Os11g0116500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein).
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Os11g0116500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.08 | 0.37 | 5.96 | -1.65 | 0.335 | -0.427 | -0.462 | 0.0144 | -0.463 | 16.3 | 20 | 233 | -- | -- |
| 62.09 | 0.367 | 5.96 | -1.65 | 0.335 | -0.429 | -0.456 | -- | -0.463 | 16.3 | 20.06 | 232 | -- | -- |
| 62.59 | 0.368 | 5.97 | -1.68 | 0.335 | -0.445 | -- | -0.131 | -0.471 | 16.3 | 20 | 230 | -- | -- |
| 62.65 | 0.369 | 5.96 | -1.66 | 0.332 | -0.431 | -- | -- | -0.465 | 16.2 | 20.01 | 229 | -- | -- |
| 66.58 | 0.38 | 5.96 | -1.67 | -- | -0.506 | -- | -0.297 | -0.456 | -- | 20.5 | 1226 | -- | -- |
| 67.69 | 0.386 | 5.98 | -1.79 | 0.269 | -- | -0.506 | -- | -0.539 | 16.7 | -- | -- | -- | -- |
| 68.36 | 0.387 | 5.98 | -1.79 | 0.266 | -- | -- | -- | -0.542 | 16.6 | -- | -- | -- | -- |
| 66.67 | 0.38 | 5.95 | -1.61 | -- | -0.473 | -- | -- | -0.44 | -- | 20.53 | 1233 | -- | -- |
| 71.85 | 0.395 | 5.86 | -- | 0.254 | -1.43 | -- | -- | 0.00399 | 16.8 | 18.4 | 47520 | -- | -- |
| 72.11 | 0.397 | 5.98 | -1.8 | -- | -- | -- | -- | -0.549 | -- | -- | -- | -- | -- |
| 153.23 | 0.579 | 5.93 | -- | 0.299 | -- | -- | -- | -0.342 | 16.4 | -- | -- | -- | -- |
| 75.28 | 0.404 | 5.85 | -- | -- | -1.44 | -- | -- | -0.0031 | -- | 18.42 | 47520 | -- | -- |
| 158.03 | 0.587 | 5.93 | -- | -- | -- | -- | -- | -0.349 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.22 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 6 | 60.50 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 7 | 60.52 | temperature | 10 | 90 | > th | dose dependent | sin | 7 | NA |
| 12 | 60.60 | temperature | 15 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 20 | 60.76 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 27 | 60.92 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 11 |
| 34 | 61.08 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 35 | 61.11 | temperature | 20 | 270 | < th | dose independent | sin | 9 | NA |
| 40 | 61.13 | temperature | 20 | 720 | < th | dose independent | rect. | 20 | 6 |
| 41 | 61.13 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 7 |
| 45 | 61.16 | temperature | 20 | 270 | > th | dose independent | sin | 9 | NA |
| 48 | 61.17 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 12 |
| 52 | 61.20 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 10 |
| 57 | 61.24 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 22 |
| 75 | 61.35 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 13 |
| 76 | 61.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 7 |
| 85 | 61.39 | temperature | 20 | 270 | < th | dose independent | rect. | 19 | 14 |
| 88 | 61.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 105 | 61.44 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 16 |
| 137 | 61.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 140 | 61.53 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 12 |
| 182 | 61.64 | temperature | 20 | 720 | < th | dose independent | sin | 14 | NA |
| 190 | 61.64 | atmosphere | 1015 | 30 | < th | dose dependent | rect. | 8 | 21 |
| 230 | 61.73 | temperature | 20 | 30 | > th | dose independent | rect. | 8 | 21 |
| 233 | 61.73 | temperature | 15 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 235 | 61.74 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 14 |
| 253 | 61.78 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 21 |
| 254 | 61.78 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 268 | 61.82 | temperature | 20 | 720 | > th | dose independent | sin | 13 | NA |
| 302 | 61.88 | temperature | 25 | 720 | < th | dose dependent | sin | 13 | NA |
| 312 | 61.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 10 |
| 317 | 61.90 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 23 |
| 323 | 61.91 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 8 |
| 339 | 61.92 | temperature | 15 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 351 | 61.94 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 18 |
| 427 | 62.04 | temperature | 30 | 30 | < th | dose independent | rect. | 5 | 10 |
| 442 | 62.05 | wind | 3 | 30 | < th | dose dependent | rect. | 11 | 18 |
| 448 | 62.06 | temperature | 20 | 270 | < th | dose independent | rect. | 24 | 23 |
| 458 | 62.07 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 23 |
| 469 | 62.08 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 498 | 62.12 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 15 |
| 508 | 62.13 | temperature | 15 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 529 | 62.16 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 534 | 62.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 548 | 62.18 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 574 | 62.21 | temperature | 30 | 30 | < th | dose independent | rect. | 5 | 12 |
| 618 | 62.25 | temperature | 20 | 10 | > th | dose independent | rect. | 2 | 3 |
| 640 | 62.27 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 7 |
| 642 | 62.27 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 17 |
| 653 | 62.27 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 681 | 62.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 5 |
| 687 | 62.30 | atmosphere | 1015 | 30 | < th | dose dependent | rect. | 11 | 18 |
| 699 | 62.31 | wind | 3 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 705 | 62.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 12 |
| 707 | 62.32 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 746 | 62.35 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 782 | 62.38 | wind | 9 | 10 | < th | dose dependent | rect. | 15 | 14 |
| 829 | 62.41 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 5 | 14 |
| 839 | 62.42 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 864 | 62.44 | temperature | 30 | 30 | < th | dose independent | rect. | 5 | 14 |
| 880 | 62.45 | temperature | 15 | 30 | > th | dose dependent | rect. | 21 | 8 |
| 898 | 62.47 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 3 |
| 900 | 62.47 | temperature | 20 | 270 | < th | dose independent | rect. | 3 | 5 |
| 920 | 62.48 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 7 |
| 926 | 62.48 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 4 |