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Os05g0510200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glycine-rich cell wall structural protein 1.0 precursor (GRP 1.0).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.57 (0.0166) R2 : 0.0108
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0781 (0.0349) R2dN8 : 0.014 R2N8 : 0.0108
σ : 0.313
deviance : 44.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.01 0.215 9.59 -0.473 0.628 0.313 0.345 -0.251 -0.0652 19.2 87.3 129 -- --
21.18 0.214 9.59 -0.483 0.632 0.314 0.402 -- -0.0649 19.1 87.61 129 -- --
21.3 0.215 9.59 -0.475 0.624 0.302 -- -0.305 -0.0635 19.2 86.95 128 -- --
21.59 0.216 9.59 -0.491 0.622 0.287 -- -- -0.071 19.2 87 122 -- --
38.62 0.289 9.57 -0.457 -- 0.194 -- -0.15 -0.0895 -- 87.44 1501 -- --
23.63 0.228 9.6 -0.453 0.529 -- 0.242 -- -0.123 20.1 -- -- -- --
23.8 0.228 9.6 -0.46 0.528 -- -- -- -0.123 20.1 -- -- -- --
38.55 0.289 9.58 -0.488 -- 0.175 -- -- -0.0898 -- 91.35 1531 -- --
27.86 0.246 9.58 -- 0.606 0.238 -- -- -0.0267 19.3 87.11 117 -- --
39.14 0.292 9.58 -0.465 -- -- -- -- -0.13 -- -- -- -- --
29.38 0.254 9.59 -- 0.531 -- -- -- -0.072 20.1 -- -- -- --
36.47 0.281 9.58 -- -- -0.512 -- -- -0.116 -- 68.99 626 -- --
44.83 0.313 9.57 -- -- -- -- -- -0.0781 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.48 temperature 15.0 270 > th dose independent rect. 6 17
4 17.62 temperature 15.0 270 > th dose independent rect. 5 8
6 17.70 temperature 15.0 270 > th dose independent rect. 19 16
9 17.76 wind 7.0 270 < th dose independent rect. 13 16
11 17.79 radiation 1.0 270 > th dose independent rect. 18 19
12 17.80 radiation 1.0 270 < th dose dependent sin 5 NA
15 17.86 humidity 50.0 270 > th dose independent rect. 5 8
16 17.86 temperature 15.0 270 > th dose independent rect. 5 20
17 17.90 radiation 1.0 270 > th dose independent rect. 5 8
31 17.94 wind 1.0 270 > th dose independent rect. 17 8
46 17.99 temperature 15.0 270 > th dose independent rect. 17 8
50 18.04 radiation 1.0 270 < th dose independent sin 6 NA
51 18.05 radiation 1.0 270 > th dose independent sin 5 NA
53 18.06 temperature 10.0 270 > th dose dependent rect. 19 16
56 18.09 precipitation 0.1 270 < th dose independent rect. 5 8
57 18.09 precipitation 0.1 270 < th dose dependent rect. 5 8
61 18.13 wind 9.0 270 < th dose independent rect. 5 8
63 18.13 atmosphere 995.0 270 > th dose independent rect. 5 8
64 18.13 atmosphere 1015.0 270 < th dose independent rect. 5 8
65 18.13 temperature 10.0 270 > th dose independent rect. 13 16
67 18.14 wind 1.0 270 > th dose independent rect. 7 16
69 18.16 wind 5.0 270 < th dose independent rect. 23 7
70 18.16 temperature 10.0 270 > th dose dependent rect. 5 7
72 18.18 radiation 1.0 270 < th dose dependent rect. 1 10
74 18.19 wind 1.0 270 > th dose independent rect. 6 18
76 18.19 wind 9.0 270 < th dose dependent rect. 13 17
81 18.21 temperature 10.0 270 > th dose dependent rect. 18 7
90 18.27 wind 7.0 270 < th dose independent rect. 1 16
95 18.32 humidity 90.0 90 < th dose independent rect. 6 7
113 18.36 radiation 1.0 270 < th dose independent rect. 1 10
133 18.39 wind 9.0 270 < th dose dependent rect. 23 7
134 18.40 atmosphere 995.0 270 > th dose independent rect. 17 8
139 18.41 humidity 50.0 270 > th dose independent rect. 19 16
144 18.42 radiation 20.0 270 < th dose dependent rect. 23 8
152 18.44 radiation 20.0 270 < th dose independent rect. 17 8
156 18.44 temperature 10.0 270 > th dose independent rect. 1 16
157 18.44 atmosphere 1015.0 270 < th dose independent rect. 1 16
170 18.46 wind 7.0 270 < th dose independent rect. 11 8
171 18.46 precipitation 0.1 270 < th dose independent rect. 17 8
174 18.46 precipitation 0.1 270 < th dose dependent rect. 17 8
182 18.49 wind 1.0 270 > th dose independent rect. 5 8
192 18.49 wind 9.0 270 < th dose dependent rect. 1 16
196 18.50 precipitation 0.1 270 < th dose independent rect. 19 16
198 18.50 precipitation 0.1 270 < th dose dependent rect. 19 16
199 18.51 wind 9.0 270 < th dose independent rect. 17 8
203 18.51 radiation 40.0 270 < th dose dependent rect. 17 8
214 18.54 precipitation 0.1 270 < th dose independent rect. 6 17
217 18.54 precipitation 0.1 270 < th dose dependent rect. 6 17
219 18.55 precipitation 0.1 270 < th dose independent rect. 13 16
226 18.55 precipitation 0.1 270 < th dose dependent rect. 13 16
229 18.56 humidity 50.0 270 > th dose independent rect. 17 8
238 18.57 temperature 10.0 270 > th dose independent rect. 23 7
239 18.57 temperature 30.0 270 < th dose independent rect. 23 7
240 18.57 humidity 50.0 270 > th dose independent rect. 23 7
243 18.57 atmosphere 995.0 270 > th dose independent rect. 23 7
244 18.57 radiation 20.0 270 < th dose independent rect. 23 7
247 18.57 temperature 10.0 270 > th dose independent rect. 11 8
248 18.57 atmosphere 1015.0 270 < th dose independent rect. 11 8
252 18.57 atmosphere 995.0 270 > th dose independent rect. 19 16
257 18.58 atmosphere 995.0 270 > th dose independent rect. 6 17
262 18.59 wind 9.0 270 < th dose independent rect. 19 16
279 18.61 atmosphere 1015.0 270 < th dose independent rect. 6 17
288 18.63 wind 5.0 270 < th dose independent rect. 1 4
334 18.67 atmosphere 1015.0 270 < th dose independent rect. 24 6
337 18.67 precipitation 0.1 270 < th dose independent rect. 1 16
340 18.67 precipitation 0.1 270 < th dose dependent rect. 1 16
342 18.68 precipitation 0.1 270 < th dose independent rect. 23 7
346 18.68 humidity 50.0 270 > th dose dependent rect. 23 7
347 18.68 precipitation 0.1 270 < th dose dependent rect. 23 7
357 18.70 precipitation 0.1 270 < th dose independent rect. 11 8
361 18.70 precipitation 0.1 270 < th dose dependent rect. 11 8
415 18.77 wind 9.0 270 < th dose independent rect. 6 17
473 18.82 humidity 90.0 10 < th dose independent rect. 7 7
486 18.83 wind 9.0 270 < th dose dependent rect. 11 8
505 18.85 atmosphere 1015.0 270 < th dose independent rect. 19 16
537 18.88 wind 9.0 270 < th dose dependent rect. 1 4
546 18.89 atmosphere 995.0 270 > th dose independent rect. 5 20
554 18.90 atmosphere 1015.0 270 < th dose independent rect. 17 8
555 18.90 wind 1.0 270 > th dose independent rect. 18 17
556 18.90 precipitation 0.1 270 < th dose independent rect. 5 20
560 18.90 precipitation 0.1 270 < th dose dependent rect. 5 20
562 18.91 temperature 10.0 270 > th dose independent rect. 1 4
565 18.91 temperature 30.0 270 < th dose independent rect. 1 4
566 18.91 humidity 50.0 270 > th dose independent rect. 1 4
569 18.91 atmosphere 995.0 270 > th dose independent rect. 1 4
570 18.91 atmosphere 1010.0 270 < th dose independent rect. 1 4
572 18.91 radiation 20.0 270 < th dose independent rect. 1 4
586 18.91 radiation 30.0 270 < th dose dependent rect. 1 4
596 18.92 humidity 90.0 90 < th dose independent rect. 19 18
721 19.01 precipitation 0.1 270 < th dose independent rect. 1 4
725 19.01 precipitation 0.1 270 < th dose dependent rect. 1 4
754 19.04 humidity 50.0 270 > th dose dependent rect. 1 4
773 19.06 wind 7.0 90 < th dose independent rect. 3 16
806 19.08 atmosphere 995.0 270 > th dose independent rect. 1 16
839 19.10 atmosphere 995.0 270 > th dose independent rect. 13 16
840 19.10 wind 9.0 270 < th dose independent rect. 5 20
851 19.11 humidity 50.0 270 > th dose independent rect. 13 16
859 19.12 wind 1.0 270 > th dose independent rect. 1 4
881 19.13 temperature 15.0 10 > th dose independent rect. 8 17
884 19.13 humidity 50.0 270 > th dose independent rect. 6 18
886 19.13 atmosphere 1015.0 270 < th dose independent rect. 5 20
889 19.13 temperature 10.0 10 > th dose dependent rect. 7 7
891 19.13 wind 9.0 90 < th dose dependent rect. 3 16
942 19.15 temperature 10.0 270 > th dose dependent rect. 11 7
954 19.16 temperature 30.0 90 < th dose independent rect. 19 8
966 19.16 temperature 10.0 90 > th dose independent rect. 3 16
967 19.16 atmosphere 1015.0 90 < th dose independent rect. 3 16
997 19.17 atmosphere 995.0 270 > th dose dependent rect. 24 6