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Os04g0485300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glucose-6-phosphate dehydrogenase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0225) R2 : 0.749
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.03 (0.0553) R2dC : 0.745 R2C : 0.74
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.17 (0.0473) R2dN8 : 0.00924 R2N8 : 0.0037
σ : 0.424
deviance : 82.08
__
_____
C
peak time of C : 14.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.53 0.363 11.1 -0.475 1.95 0.527 -0.486 -1.16 0.243 14.6 19.96 1294 -- --
62.65 0.369 11.1 -0.517 1.95 0.553 -0.546 -- 0.238 14.6 20 1294 -- --
60.32 0.362 11.1 -0.471 1.95 0.54 -- -1.23 0.242 14.6 19.98 1286 -- --
64.14 0.373 11.1 -0.514 1.95 0.549 -- -- 0.235 14.6 20 1294 -- --
224.37 0.701 11.1 -0.685 -- -1.05 -- 0.218 0.0768 -- 19.96 1262 -- --
70.83 0.395 11.1 -0.6 2.02 -- -0.596 -- 0.105 14.5 -- -- -- --
72.11 0.398 11.1 -0.615 2.02 -- -- -- 0.102 14.5 -- -- -- --
139.04 0.549 11.2 0.101 -- -1.15 -- -- 0.443 -- 1.41 248 -- --
71.23 0.393 11.1 -- 1.95 0.539 -- -- 0.238 14.7 27.86 1240 -- --
312.65 0.826 11.1 -0.701 -- -- -- -- 0.0517 -- -- -- -- --
82.08 0.424 11.1 -- 2.03 -- -- -- 0.17 14.5 -- -- -- --
93.35 0.45 11.1 -- -- -1.67 -- -- 0.109 -- 0.4275 336 -- --
325.61 0.842 11.1 -- -- -- -- -- 0.129 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.61 humidity 50.0 270 > th dose independent rect. 5 10
2 53.63 humidity 50.0 270 > th dose independent rect. 6 19
3 53.78 wind 9.0 270 < th dose independent rect. 15 14
4 53.78 humidity 50.0 270 > th dose independent rect. 5 21
6 53.99 wind 5.0 270 < th dose independent rect. 2 3
8 54.09 atmosphere 995.0 270 > th dose independent rect. 5 10
10 54.18 temperature 10.0 270 > th dose independent rect. 5 10
11 54.18 atmosphere 1015.0 270 < th dose independent rect. 5 10
12 54.18 temperature 10.0 270 > th dose independent rect. 15 14
14 54.24 wind 5.0 270 < th dose independent rect. 1 5
16 54.32 precipitation 0.1 270 < th dose independent rect. 5 10
17 54.32 precipitation 0.1 270 < th dose dependent rect. 5 10
18 54.32 radiation 1.0 270 < th dose dependent rect. 1 18
19 54.36 wind 9.0 270 < th dose dependent rect. 2 3
20 54.39 radiation 40.0 270 < th dose independent rect. 15 14
26 54.68 wind 9.0 270 < th dose dependent rect. 1 5
28 54.79 precipitation 0.1 270 < th dose independent rect. 2 3
29 54.79 precipitation 0.1 270 < th dose dependent rect. 2 3
30 54.80 wind 9.0 270 < th dose independent rect. 5 10
34 54.88 temperature 10.0 270 > th dose independent rect. 2 3
36 54.88 temperature 30.0 270 < th dose independent rect. 2 3
37 54.88 humidity 50.0 270 > th dose independent rect. 2 3
40 54.88 atmosphere 995.0 270 > th dose independent rect. 2 3
41 54.88 atmosphere 1010.0 270 < th dose independent rect. 2 3
43 54.88 radiation 20.0 270 < th dose independent rect. 2 3
46 54.88 temperature 10.0 270 > th dose independent rect. 5 21
48 54.89 radiation 40.0 270 < th dose dependent rect. 2 3
49 54.90 radiation 20.0 270 < th dose dependent rect. 2 3
51 54.92 radiation 1.0 270 < th dose independent rect. 2 3
57 55.04 precipitation 0.1 270 < th dose independent rect. 5 21
58 55.04 precipitation 0.1 270 < th dose dependent rect. 5 21
65 55.17 precipitation 0.1 270 < th dose independent rect. 1 5
66 55.17 precipitation 0.1 270 < th dose dependent rect. 1 5
67 55.19 precipitation 0.1 270 < th dose independent rect. 15 14
68 55.19 precipitation 0.1 270 < th dose dependent rect. 15 14
72 55.21 atmosphere 995.0 270 > th dose independent rect. 15 14
74 55.24 radiation 1.0 270 < th dose dependent rect. 1 10
78 55.28 temperature 10.0 270 > th dose independent rect. 1 5
80 55.28 temperature 30.0 270 < th dose independent rect. 1 5
81 55.28 humidity 50.0 270 > th dose independent rect. 1 5
84 55.28 atmosphere 995.0 270 > th dose independent rect. 1 5
85 55.28 atmosphere 1015.0 270 < th dose independent rect. 1 5
86 55.28 radiation 20.0 270 < th dose independent rect. 1 5
89 55.28 temperature 10.0 270 > th dose independent rect. 6 19
90 55.28 precipitation 0.1 270 < th dose independent rect. 6 19
92 55.28 precipitation 0.1 270 < th dose dependent rect. 6 19
93 55.29 radiation 40.0 270 < th dose independent rect. 6 19
94 55.31 radiation 40.0 270 < th dose dependent rect. 1 5
100 55.36 humidity 50.0 270 > th dose dependent rect. 2 3
101 55.37 radiation 1.0 270 < th dose dependent rect. 1 5
124 55.47 radiation 1.0 270 < th dose independent rect. 1 5
143 55.58 wind 9.0 270 < th dose independent rect. 5 21
166 55.80 wind 9.0 270 < th dose independent rect. 6 19
168 55.81 wind 5.0 270 < th dose independent rect. 3 1
169 55.82 radiation 1.0 270 < th dose independent rect. 1 18
171 55.83 atmosphere 1015.0 270 < th dose independent rect. 6 19
173 55.84 wind 9.0 270 < th dose dependent rect. 1 18
175 55.86 radiation 1.0 270 < th dose independent rect. 1 10
176 55.87 humidity 50.0 270 > th dose dependent rect. 1 5
195 55.90 temperature 10.0 270 > th dose dependent rect. 2 3
198 55.92 wind 7.0 270 < th dose independent rect. 1 18
205 55.94 humidity 50.0 90 > th dose dependent rect. 7 20
223 56.07 radiation 1.0 270 < th dose dependent sin 3 NA
224 56.07 wind 9.0 90 < th dose dependent rect. 3 17
226 56.11 radiation 40.0 270 < th dose independent rect. 6 9
268 56.35 precipitation 0.1 270 < th dose independent rect. 19 6
270 56.35 precipitation 0.1 270 < th dose dependent rect. 19 6
279 56.40 precipitation 0.1 270 < th dose independent rect. 1 18
280 56.40 precipitation 0.1 270 < th dose dependent rect. 1 18
284 56.45 temperature 30.0 270 < th dose independent rect. 5 10
287 56.47 temperature 10.0 270 > th dose dependent rect. 1 5
308 56.52 wind 5.0 10 < th dose independent rect. 3 5
310 56.53 humidity 60.0 270 > th dose independent rect. 19 6
319 56.55 temperature 10.0 270 > th dose independent rect. 19 6
320 56.55 temperature 30.0 270 < th dose independent rect. 19 6
322 56.55 atmosphere 995.0 270 > th dose independent rect. 19 6
323 56.55 radiation 1.0 270 < th dose independent rect. 19 6
328 56.55 temperature 10.0 270 > th dose independent rect. 1 18
329 56.55 atmosphere 1015.0 270 < th dose independent rect. 1 18
331 56.55 radiation 1.0 270 < th dose dependent rect. 19 6
337 56.58 wind 9.0 270 < th dose independent rect. 19 6
340 56.60 atmosphere 995.0 90 > th dose independent rect. 7 20
349 56.63 temperature 10.0 270 > th dose independent rect. 3 1
351 56.63 temperature 30.0 270 < th dose independent rect. 3 1
352 56.63 humidity 50.0 270 > th dose independent rect. 3 1
355 56.63 atmosphere 995.0 270 > th dose independent rect. 3 1
356 56.63 atmosphere 1010.0 270 < th dose independent rect. 3 1
358 56.63 radiation 1.0 270 < th dose independent rect. 3 1
363 56.63 temperature 10.0 270 > th dose independent rect. 4 23
364 56.63 radiation 1.0 270 < th dose dependent rect. 3 1
383 56.67 radiation 40.0 270 < th dose dependent rect. 6 19
434 56.73 atmosphere 1015.0 270 < th dose independent rect. 19 6
467 56.80 wind 9.0 10 < th dose dependent rect. 3 5
470 56.82 wind 1.0 270 > th dose independent rect. 2 3
473 56.82 wind 9.0 90 < th dose independent rect. 3 17
490 56.88 atmosphere 1015.0 270 < th dose dependent rect. 2 3
497 56.90 atmosphere 995.0 270 > th dose independent rect. 1 18
522 56.92 precipitation 0.1 10 < th dose independent rect. 8 19
524 56.92 precipitation 0.1 10 < th dose dependent rect. 8 19
571 57.07 temperature 10.0 90 > th dose independent rect. 3 17
572 57.07 atmosphere 1015.0 90 < th dose independent rect. 3 17
589 57.08 temperature 10.0 270 > th dose dependent rect. 3 1
667 57.26 temperature 10.0 270 > th dose dependent rect. 19 6
679 57.31 humidity 50.0 90 > th dose dependent rect. 20 7
683 57.32 wind 1.0 270 > th dose independent rect. 3 1
725 57.41 atmosphere 1015.0 90 < th dose independent rect. 21 6
730 57.43 temperature 10.0 10 > th dose independent rect. 3 5
732 57.43 temperature 30.0 10 < th dose independent rect. 3 5
733 57.43 humidity 50.0 10 > th dose independent rect. 3 5
735 57.43 atmosphere 995.0 10 > th dose independent rect. 3 5
736 57.43 atmosphere 1015.0 10 < th dose independent rect. 3 5
738 57.43 temperature 10.0 10 > th dose independent rect. 8 19
760 57.49 precipitation 0.1 90 < th dose independent rect. 3 17
766 57.49 precipitation 0.1 90 < th dose dependent rect. 3 17
767 57.50 radiation 40.0 270 < th dose independent rect. 11 14
792 57.55 radiation 40.0 270 < th dose independent rect. 20 15
805 57.58 radiation 40.0 10 < th dose independent rect. 3 5
825 57.60 radiation 40.0 270 < th dose independent rect. 20 17
845 57.65 precipitation 0.1 10 < th dose independent rect. 3 5
848 57.65 precipitation 0.1 10 < th dose dependent rect. 3 5
857 57.68 wind 1.0 270 > th dose independent rect. 5 10
861 57.69 temperature 30.0 90 < th dose independent rect. 7 20
889 57.73 atmosphere 1015.0 10 < th dose independent rect. 8 19
905 57.77 temperature 30.0 90 < th dose dependent rect. 3 4
911 57.80 wind 1.0 270 > th dose independent rect. 19 6
930 57.82 wind 1.0 270 > th dose independent rect. 6 19
940 57.83 wind 9.0 10 < th dose independent rect. 8 19
970 57.87 radiation 1.0 270 > th dose independent rect. 5 10
974 57.87 humidity 50.0 270 > th dose dependent rect. 6 9
978 57.88 atmosphere 995.0 10 > th dose independent rect. 8 19
983 57.89 atmosphere 995.0 90 > th dose dependent rect. 3 3
989 57.90 temperature 10.0 90 > th dose dependent rect. 21 6
991 57.91 radiation 1.0 270 < th dose independent sin 3 NA
997 57.93 precipitation 0.1 10 < th dose independent rect. 20 7