRKTLTDEDLRSMIEANLTCRVDHHENCDEKLNEFLKRTYYIDAGY 240
Query: 241 DNKDGMVKLNSKMSQIEGNCAANRIFYLAVPQEXXXXXXXXXXXXXQTMQGWNRIIIEKP 300
DNKDGMVKLNSKMSQIEGNCAANRIFYLAVPQE QTMQGWNRIIIEKP
Sbjct: 241 DNKDGMVKLNSKMSQIEGNCAANRIFYLAVPQEALLDVALSLADSAQTMQGWNRIIIEKP 300
Query: 301 FGFTGLSSHRVTQSLLSRFEEEQIYRIDHLLGKDLIENLTVLRFSNLVFEPLWSRTYIRN 360
FGFTGLSSHRVTQSLLSRFEEEQIYRIDHLLGKDLIENLTVLRFSNLVFEPLWSRTYIRN
Sbjct: 301 FGFTGLSSHRVTQSLLSRFEEEQIYRIDHLLGKDLIENLTVLRFSNLVFEPLWSRTYIRN 360
Query: 361 VQVIFSEETAAEIQGRYFGNYGIIRDIVHSHILQTIALFAMEPPVSLDGEDIRDEKVKVL 420
VQVIFSEETAAEIQGRYFGNYGIIRDIVHSHILQTIALFAMEPPVSLDGEDIRDEKVKVL
Sbjct: 361 VQVIFSEETAAEIQGRYFGNYGIIRDIVHSHILQTIALFAMEPPVSLDGEDIRDEKVKVL 420
Query: 421 RSIRQVNLEDVVLGQLKDTSVKVDRYTKSLTPTYFAAAMYIDNSRWDGVPFLIKTGIGLM 480
RSIRQVNLEDVVLGQLKDTSVKVDRYTKSLTPTYFAAAMYIDNSRWDGVPFLIKTGIGLM
Sbjct: 421 RSIRQVNLEDVVLGQLKDTSVKVDRYTKSLTPTYFAAAMYIDNSRWDGVPFLIKTGIGLM 480
Query: 481 ENRAEIRIQFRHVPGNIYRERFGHDIDLDTNELILRDQPEEAILLKVNNKVPGLGLQLDA 540
ENRAEIRIQFRHVPGNIYRERFGHDIDLDTNELILRDQPEEAILLKVNNKVPGLGLQLDA
Sbjct: 481 ENRAEIRIQFRHVPGNIYRERFGHDIDLDTNELILRDQPEEAILLKVNNKVPGLGLQLDA 540
Query: 541 SELNLLYRDRYNVELPDSYEHLLLDVLDGDSHLFMRSDEVAAAWNVLTPLIHEIDQNRIA 600
SELNLLYRDRYNVELPDSYEHLLLDVLDGDSHLFMRSDEVAAAWNVLTPLIHEIDQNRIA
Sbjct: 541 SELNLLYRDRYNVELPDSYEHLLLDVLDGDSHLFMRSDEVAAAWNVLTPLIHEIDQNRIA 600
Query: 601 PELYEAGGRGPVNAYYLAAKHGVRLDDEW 629
PELYEAGGRGPVNAYYLAAKHGVRLDDEW
Sbjct: 601 PELYEAGGRGPVNAYYLAAKHGVRLDDEW 629
>Os07g0406300 Similar to Glucose-6-phosphate 1-dehydrogenase precursor (EC
1.1.1.49)
Length = 588
Score = 559 bits (1440), Expect = e-159, Method: Compositional matrix adjust.
Identities = 265/484 (54%), Positives = 350/484 (72%), Gaps = 10/484 (2%)
Query: 154 APLCIAVIGATGELAKNKVFPALFALYYSGFLPQNVGIFGYSRKTLTDEDLRSMIEANLT 213
+ + I V+GA+G+LAK K+FPALFALYY LP++ IFGY+R +TD +LR+M+ LT
Sbjct: 98 STVSITVVGASGDLAKKKIFPALFALYYEDCLPKHFTIFGYARSKMTDAELRNMVSKTLT 157
Query: 214 CRVDHHENCDEKLNEFLKRTYYIDAGYDNKDGMVKLNSKMSQIEGNCAANRIFYLAVPQE 273
CR+D ENC+EK+ EFLKR +Y YD+++ + L+ K+ Q EG+ +NR+FYL++P
Sbjct: 158 CRIDKRENCNEKMEEFLKRCFYHSGQYDSEEHFMDLDKKLKQHEGSRVSNRLFYLSIPPN 217
Query: 274 XXXXXXXXXXXXXQTMQGWNRIIIEKPFGFTGLSSHRVTQSLLSRFEEEQIYRIDHLLGK 333
+ GW R+I+EKPFG SS +T+ L E+QI+RIDH LGK
Sbjct: 218 IFLDVVKCASKSASSGNGWTRVIVEKPFGRDSDSSSALTRGLKQYLVEDQIFRIDHYLGK 277
Query: 334 DLIENLTVLRFSNLVFEPLWSRTYIRNVQVIFSEETAAEIQGRYFGNYGIIRDIVHSHIL 393
+L+ENL+VLRFSNLVFEPLWSR YIRNVQ+IFSE+ E +G YF YGIIRDI+ +H+L
Sbjct: 278 ELVENLSVLRFSNLVFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDRYGIIRDIMQNHLL 337
Query: 394 QTIALFAMEPPVSLDGEDIRDEKVKVLRSIRQVNLEDVVLGQLKDTSVKVDRY------- 446
Q +ALFAME PVSL+ EDIR+EKVKVLRS++ + LEDVV+GQ K + Y
Sbjct: 338 QILALFAMETPVSLEAEDIRNEKVKVLRSMKPLQLEDVVIGQYKSHTKGGTTYPGYTEDK 397
Query: 447 ---TKSLTPTYFAAAMYIDNSRWDGVPFLIKTGIGLMENRAEIRIQFRHVPGNIYRERFG 503
S+TPT+ AAA++I+N+RWDGVPFL+K G L AEIR+QFRHVPGN+Y+ FG
Sbjct: 398 TVPKDSVTPTFAAAALFINNARWDGVPFLMKAGKALHTKGAEIRVQFRHVPGNLYKRSFG 457
Query: 504 HDIDLDTNELILRDQPEEAILLKVNNKVPGLGLQLDASELNLLYRDRYNVELPDSYEHLL 563
D+D TNEL++R QP+EAI LK+NNK+PGLG++LD S LNL Y RY+ E+PD+YE LL
Sbjct: 458 TDLDTATNELVIRVQPDEAIYLKINNKIPGLGMRLDRSNLNLHYAARYSKEIPDAYERLL 517
Query: 564 LDVLDGDSHLFMRSDEVAAAWNVLTPLIHEIDQNRIAPELYEAGGRGPVNAYYLAAKHGV 623
LD ++G+ LF+RSDE+ AAW + TPL+ E+++ RIAPELY G RGPV A+YLAAK+ V
Sbjct: 518 LDAIEGERRLFIRSDELDAAWELFTPLLKELEEKRIAPELYPYGSRGPVGAHYLAAKYNV 577
Query: 624 RLDD 627
R D
Sbjct: 578 RWGD 581
>Os03g0412800 Similar to Glucose-6-phosphate dehydrogenase precursor
Length = 577
Score = 555 bits (1429), Expect = e-158, Method: Compositional matrix adjust.
Identities = 265/499 (53%), Positives = 353/499 (70%), Gaps = 20/499 (4%)
Query: 149 PPESAAPLCIAVIGATGELAKNKVFPALFALYYSGFLPQNVGIFGYSRKTLTDEDLRSMI 208
P + + + I V+GA+G+LAK K+FPALFALYY LP++ +FGY+R ++DE+LR+MI
Sbjct: 77 PEQGGSTVSITVVGASGDLAKKKIFPALFALYYEDCLPEHFTVFGYARSKMSDEELRNMI 136
Query: 209 EANLTCRVDHHENCDEKLNEFLKRTYYIDAGYDNKDGMVKLNSKMSQIEGNCAANRIFYL 268
LTCR+D ENC +K+ +FLKR +Y Y++++G +L+ K+ + E NR+FYL
Sbjct: 137 SLTLTCRIDQRENCSDKMEQFLKRCFYQSGQYNSEEGFSELDRKLKEKEAGKVPNRLFYL 196
Query: 269 AVPQEXXXXXXXXXXXXXQTMQGWNRIIIEKPFGFTGLSSHRVTQSLLSRFEEEQIYRID 328
++P + GW R I+EKPFG SS +T++L EEQI+RID
Sbjct: 197 SIPPNIFVDVVRSASRTASSQDGWTRFIVEKPFGRDSESSGELTRNLKKYLAEEQIFRID 256
Query: 329 HLLGKDLIENLTVLRFSNLVFEPLWSRTYIRNVQVIFSEETAAEIQGRYFGNYGIIRDIV 388
H LGK+L+ENL+VLRFSNLVFEPLWSR YIRNVQ+IFSE+ E +G YF NYGIIRDI+
Sbjct: 257 HYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIM 316
Query: 389 HSHILQTIALFAMEPPVSLDGEDIRDEKVKVLRSIRQVNLEDVVLGQLKDTSVKVDRY-- 446
+H+LQ +ALFAME PVSLD EDIR+EKVKVLRS+RQ+ LEDVV+GQ K S Y
Sbjct: 317 QNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRQLRLEDVVVGQYKGHSKGGKTYPA 376
Query: 447 --------TKSLTPTYFAAAMYIDNSRWDGVPFLIKTGIGLMENRAEIRIQFRHVPGNIY 498
+ S+TPT+ AAA++IDN+RWDGVPFL+K G L RAEIR+QFR VPGN+Y
Sbjct: 377 YVDDPTVPSGSITPTFAAAALFIDNARWDGVPFLMKAGKALHTRRAEIRVQFRRVPGNLY 436
Query: 499 RER----------FGHDIDLDTNELILRDQPEEAILLKVNNKVPGLGLQLDASELNLLYR 548
R +++ TNEL+LR QP+EAI LK+N+KVPGLG++LD+S+LNLLY
Sbjct: 437 GRRSRSVGGGGTTATRELEKATNELVLRVQPDEAIYLKINSKVPGLGMRLDSSDLNLLYS 496
Query: 549 DRYNVELPDSYEHLLLDVLDGDSHLFMRSDEVAAAWNVLTPLIHEIDQNRIAPELYEAGG 608
+RY E+PD+YE LLLD ++G+ LF+RSDE+ AAW + TP++ +++ N++APELY G
Sbjct: 497 ERYPAEIPDAYERLLLDAIEGERRLFIRSDELDAAWAIFTPVLADLEANKVAPELYPYGS 556
Query: 609 RGPVNAYYLAAKHGVRLDD 627
RGPV A+YLAA H VR D
Sbjct: 557 RGPVGAHYLAANHNVRWGD 575
>Os04g0485300 Glucose-6-phosphate dehydrogenase
Length = 505
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/483 (42%), Positives = 296/483 (61%), Gaps = 26/483 (5%)
Query: 150 PESAAPLCIAVIGATGELAKNKVFPALFALYYSGFLPQN-VGIFGYSRKTLTDEDLRSMI 208
P L + V+GA+G+LAK K FPALF L+ GF+ V IFGY+R L+D+ LR I
Sbjct: 24 PSEQGCLSVIVLGASGDLAKKKTFPALFHLFAQGFIQSGEVHIFGYARSNLSDDGLRERI 83
Query: 209 EANLTCRVDHHENCDEKLNEFLKRTYYIDAGYDNKDGMVKLNSKMSQIEGNCAAN---RI 265
L + H L++FL+ Y+ YD+ +G KLN ++S+ E + + R+
Sbjct: 84 RGYLKGASEEH------LSDFLQHIKYVSGSYDSGEGFEKLNKEISEYEKSNKSESPRRL 137
Query: 266 FYLAVPQEXXXXXXXXXXXXXQTMQGWNRIIIEKPFGFTGLSSHRVTQSLLSRFEEEQIY 325
FYLA+P GW R+I+EKPFG S+ ++ L F+E Q+Y
Sbjct: 138 FYLALPPSVYPSVCKMIRTYCMNPSGWTRVIVEKPFGKDLDSAEELSAQLGELFDENQLY 197
Query: 326 RIDHLLGKDLIENLTVLRFSNLVFEPLWSRTYIRNVQVIFSEETAAEIQGRYFGNYGIIR 385
RIDH LGK+L++NL VLRF+N +F PLW+R I N+Q++F E+ + +G YF YGIIR
Sbjct: 198 RIDHYLGKELVQNLLVLRFANRLFLPLWNRDNIDNIQIVFREDFGTDGRGGYFDQYGIIR 257
Query: 386 DIVHSHILQTIALFAMEPPVSLDGEDIRDEKVKVLRSIRQVNLEDVVLGQLK----DTSV 441
DI+ +H+LQ L AME PVSL E IRDEKVKVL+S+ + ++VVLGQ + D +V
Sbjct: 258 DIIQNHLLQVFCLVAMEKPVSLKPEHIRDEKVKVLQSVNPIKHDEVVLGQYEGYKDDPTV 317
Query: 442 KVDRYTKSLTPTYFAAAMYIDNSRWDGVPFLIKTGIGLMENRAEIRIQFRHVPGNIYR-E 500
D S TPT+ + + + N RW+GVPF++K G L +AE+R+QF+ VPG+I++ +
Sbjct: 318 PDD----SNTPTFASVVLRVHNERWEGVPFILKAGKALSSRKAEVRVQFKDVPGDIFKCK 373
Query: 501 RFGHDIDLDTNELILRDQPEEAILLKVNNKVPGLGLQLDASELNLLYRDRY-NVELPDSY 559
R G NE ++R QP EA+ +K+ K PGL + + SEL+L Y RY NV++P++Y
Sbjct: 374 RQGR------NEFVIRLQPSEAMYMKLTVKKPGLEMATEQSELDLSYGMRYQNVKIPEAY 427
Query: 560 EHLLLDVLDGDSHLFMRSDEVAAAWNVLTPLIHEIDQNRIAPELYEAGGRGPVNAYYLAA 619
E L+LD + GD F+R DE+ AAW + TPL+H+ID+ ++ Y+ G RGP A L+
Sbjct: 428 ERLILDTIRGDQQHFVRRDELKAAWQIFTPLLHDIDEGKVKSIPYQPGSRGPKEADELSE 487
Query: 620 KHG 622
+ G
Sbjct: 488 RVG 490
>Os02g0600400 Similar to Glucose-6-phosphate dehydrogenase
Length = 517
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/480 (42%), Positives = 292/480 (60%), Gaps = 27/480 (5%)
Query: 156 LCIAVIGATGELAKNKVFPALFALYYSGFLPQN-VGIFGYSRKTLTDEDLRSMIEANLTC 214
L I V+GA+G+LAK K FPALF L+ GFL V IFGY+R ++D+ LR I L
Sbjct: 35 LSIVVLGASGDLAKKKTFPALFHLFQQGFLQSGEVHIFGYARSNISDDGLRERIRGYLKG 94
Query: 215 RVDHHENCDEKLNEFLKRTYYIDAGYDNKDGMVKLNSKMSQIEGN-----CAANRIFYLA 269
D H +++FL+ Y+ Y++ +G LN+ +S+ E + ++ R+FYLA
Sbjct: 95 ASDEH------ISQFLQLIKYVSGSYNSGEGFASLNNAISENETSKNNKPGSSRRLFYLA 148
Query: 270 VPQE---XXXXXXXXXXXXXQTMQGWNRIIIEKPFGFTGLSSHRVTQSLLSRFEEEQIYR 326
+P + GW R+I+EKPFG S+ ++ L F E+Q+YR
Sbjct: 149 LPPSVYPSVCKMIRSYCMNPSSHSGWTRVIVEKPFGKDLESAEELSAQLGELFNEQQLYR 208
Query: 327 IDHLLGKDLIENLTVLRFSNLVFEPLWSRTYIRNVQVIFSEETAAEIQGRYFGNYGIIRD 386
IDH LGK+L++NL VLRF+N +F PLW+R I NVQ++F E+ E +G YF YGIIRD
Sbjct: 209 IDHYLGKELVQNLLVLRFANRLFLPLWNRDNIANVQIVFREDFGTEGRGGYFDQYGIIRD 268
Query: 387 IVHSHILQTIALFAMEPPVSLDGEDIRDEKVKVLRSIRQVNLEDVVLGQ---LKDTSVKV 443
I+ +H+LQ L AME PVSL E IRDEKVKVL+S+ + ++VVLGQ KD S
Sbjct: 269 IIQNHLLQVFCLVAMEKPVSLKPEHIRDEKVKVLQSVTPIKHDEVVLGQYDGYKDDSTVP 328
Query: 444 DRYTKSLTPTYFAAAMYIDNSRWDGVPFLIKTGIGLMENRAEIRIQFRHVPGNIYRERFG 503
D S TPT+ + + ++N RW+GVPF++K G L +AEIR+QF+ PG+I++ +
Sbjct: 329 D---DSNTPTFASLVLRVNNERWEGVPFILKAGKALNNRKAEIRVQFKDAPGDIFKCK-- 383
Query: 504 HDIDLDTNELILRDQPEEAILLKVNNKVPGLGLQLDASELNLLYRDRY-NVELPDSYEHL 562
NE ++R QP EA+ +K+ K PGL + + SEL+L Y RY +V++P++YE L
Sbjct: 384 ---KQGRNEFVIRLQPSEAMYMKLTVKKPGLEMATEQSELDLSYGLRYQDVKIPEAYERL 440
Query: 563 LLDVLDGDSHLFMRSDEVAAAWNVLTPLIHEIDQNRIAPELYEAGGRGPVNAYYLAAKHG 622
+LD + GD F+R DE+ AAW + TPL+H+ID ++ Y+ G RGP A L+ + G
Sbjct: 441 ILDTIRGDQQHFVRRDELKAAWEIFTPLLHDIDDGKVKALPYKPGTRGPPEADELSKRMG 500
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,020,390
Number of extensions: 820308
Number of successful extensions: 1711
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1695
Number of HSP's successfully gapped: 5
Length of query: 629
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 522
Effective length of database: 11,448,903
Effective search space: 5976327366
Effective search space used: 5976327366
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)