BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0271200 Os03g0271200|AK120241
(817 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0271200 Similar to Chloroplastic outer envelope membra... 1454 0.0
Os11g0116500 Similar to Chloroplastic outer envelope membra... 888 0.0
Os02g0196300 Bacterial surface antigen (D15) family protein 95 2e-19
Os05g0510200 Similar to Glycine-rich cell wall structural p... 79 2e-14
>Os03g0271200 Similar to Chloroplastic outer envelope membrane protein (OEP75)
precursor (Outer membrane protein)
Length = 817
Score = 1454 bits (3764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/817 (87%), Positives = 717/817 (87%)
Query: 1 MALTSQSLFFSPLXXXXXXXXXXXXXXXXXXXXXXXXXHNSQPHGHPQQPLAVAXXXXXX 60
MALTSQSLFFSPL HNSQPHGHPQQPLAVA
Sbjct: 1 MALTSQSLFFSPLAAGPSRRVRGRGRSTSVSAAASASSHNSQPHGHPQQPLAVASSSSKS 60
Query: 61 XXXXXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
T
Sbjct: 61 ESKGSKTFALASAITAAASGAFLLASSGGGFGGGAGGPLGGGGGGWGAGGGGGGGGGGGG 120
Query: 121 XXXWSRIFSGGAAHADEKSSGDWDPHGLPANINVPMTKLSGLKRYKISELKFFDRXXXXX 180
WSRIFSGGAAHADEKSSGDWDPHGLPANINVPMTKLSGLKRYKISELKFFDR
Sbjct: 121 GGFWSRIFSGGAAHADEKSSGDWDPHGLPANINVPMTKLSGLKRYKISELKFFDRAAGGG 180
Query: 181 XXFTGPEDSFFEMVTLQPGGVYTKSQLLKELETLVSCGMFERVDLEGKAKPDGTLGLTVS 240
FTGPEDSFFEMVTLQPGGVYTKSQLLKELETLVSCGMFERVDLEGKAKPDGTLGLTVS
Sbjct: 181 GAFTGPEDSFFEMVTLQPGGVYTKSQLLKELETLVSCGMFERVDLEGKAKPDGTLGLTVS 240
Query: 241 FVESVWSAAKQFKCINVGLMSQSGQVDFDQDMTEREKMDYLRKQERDYQQRVRGAKPCIL 300
FVESVWSAAKQFKCINVGLMSQSGQVDFDQDMTEREKMDYLRKQERDYQQRVRGAKPCIL
Sbjct: 241 FVESVWSAAKQFKCINVGLMSQSGQVDFDQDMTEREKMDYLRKQERDYQQRVRGAKPCIL 300
Query: 301 PDNVRGEVLGMMKKQEKVSARLLQRIRDHVQKWYHNEGFVCAQVVNFGNLNTSEVVCEVV 360
PDNVRGEVLGMMKKQEKVSARLLQRIRDHVQKWYHNEGFVCAQVVNFGNLNTSEVVCEVV
Sbjct: 301 PDNVRGEVLGMMKKQEKVSARLLQRIRDHVQKWYHNEGFVCAQVVNFGNLNTSEVVCEVV 360
Query: 361 EGDITKVEYQFQDKLGNFVEGNTQIPIIDRELPQQLRPGHIFNIGAGKQALKNINSLALF 420
EGDITKVEYQFQDKLGNFVEGNTQIPIIDRELPQQLRPGHIFNIGAGKQALKNINSLALF
Sbjct: 361 EGDITKVEYQFQDKLGNFVEGNTQIPIIDRELPQQLRPGHIFNIGAGKQALKNINSLALF 420
Query: 421 SNIEVNPRPDETKEGGIVVEIKLKELEPKSAEVSTEWSIVPGREGRPTLASIQPGGTVSF 480
SNIEVNPRPDETKEGGIVVEIKLKELEPKSAEVSTEWSIVPGREGRPTLASIQPGGTVSF
Sbjct: 421 SNIEVNPRPDETKEGGIVVEIKLKELEPKSAEVSTEWSIVPGREGRPTLASIQPGGTVSF 480
Query: 481 EHRNIYGLNRSIVGSVTSSNLLNPQDDLSFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRK 540
EHRNIYGLNRSIVGSVTSSNLLNPQDDLSFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRK
Sbjct: 481 EHRNIYGLNRSIVGSVTSSNLLNPQDDLSFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRK 540
Query: 541 LSPVFVAGPNMDEAPPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDETNSICTHG 600
LSPVFVAGPNMDEAPPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDETNSICTHG
Sbjct: 541 LSPVFVAGPNMDEAPPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDETNSICTHG 600
Query: 601 SRAMPSGGLSMDGPPTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGI 660
SRAMPSGGLSMDGPPTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGI
Sbjct: 601 SRAMPSGGLSMDGPPTTLSGTGIDRMAFLQANITRDNTEFVNGAVIGDRCIFQLDQGLGI 660
Query: 661 GSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPY 720
GSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPY
Sbjct: 661 GSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPY 720
Query: 721 SVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVG 780
SVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVG
Sbjct: 721 SVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVG 780
Query: 781 HGSSYGLGVKLGLVRGEYIVDHNAGTGTVFFRFGERF 817
HGSSYGLGVKLGLVRGEYIVDHNAGTGTVFFRFGERF
Sbjct: 781 HGSSYGLGVKLGLVRGEYIVDHNAGTGTVFFRFGERF 817
>Os11g0116500 Similar to Chloroplastic outer envelope membrane protein (OEP75)
precursor (Outer membrane protein)
Length = 660
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/553 (76%), Positives = 479/553 (86%), Gaps = 15/553 (2%)
Query: 280 YLRKQERD----------YQQRVRGAKPCILPDNVRGEVLGMMKKQEKVSARLLQRIRDH 329
Y R Q RD + KPC+LP+ ++ E+ GM+K+Q KVS+ LL+R+
Sbjct: 108 YTRAQLRDELDALATSGMFDHVTLQTKPCVLPEKLQRELQGMVKRQRKVSSGLLKRMAGR 167
Query: 330 VQKWYHNEGFVCAQVVNF-GNLNTSEVVCEVVEGDITKVEYQFQDKLGNFVEGNTQIPII 388
+++WYH+EGF CAQVV++ GNL+ EVVCEVVEGDITKVEYQF DKLGN V+GNT IP+I
Sbjct: 168 IERWYHDEGFHCAQVVSYHGNLDAGEVVCEVVEGDITKVEYQFLDKLGNVVDGNTSIPLI 227
Query: 389 DRELPQQLRPGHIFNIGAGKQALKNINSLALFSNIEVNPRPDETKEGGIVVEIKLKELEP 448
DRELPQQLRPGHI+N GAGKQALKNI+SL LFS IEV PRPDET +GG++V IKLKE +P
Sbjct: 228 DRELPQQLRPGHIYNNGAGKQALKNIDSLGLFSTIEVQPRPDETNQGGVIVAIKLKEHDP 287
Query: 449 KSAEVSTEWSIVPGREGRPTLASIQPGGTVSFEHRNIYGLNRSIVGSVTSSNLLNPQDDL 508
KSA+V T+WSIVPG +GRPTLASIQPGGTVSFEHRNI GL RS++GSVTSSNLLNP+DDL
Sbjct: 288 KSAQVITDWSIVPGSQGRPTLASIQPGGTVSFEHRNICGLKRSLIGSVTSSNLLNPEDDL 347
Query: 509 SFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRKLSPVFVAGPNMDEAPPVWVDRVGFKANI 568
SFKLEY HPYLDG+D+ ++NRTFK SCFN+RKLSP+FVAGPNM EAPP+WVDR+GFKANI
Sbjct: 348 SFKLEYAHPYLDGIDNLSRNRTFKISCFNSRKLSPIFVAGPNMYEAPPIWVDRIGFKANI 407
Query: 569 TESFTRQSKFTYGLVVEEITTRDETNSICTHGSRAMPSGGLSMDGPPTTLSGTGIDRMAF 628
TESFT+QSKFTYGL+VEEITTRDE N+ICTHGSR +PSG LSM GPPTTLSGTG+DRMAF
Sbjct: 408 TESFTKQSKFTYGLIVEEITTRDENNNICTHGSRQLPSGALSMIGPPTTLSGTGVDRMAF 467
Query: 629 LQANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFFNRHQLTLTKFVNLNKQEKGAG 688
LQANITRDNTEFVNGA IGDRCIFQ+DQGLGIGSKNPFFNRHQLT+TKF+NLNKQEKG+
Sbjct: 468 LQANITRDNTEFVNGATIGDRCIFQMDQGLGIGSKNPFFNRHQLTVTKFINLNKQEKGSR 527
Query: 689 KPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIPV- 747
KP PAVL LHG YAGCVGDLPSYDAF LGGP+SVRGYGMGELGASRN+LEVA+EL +P+
Sbjct: 528 KPPPAVLALHGRYAGCVGDLPSYDAFALGGPHSVRGYGMGELGASRNLLEVATELSVPIT 587
Query: 748 ---RNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVKLGLVRGEYIVDHNA 804
R+T VY F EHGTDLGSSKDV+GNPTEFFRRVGHGSSYG+GVKLG VR EY VDHNA
Sbjct: 588 VKNRHTQVYAFAEHGTDLGSSKDVEGNPTEFFRRVGHGSSYGVGVKLGAVRAEYAVDHNA 647
Query: 805 GTGTVFFRFGERF 817
GTG F RFGERF
Sbjct: 648 GTGAFFLRFGERF 660
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 125 SRIFSGGAAHADE-KSSGDWDPHGLPAN-INVPMTKLSGLKRYKISELKFFDRXXXXXXX 182
S FS GAA AD K S DWD HGL A+ + VP+++L G KRYK+S+L F +
Sbjct: 32 SGFFSAGAARADGGKPSPDWDAHGLAASALPVPLSRLDGKKRYKVSDLTFLNCRTRAAAA 91
Query: 183 FTGPEDSFFEMVTLQPGGVYTKSQLLKELETLVSCGMFERVDLEGK 228
F L+PGGVYT++QL EL+ L + GMF+ V L+ K
Sbjct: 92 AAAEAPLF---DALRPGGVYTRAQLRDELDALATSGMFDHVTLQTK 134
>Os02g0196300 Bacterial surface antigen (D15) family protein
Length = 513
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 198/471 (42%), Gaps = 70/471 (14%)
Query: 318 VSARLLQRIRDHVQKWYHNEGFVCAQVVNFGNLNTSEVV-CEVVEGDITKVEYQFQDK-L 375
++ R L ++ V WY G +V++ + + ++ +V E ++ + +F D+
Sbjct: 51 INIRHLDQVIKSVNGWYQERGLTG--LVSYAEILSGGILRLQVSEAEVNNINIRFLDRRT 108
Query: 376 GNFVEGNTQIPIIDRELPQQLRPGHIFNIGAGKQALKNINSLALFSNIEVNPRP--DETK 433
G G TQ I R L + G +N K+ ++ I ++ + ++ + P+P D K
Sbjct: 109 GEPTVGKTQPETILRHL--TTKKGQAYNRAQVKRDVETILTMGIMEDVTIIPQPVGDSNK 166
Query: 434 EGGIVVEIKLKELEPKSAEVSTEWSIVPGREGRPTLASIQPGGTVSFEHRNIYGLNRSIV 493
V++ + +E S S I G P I G+ ++ HRN++G N+ +
Sbjct: 167 -----VDLVMNLVERPSGGFSAGGGISSGITNGPLSGLI---GSFAYSHRNVFGRNKKL- 217
Query: 494 GSVTSSNLLNPQDDLSFKLEYVHPYLDGVDDRNKNRTFKTSCFNTRKLSPVFVAGPNMDE 553
+ +L Q D F+L Y P++DG + RT +T + + G + +
Sbjct: 218 ----NLSLERGQIDSIFRLNYTDPWIDG----DNKRTSRTIMVQNSRTPGTLIHGGDHPD 269
Query: 554 APPVWVDRVGFKANITESFTRQSKFTYGLVVEEITTRDET-NSICT--HGSRAMPSGGLS 610
P+ + RV + F + T GL+ + RD+ N I + S+ SG
Sbjct: 270 HGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAY 329
Query: 611 MDGPPTTLSGTGIDRMAFLQANIT----RDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPF 666
D TL +A L++ T R +T FV F ++QGL I +
Sbjct: 330 DD----TL-------LAKLESVYTDSGDRSSTMFV----------FNIEQGLPILPEWLS 368
Query: 667 FNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYG 726
FNR L + + PA L+L G+ ++AF +GG SVRGY
Sbjct: 369 FNRVTARLRQGYEIG----------PARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYE 418
Query: 727 MGELGASRNVL----EVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPT 773
G +G+ R+ EV+ + P+ F ++G+DL S V G+P
Sbjct: 419 EGAVGSGRSYAVGSGEVSCRMFGPLEGVV---FGDYGSDLSSGPKVPGDPA 466
>Os05g0510200 Similar to Glycine-rich cell wall structural protein 1.0 precursor
(GRP 1.0)
Length = 361
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 121/257 (47%), Gaps = 37/257 (14%)
Query: 563 GFKA-NITESFTRQ---SKFTYGLVVEEITTRDETN--SICTHGSRAMPSGGLSM----D 612
GF A N T S +R S+ + G+ + E +T + T+ S+ R + + G S+ D
Sbjct: 105 GFPADNFTRSGSRGINLSRLSLGVELNEPSTSNWTSGTSVKFEHIRPVNNEGRSIARDHD 164
Query: 613 GPPTTLSGTGIDRMAFLQ-----ANITRDNTEFVNGAVIGDRCIFQLDQGLGIGSKNPFF 667
G P T SG D M L+ A++ ++ VN Q++QGL + K+ F
Sbjct: 165 GFPLTCSGNLHDNMIILKQESGYADVNDNSFLKVN---------LQMEQGLPLVPKSLTF 215
Query: 668 NRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGM 727
NR + ++K + L P LV VGD+ Y AF +GG SVRGYG
Sbjct: 216 NRVKCAVSKGMKLG----------PTFLVTSLTGGSIVGDMAPYQAFAIGGLGSVRGYGE 265
Query: 728 GELGASRNVLEVASELRIPVRNTYVYG--FVEHGTDLGSSKDVKGNPTEFFRRVGHGSSY 785
G +GA R L E +P+ ++ G F++ G+DLGS+ V GNP + G G +
Sbjct: 266 GAVGAGRLCLIANCEYTVPLAK-HLEGSIFMDCGSDLGSACHVPGNPALRQGKPGFGVGF 324
Query: 786 GLGVKLGLVRGEYIVDH 802
G G+ G+ VD+
Sbjct: 325 GYGIHFNTDLGQIRVDY 341
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 25,717,784
Number of extensions: 1101066
Number of successful extensions: 2106
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2097
Number of HSP's successfully gapped: 5
Length of query: 817
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 708
Effective length of database: 11,344,475
Effective search space: 8031888300
Effective search space used: 8031888300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)