Os07g0406300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glucose-6-phosphate 1-dehydrogenase precursor (EC 1.1.1.49).
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Os07g0406300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucose-6-phosphate 1-dehydrogenase precursor (EC 1.1.1.49).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.97 | 0.22 | 10.6 | -0.333 | 0.847 | -0.232 | -0.497 | 2.15 | -0.146 | 16.2 | 0.6708 | 721 | -- | -- |
| 23.76 | 0.227 | 10.6 | -0.48 | 0.759 | -0.373 | 0.198 | -- | -0.227 | 16.2 | 53.11 | 2534 | -- | -- |
| 22.21 | 0.219 | 10.6 | -0.335 | 0.821 | -0.215 | -- | 1.66 | -0.145 | 16.2 | 6.951 | 759 | -- | -- |
| 23.13 | 0.224 | 10.6 | -0.539 | 0.749 | -0.705 | -- | -- | -0.228 | 15.9 | 55.64 | 2598 | -- | -- |
| 37.28 | 0.284 | 10.6 | -0.503 | -- | 0.694 | -- | 1.29 | -0.265 | -- | -0.07823 | 489 | -- | -- |
| 26.27 | 0.24 | 10.6 | -0.442 | 0.735 | -- | 0.376 | -- | -0.208 | 16 | -- | -- | -- | -- |
| 26.66 | 0.242 | 10.6 | -0.437 | 0.736 | -- | -- | -- | -0.205 | 15.9 | -- | -- | -- | -- |
| 38.62 | 0.289 | 10.6 | -0.489 | -- | 0.715 | -- | -- | -0.278 | -- | -10.37 | 445 | -- | -- |
| 29.16 | 0.252 | 10.6 | -- | 0.728 | -0.524 | -- | -- | -0.163 | 16.1 | 51.94 | 2530 | -- | -- |
| 56.39 | 0.351 | 10.6 | -0.467 | -- | -- | -- | -- | -0.225 | -- | -- | -- | -- | -- |
| 31.69 | 0.263 | 10.6 | -- | 0.745 | -- | -- | -- | -0.157 | 15.9 | -- | -- | -- | -- |
| 44.91 | 0.312 | 10.6 | -- | -- | 0.701 | -- | -- | -0.221 | -- | -7.092 | 421 | -- | -- |
| 62.15 | 0.368 | 10.6 | -- | -- | -- | -- | -- | -0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.61 | radiation | 1 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 4 | 21.81 | radiation | 40 | 720 | < th | dose dependent | rect. | 5 | 10 |
| 6 | 21.86 | radiation | 1 | 720 | > th | dose dependent | sin | 3 | NA |
| 10 | 21.90 | radiation | 40 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 12 | 21.91 | radiation | 40 | 720 | < th | dose independent | rect. | 5 | 9 |
| 13 | 21.91 | radiation | 40 | 720 | < th | dose dependent | sin | 2 | NA |
| 16 | 21.93 | radiation | 40 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 18 | 21.94 | radiation | 40 | 720 | < th | dose dependent | rect. | 4 | 12 |
| 21 | 21.95 | radiation | 40 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 22 | 21.97 | radiation | 1 | 720 | > th | dose dependent | no | NA | NA |
| 23 | 21.97 | radiation | 1 | 720 | > th | dose dependent | rect. | 5 | 10 |
| 27 | 21.97 | radiation | 1 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 150 | 22.02 | radiation | 30 | 720 | > th | dose independent | rect. | 14 | 23 |
| 159 | 22.04 | radiation | 40 | 720 | < th | dose dependent | no | NA | NA |
| 161 | 22.04 | radiation | 40 | 720 | < th | dose dependent | rect. | 14 | 23 |
| 175 | 22.06 | radiation | 30 | 720 | > th | dose independent | sin | 3 | NA |
| 181 | 22.06 | radiation | 40 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 208 | 22.10 | radiation | 40 | 720 | > th | dose independent | rect. | 9 | 4 |
| 229 | 22.11 | radiation | 30 | 720 | > th | dose independent | rect. | 8 | 6 |
| 249 | 22.12 | radiation | 40 | 720 | < th | dose independent | rect. | 19 | 23 |
| 420 | 22.15 | radiation | 30 | 720 | > th | dose independent | no | NA | NA |
| 534 | 22.15 | radiation | 40 | 720 | > th | dose independent | rect. | 12 | 23 |
| 546 | 22.15 | radiation | 1 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 566 | 22.16 | radiation | 40 | 720 | < th | dose independent | sin | 2 | NA |
| 608 | 22.16 | radiation | 1 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 628 | 22.17 | radiation | 40 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 642 | 22.20 | radiation | 30 | 720 | < th | dose independent | rect. | 3 | 13 |
| 643 | 22.20 | radiation | 30 | 720 | < th | dose independent | rect. | 11 | 23 |
| 644 | 22.20 | radiation | 40 | 720 | < th | dose independent | rect. | 15 | 23 |
| 673 | 22.21 | radiation | 40 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 888 | 22.24 | radiation | 30 | 720 | < th | dose independent | rect. | 17 | 23 |