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Os03g0412800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glucose-6-phosphate dehydrogenase precursor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0257) R2 : 0.896
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.04 (0.0859) R2dC : 0.471 R2C : 0.772
β3 : -2.12 (0.117) R2dE : 0.124 R2E : 0.424
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.057 (0.0542) R2dN8 : 0.000329 R2N8 : -0.000383
σ : 0.483
deviance : 107.61
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_____
C
peak time of C : 16.9
E
wheather : wind
threshold : 2.797
memory length : 109
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.88
open length of G : 4.32

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
106.75 0.485 11.4 0.111 3.04 -2.18 -0.443 0.341 -0.0542 16.9 2.725 106 2.93 4.28
106.75 0.481 11.4 0.0941 3.05 -2.17 -0.553 -- -0.0556 16.9 2.691 108 2.92 4.32
106.97 0.482 11.4 0.141 3.06 -2.23 -- 0.927 -0.0596 16.9 2.621 108 2.91 4.29
107.41 0.483 11.4 0.0866 3.04 -2.13 -- -- -0.0485 16.9 2.787 109 2.88 4.31
360.2 0.884 11.4 0.0748 -- -3.48 -- -0.246 -0.0293 -- 8.544 51 3.3 5.15
182.67 0.634 11.4 -0.0595 4.03 -- 0.319 -- -0.0217 17.1 -- -- -- --
182.93 0.633 11.4 -0.059 4.03 -- -- -- -0.0201 17.1 -- -- -- --
322.28 0.836 11.3 0.0184 -- -3.29 -- -- 0.183 -- 12.58 69 1.98 6.34
107.61 0.483 11.4 -- 3.04 -2.12 -- -- -0.057 16.9 2.797 109 2.88 4.32
1035.78 1.5 11.4 -0.204 -- -- -- -- -0.123 -- -- -- -- --
183.02 0.633 11.4 -- 4.03 -- -- -- -0.0135 17.1 -- -- -- --
238.11 0.719 11.3 -- -- -3.5 -- -- 0.244 -- 12.53 259 0.00862 7.08
1036.88 1.5 11.4 -- -- -- -- -- -0.1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 110.98 wind 3.0 90 < th dose dependent rect. 3 4
4 113.01 wind 3.0 270 < th dose dependent rect. 3 2
8 116.54 wind 1.0 270 < th dose independent rect. 4 1
23 119.04 temperature 10.0 270 > th dose dependent rect. 2 3
38 120.11 wind 3.0 90 < th dose dependent rect. 3 10
44 120.51 temperature 10.0 270 > th dose dependent rect. 1 5
48 120.91 wind 3.0 90 < th dose dependent rect. 3 16
63 121.61 humidity 60.0 270 > th dose dependent rect. 2 3
67 121.67 wind 3.0 90 < th dose dependent rect. 3 12
72 121.90 precipitation 0.1 270 < th dose independent rect. 3 2
73 121.90 precipitation 0.1 270 < th dose dependent rect. 3 2
77 122.19 wind 1.0 90 > th dose independent rect. 23 14
86 122.53 temperature 20.0 90 > th dose independent rect. 3 4
91 122.87 temperature 15.0 10 > th dose dependent rect. 4 4
101 123.62 temperature 25.0 270 < th dose independent rect. 2 3
104 123.85 wind 9.0 270 < th dose independent rect. 5 21
116 124.37 humidity 50.0 270 > th dose dependent rect. 1 5
123 124.47 precipitation 0.1 270 < th dose independent rect. 1 5
124 124.47 precipitation 0.1 270 < th dose dependent rect. 1 5
126 124.59 temperature 10.0 270 > th dose independent rect. 2 3
129 124.59 humidity 50.0 270 > th dose independent rect. 2 3
132 124.59 atmosphere 995.0 270 > th dose independent rect. 2 3
133 124.59 atmosphere 1010.0 270 < th dose independent rect. 2 3
135 124.59 radiation 20.0 270 < th dose independent rect. 2 3
139 124.59 temperature 10.0 270 > th dose independent rect. 5 21
140 124.61 radiation 30.0 270 < th dose dependent rect. 2 3
144 124.63 radiation 1.0 270 < th dose independent rect. 2 3
207 125.93 wind 9.0 270 < th dose independent rect. 6 19
208 125.95 wind 1.0 90 < th dose independent rect. 4 8
216 126.15 precipitation 0.1 270 < th dose independent rect. 5 21
217 126.15 precipitation 0.1 270 < th dose dependent rect. 5 21
220 126.24 temperature 15.0 270 > th dose independent rect. 24 23
231 126.54 wind 7.0 270 < th dose independent rect. 1 5
238 126.61 temperature 10.0 270 > th dose independent rect. 1 5
240 126.61 temperature 30.0 270 < th dose independent rect. 1 5
241 126.61 humidity 50.0 270 > th dose independent rect. 1 5
244 126.61 atmosphere 995.0 270 > th dose independent rect. 1 5
245 126.61 atmosphere 1015.0 270 < th dose independent rect. 1 5
246 126.61 radiation 20.0 270 < th dose independent rect. 1 5
249 126.61 temperature 10.0 270 > th dose independent rect. 6 19
262 126.84 wind 9.0 10 < th dose independent rect. 8 20
280 127.17 precipitation 0.1 10 < th dose independent rect. 4 4
281 127.17 precipitation 0.1 10 < th dose dependent rect. 4 4
286 127.22 radiation 40.0 270 < th dose dependent rect. 1 5
287 127.23 precipitation 0.1 270 < th dose independent rect. 6 19
288 127.23 precipitation 0.1 270 < th dose dependent rect. 6 19
297 127.36 wind 1.0 270 > th dose independent rect. 4 22
324 127.60 wind 9.0 10 < th dose independent rect. 4 4
325 127.60 temperature 10.0 10 > th dose independent rect. 4 4
327 127.60 temperature 30.0 10 < th dose independent rect. 4 4
328 127.60 humidity 50.0 10 > th dose independent rect. 4 4
330 127.60 atmosphere 995.0 10 > th dose independent rect. 4 4
331 127.60 atmosphere 1015.0 10 < th dose independent rect. 4 4
332 127.60 temperature 10.0 10 > th dose independent rect. 8 20
376 127.94 radiation 40.0 10 < th dose independent rect. 4 4
397 128.29 wind 7.0 270 < th dose independent rect. 23 1
412 128.40 temperature 10.0 270 > th dose independent rect. 23 1
413 128.40 temperature 30.0 270 < th dose independent rect. 23 1
414 128.40 humidity 50.0 270 > th dose independent rect. 23 1
417 128.40 atmosphere 995.0 270 > th dose independent rect. 23 1
418 128.40 radiation 1.0 270 < th dose independent rect. 23 1
424 128.40 radiation 1.0 270 < th dose dependent rect. 23 1
437 128.54 precipitation 0.1 270 < th dose independent rect. 23 1
438 128.54 precipitation 0.1 270 < th dose dependent rect. 23 1
455 128.82 humidity 50.0 270 > th dose dependent rect. 23 1
471 129.14 temperature 15.0 720 > th dose dependent rect. 19 2
484 129.24 wind 5.0 30 < th dose independent rect. 23 5
499 129.31 temperature 10.0 270 > th dose dependent rect. 6 7
506 129.38 temperature 15.0 720 > th dose dependent rect. 18 4
513 129.43 radiation 40.0 270 < th dose dependent rect. 15 15
533 129.65 temperature 10.0 30 > th dose independent rect. 23 5
534 129.65 temperature 30.0 30 < th dose independent rect. 23 5
535 129.65 humidity 50.0 30 > th dose independent rect. 23 5
538 129.65 atmosphere 995.0 30 > th dose independent rect. 23 5
539 129.65 radiation 1.0 30 < th dose independent rect. 23 5
544 129.65 temperature 10.0 30 > th dose independent rect. 4 19
546 129.65 atmosphere 1015.0 30 < th dose independent rect. 4 19
547 129.65 temperature 15.0 270 > th dose independent rect. 1 20
548 129.65 radiation 1.0 30 < th dose dependent rect. 23 5
553 129.67 temperature 15.0 270 > th dose independent rect. 11 10
562 129.84 precipitation 0.1 270 < th dose independent rect. 1 20
563 129.84 precipitation 0.1 270 < th dose dependent rect. 1 20
570 129.95 humidity 60.0 270 > th dose independent rect. 21 14
623 130.29 wind 1.0 90 < th dose independent rect. 4 14
630 130.35 wind 1.0 270 > th dose independent rect. 6 19
638 130.52 temperature 25.0 720 > th dose dependent rect. 20 1
644 130.60 wind 9.0 30 < th dose independent rect. 4 19
656 130.68 precipitation 0.1 270 < th dose independent rect. 21 4
657 130.68 precipitation 0.1 270 < th dose dependent rect. 21 4
659 130.69 precipitation 0.1 30 < th dose independent rect. 4 19
660 130.69 precipitation 0.1 30 < th dose dependent rect. 4 19
663 130.76 wind 9.0 270 < th dose independent rect. 21 4
664 130.76 atmosphere 1015.0 270 < th dose independent rect. 1 20
668 130.77 temperature 10.0 270 > th dose independent rect. 21 4
669 130.77 temperature 30.0 270 < th dose independent rect. 21 4
670 130.77 humidity 50.0 270 > th dose independent rect. 21 4
673 130.77 atmosphere 995.0 270 > th dose independent rect. 21 4
674 130.77 radiation 1.0 270 < th dose independent rect. 21 4
681 130.77 radiation 1.0 270 < th dose dependent rect. 21 4
706 131.15 precipitation 0.1 30 < th dose independent rect. 23 5
707 131.15 precipitation 0.1 30 < th dose dependent rect. 23 5
746 131.41 radiation 20.0 270 < th dose independent rect. 15 15
757 131.47 wind 9.0 270 < th dose independent rect. 21 14
758 131.50 radiation 40.0 270 < th dose independent rect. 13 17
789 131.79 atmosphere 1015.0 270 < th dose independent rect. 11 10
790 131.79 humidity 50.0 270 > th dose dependent rect. 21 4
801 131.94 atmosphere 995.0 270 > th dose independent rect. 1 20
808 131.97 temperature 10.0 270 > th dose independent rect. 21 14
809 131.97 atmosphere 995.0 270 > th dose independent rect. 21 14
844 132.25 wind 9.0 270 < th dose independent rect. 1 20
847 132.27 temperature 25.0 270 < th dose independent rect. 1 18
850 132.31 wind 9.0 270 < th dose dependent rect. 23 1
857 132.40 atmosphere 995.0 10 > th dose independent rect. 8 20
860 132.44 atmosphere 995.0 30 > th dose independent rect. 4 19
881 132.72 humidity 50.0 30 > th dose dependent rect. 23 5
888 132.82 wind 3.0 90 < th dose dependent sin 5 NA
901 132.90 temperature 30.0 30 < th dose dependent rect. 23 5
907 132.96 precipitation 0.1 270 < th dose independent rect. 24 22
908 132.96 precipitation 0.1 270 < th dose dependent rect. 24 22
925 133.09 atmosphere 1015.0 270 < th dose dependent rect. 3 2
943 133.20 temperature 15.0 270 > th dose independent rect. 15 15
1000 133.37 humidity 50.0 90 > th dose dependent rect. 21 6