Os03g0318500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD).
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Os03g0318500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (EC 1.1.1.49) (G6PD).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.67 | 0.588 | 8.38 | 0.58 | 1.43 | -0.921 | -0.452 | 1.16 | -0.388 | 22.4 | 29.25 | 257 | -- | -- |
| 156.84 | 0.583 | 8.37 | 0.714 | 1.4 | -0.85 | -0.441 | -- | -0.371 | 22.5 | 29.1 | 308 | -- | -- |
| 157.34 | 0.584 | 8.38 | 0.611 | 1.44 | -0.884 | -- | 1.02 | -0.393 | 22.4 | 29.2 | 264 | -- | -- |
| 157.67 | 0.585 | 8.37 | 0.736 | 1.4 | -0.839 | -- | -- | -0.369 | 22.5 | 29.07 | 308 | -- | -- |
| 247.81 | 0.733 | 8.37 | 0.421 | -- | -1.45 | -- | 1.13 | -0.484 | -- | 28.4 | 687 | -- | -- |
| 177.01 | 0.624 | 8.36 | 0.872 | 1.51 | -- | -0.181 | -- | -0.3 | 21.3 | -- | -- | -- | -- |
| 177.12 | 0.623 | 8.36 | 0.879 | 1.51 | -- | -- | -- | -0.3 | 21.3 | -- | -- | -- | -- |
| 247.76 | 0.733 | 8.35 | 0.62 | -- | -1.4 | -- | -- | -0.441 | -- | 28.4 | 686 | -- | -- |
| 170.95 | 0.609 | 8.39 | -- | 1.32 | -1 | -- | -- | -0.458 | 22.8 | 28.76 | 405 | -- | -- |
| 310.25 | 0.823 | 8.32 | 0.886 | -- | -- | -- | -- | -0.306 | -- | -- | -- | -- | -- |
| 197.49 | 0.657 | 8.38 | -- | 1.51 | -- | -- | -- | -0.398 | 21.4 | -- | -- | -- | -- |
| 257.54 | 0.747 | 8.37 | -- | -- | -1.5 | -- | -- | -0.517 | -- | 28.48 | 695 | -- | -- |
| 330.98 | 0.849 | 8.34 | -- | -- | -- | -- | -- | -0.404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.63 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 15 | 154.40 | temperature | 25 | 30 | > th | dose dependent | rect. | 12 | 10 |
| 22 | 154.72 | temperature | 15 | 30 | > th | dose dependent | rect. | 12 | 10 |
| 40 | 155.54 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 43 | 155.65 | temperature | 25 | 30 | > th | dose dependent | rect. | 12 | 17 |
| 48 | 155.75 | humidity | 90 | 90 | < th | dose independent | rect. | 5 | 8 |
| 52 | 155.78 | humidity | 70 | 90 | < th | dose independent | rect. | 12 | 19 |
| 56 | 155.84 | temperature | 25 | 30 | > th | dose dependent | rect. | 12 | 14 |
| 60 | 155.88 | humidity | 70 | 90 | < th | dose independent | rect. | 12 | 8 |
| 86 | 156.15 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 15 |
| 114 | 156.53 | temperature | 25 | 270 | > th | dose dependent | rect. | 10 | 8 |
| 120 | 156.62 | temperature | 25 | 270 | > th | dose dependent | rect. | 10 | 10 |
| 121 | 156.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 153 | 157.05 | temperature | 25 | 270 | > th | dose dependent | rect. | 10 | 18 |
| 187 | 157.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 189 | 157.63 | temperature | 25 | 10 | > th | dose dependent | sin | 17 | NA |
| 194 | 157.70 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 9 |
| 218 | 157.77 | wind | 7 | 30 | < th | dose independent | rect. | 12 | 10 |
| 242 | 158.05 | temperature | 25 | 270 | > th | dose dependent | sin | 21 | NA |
| 259 | 158.11 | humidity | 70 | 90 | > th | dose independent | rect. | 11 | 14 |
| 280 | 158.17 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 21 |
| 298 | 158.32 | humidity | 70 | 270 | > th | dose independent | rect. | 8 | 15 |
| 302 | 158.36 | radiation | 1 | 270 | > th | dose independent | rect. | 4 | 8 |
| 320 | 158.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 14 | 8 |
| 343 | 158.62 | radiation | 10 | 90 | < th | dose independent | rect. | 9 | 16 |
| 355 | 158.74 | humidity | 70 | 90 | > th | dose independent | rect. | 13 | 12 |
| 360 | 158.77 | wind | 7 | 270 | < th | dose independent | rect. | 12 | 17 |
| 366 | 158.85 | wind | 7 | 270 | < th | dose independent | rect. | 11 | 7 |
| 367 | 158.85 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 13 | 19 |
| 375 | 158.88 | humidity | 70 | 90 | > th | dose independent | rect. | 17 | 8 |
| 417 | 159.02 | temperature | 25 | 30 | > th | dose dependent | rect. | 12 | 23 |
| 444 | 159.17 | wind | 7 | 270 | < th | dose independent | rect. | 10 | 22 |
| 505 | 159.36 | humidity | 90 | 90 | < th | dose dependent | rect. | 12 | 9 |
| 514 | 159.39 | humidity | 70 | 90 | < th | dose independent | sin | 16 | NA |
| 522 | 159.39 | temperature | 15 | 270 | > th | dose independent | rect. | 12 | 16 |
| 536 | 159.41 | temperature | 15 | 1440 | > th | dose independent | rect. | 13 | 10 |
| 542 | 159.42 | radiation | 20 | 90 | < th | dose dependent | rect. | 9 | 16 |
| 548 | 159.43 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 12 | 10 |
| 550 | 159.43 | humidity | 80 | 90 | < th | dose dependent | rect. | 12 | 20 |
| 551 | 159.43 | temperature | 25 | 270 | > th | dose dependent | rect. | 23 | 21 |
| 552 | 159.44 | temperature | 25 | 270 | > th | dose dependent | rect. | 23 | 19 |
| 569 | 159.51 | humidity | 70 | 270 | < th | dose independent | sin | 18 | NA |
| 572 | 159.52 | humidity | 70 | 90 | > th | dose independent | sin | 16 | NA |
| 587 | 159.59 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 588 | 159.60 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 23 |
| 594 | 159.62 | temperature | 10 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 609 | 159.67 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 634 | 159.74 | radiation | 30 | 10 | < th | dose independent | rect. | 1 | 10 |
| 639 | 159.75 | radiation | 40 | 270 | < th | dose dependent | rect. | 8 | 15 |
| 746 | 160.02 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 747 | 160.03 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 780 | 160.06 | humidity | 50 | 270 | > th | dose independent | rect. | 8 | 15 |
| 838 | 160.18 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 23 | 10 |
| 866 | 160.25 | radiation | 1 | 270 | < th | dose independent | rect. | 23 | 12 |
| 878 | 160.28 | temperature | 30 | 270 | > th | dose independent | rect. | 12 | 6 |
| 887 | 160.28 | radiation | 1 | 270 | < th | dose independent | rect. | 23 | 14 |
| 897 | 160.29 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 7 |
| 925 | 160.35 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 14 | 8 |
| 936 | 160.38 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 990 | 160.49 | wind | 9 | 30 | > th | dose dependent | rect. | 17 | 21 |