Os03g0271200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein).
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Os03g0271200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chloroplastic outer envelope membrane protein (OEP75) precursor (Outer membrane protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.71 | 0.452 | 10.1 | 1.4 | 2.05 | 0.826 | 0.474 | 0.178 | -0.0654 | 17.8 | 25.5 | 10 | -- | -- |
| 92.69 | 0.448 | 10.1 | 1.38 | 2.05 | 0.84 | 0.492 | -- | -0.0681 | 17.8 | 25.5 | 7 | -- | -- |
| 93.19 | 0.45 | 10.1 | 1.41 | 2.05 | 0.83 | -- | 0.479 | -0.0567 | 17.8 | 25.5 | 7 | -- | -- |
| 93.27 | 0.45 | 10.1 | 1.37 | 2.05 | 0.873 | -- | -- | -0.0688 | 17.8 | 25.5 | 7 | -- | -- |
| 232.21 | 0.71 | 10.1 | 1.19 | -- | 2.27 | -- | -0.277 | -0.259 | -- | 24.37 | 266 | -- | -- |
| 102.94 | 0.476 | 10.1 | 1.5 | 2.28 | -- | 0.813 | -- | -0.0216 | 17.4 | -- | -- | -- | -- |
| 104.57 | 0.479 | 10.1 | 1.5 | 2.29 | -- | -- | -- | -0.018 | 17.4 | -- | -- | -- | -- |
| 231.68 | 0.709 | 10.1 | 1.05 | -- | 2.28 | -- | -- | -0.29 | -- | 24.4 | 253 | -- | -- |
| 140.76 | 0.553 | 10.1 | -- | 1.93 | 1.21 | -- | -- | -0.243 | 18 | 25.4 | 15 | -- | -- |
| 377.53 | 0.908 | 10.1 | 1.42 | -- | -- | -- | -- | -0.0743 | -- | -- | -- | -- | -- |
| 163.64 | 0.598 | 10.1 | -- | 2.26 | -- | -- | -- | -0.185 | 17.5 | -- | -- | -- | -- |
| 260.44 | 0.752 | 10.1 | -- | -- | 2.43 | -- | -- | -0.419 | -- | 24.3 | 253 | -- | -- |
| 430.73 | 0.969 | 10.1 | -- | -- | -- | -- | -- | -0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.29 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 4 | 84.85 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 17 | 85.87 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 12 |
| 33 | 86.33 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 18 |
| 40 | 86.46 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 45 | 86.55 | temperature | 25.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 55 | 86.75 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 62 | 86.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 81 | 87.27 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 106 | 87.55 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 132 | 87.80 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 148 | 87.97 | temperature | 30.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 153 | 88.03 | temperature | 15.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 160 | 88.10 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 180 | 88.29 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 13 |
| 221 | 88.55 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 228 | 88.63 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 237 | 88.68 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 2 |
| 257 | 88.80 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 18 |
| 293 | 88.98 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 10 |
| 318 | 89.09 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 473 | 89.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 474 | 89.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 491 | 89.79 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 6 |
| 508 | 89.85 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 518 | 89.90 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 19 |
| 554 | 90.06 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 606 | 90.26 | temperature | 25.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 607 | 90.26 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 615 | 90.29 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 652 | 90.38 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 665 | 90.40 | radiation | 40.0 | 270 | < th | dose independent | rect. | 9 | 22 |
| 675 | 90.42 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 710 | 90.52 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 18 |
| 734 | 90.60 | temperature | 25.0 | 270 | > th | dose independent | sin | 4 | NA |
| 765 | 90.70 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 20 |
| 821 | 90.84 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 6 |
| 839 | 90.90 | temperature | 25.0 | 270 | < th | dose independent | sin | 4 | NA |
| 858 | 90.94 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 863 | 90.96 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 868 | 90.98 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 873 | 90.98 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 885 | 91.01 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 890 | 91.02 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 900 | 91.04 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 902 | 91.05 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 12 |
| 909 | 91.06 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 914 | 91.08 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 22 | 6 |
| 921 | 91.09 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 939 | 91.12 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 942 | 91.13 | radiation | 40.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 954 | 91.15 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 957 | 91.15 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 963 | 91.17 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 15 |
| 982 | 91.23 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 12 |