BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0177400 Os03g0177400|AK119528
(447 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0177400 EF-1 alpha 902 0.0
AK061009 712 0.0
AK108309 690 0.0
AK069160 474 e-134
AK110735 456 e-128
AK108374 396 e-110
AK110624 326 2e-89
Os04g0677800 Zinc finger, RanBP2-type domain containing pro... 290 2e-78
Os01g0116600 Zinc finger, RanBP2-type domain containing pro... 284 9e-77
Os04g0595300 Zinc finger, RanBP2-type domain containing pro... 283 1e-76
Os04g0270100 Similar to G1 to S phase transition protein 1 ... 276 2e-74
AK110320 245 6e-65
AK108986 239 2e-63
Os02g0456200 Similar to G1 to S phase transition protein 1 ... 213 3e-55
Os03g0851100 Similar to Translational elongation factor EF-TuM 162 3e-40
Os02g0595700 Chloroplast translational elongation factor Tu 155 5e-38
D10400 86 4e-17
Os02g0456500 66 5e-11
>Os03g0177400 EF-1 alpha
Length = 447
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/436 (100%), Positives = 436/436 (100%)
Query: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 241 VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
Sbjct: 301 KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
Query: 361 AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT 420
AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
Sbjct: 361 AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT 420
Query: 421 VAVGVIKNVEKKDPTG 436
VAVGVIKNVEKKDPTG
Sbjct: 421 VAVGVIKNVEKKDPTG 436
>AK061009
Length = 450
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/435 (77%), Positives = 383/435 (88%)
Query: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGK+K H+++VVIGHVD+GKST TGHLIYK GGIDKR IE+FEKEA+EM K SFKYAWVL
Sbjct: 1 MGKDKQHLSLVVIGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEASEMGKASFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFE+ K T+IDAPGHRDFIKNMITGTSQAD AVL+I S
Sbjct: 61 DKLKAERERGITIDIALWKFESPKSVFTIIDAPGHRDFIKNMITGTSQADAAVLMIASPQ 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
G FEAGISKDGQTREHALLAFTLGVKQMI C NKMD T YS+ARY+EI KEV SYLKK
Sbjct: 121 GEFEAGISKDGQTREHALLAFTLGVKQMIVCTNKMDDKTVNYSEARYEEIKKEVGSYLKK 180
Query: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240
VGYN DK+ FVPISG+ GDNMIE+S N+ WYKGPTLLEALD + P RP DKPLRLPLQD
Sbjct: 181 VGYNVDKVRFVPISGWAGDNMIEKSDNMPWYKGPTLLEALDLLEPPSRPVDKPLRLPLQD 240
Query: 241 VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
VYKIGGIGTVPVGRVETGV+KPG VVTF PSG+TTEVKS+EMHHEAL EA+PGDNVGFNV
Sbjct: 241 VYKIGGIGTVPVGRVETGVMKPGDVVTFAPSGVTTEVKSIEMHHEALPEAVPGDNVGFNV 300
Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
KN++VKD++RG+V SN+K+DPAKE +F +QVI++NHPGQI NGYAPVLDCHT HIA KF
Sbjct: 301 KNISVKDIRRGFVCSNTKNDPAKECETFQAQVIVLNHPGQITNGYAPVLDCHTCHIACKF 360
Query: 361 AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT 420
L +KIDRRSGKE+EKEPK +K+GDA +V M+P+KPM VETF++YPPLGRFAVRDMRQT
Sbjct: 361 GTLESKIDRRSGKEIEKEPKAIKSGDAAIVTMVPSKPMCVETFTDYPPLGRFAVRDMRQT 420
Query: 421 VAVGVIKNVEKKDPT 435
VAVG+IK+V KK+ T
Sbjct: 421 VAVGIIKSVAKKEAT 435
>AK108309
Length = 460
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/446 (74%), Positives = 377/446 (84%), Gaps = 13/446 (2%)
Query: 2 GKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLD 61
G+ HIN+VVIGHVDS KSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLD
Sbjct: 3 GRIIAHINVVVIGHVDSSKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLD 62
Query: 62 KLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
KLK+ERERGITIDIALWKFET KY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG
Sbjct: 63 KLKSERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTG 122
Query: 122 GFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV 181
FEAGISKDGQTREHALLA+TLGVKQ+I NKMD T K+S+ARY EI+KE S ++KKV
Sbjct: 123 EFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTT--KWSEARYQEIIKETSGFIKKV 180
Query: 182 GYNPDKIPFVPISGFEGDNMIERSTNLDWYKG-----------PTLLEALDQINEPKRPS 230
G+NP +PFVPISGF GDNMI+ STN WYKG TLLEA+D I+ P RP+
Sbjct: 181 GFNPKHVPFVPISGFNGDNMIDVSTNCPWYKGWEKETKAKATGKTLLEAIDAIDSPTRPT 240
Query: 231 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEA 290
DKPLRLPLQDVYKIGGIGTVPVGRVETGV+K GMVVTF P+G+TTEVKSVEMHHE L E
Sbjct: 241 DKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPAGVTTEVKSVEMHHEQLPEG 300
Query: 291 LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLD 350
LPGDNVGFNVKNV+VK+++RG VA +SK DP K SF +QVI++NHPGQ+G GYAPVLD
Sbjct: 301 LPGDNVGFNVKNVSVKEIRRGNVAGDSKTDPPKGCDSFNAQVIVLNHPGQVGAGYAPVLD 360
Query: 351 CHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLG 410
CHT+HIA KF+EL+ KIDRRSGK +E PKF+K+GDA +VKM+P+KPM VE F++YPPLG
Sbjct: 361 CHTAHIACKFSELLEKIDRRSGKSIESGPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLG 420
Query: 411 RFAVRDMRQTVAVGVIKNVEKKDPTG 436
RFAVRDMRQTVAVGVIK+VEK D G
Sbjct: 421 RFAVRDMRQTVAVGVIKSVEKSDKAG 446
>AK069160
Length = 300
Score = 474 bits (1220), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/300 (77%), Positives = 254/300 (84%), Gaps = 12/300 (4%)
Query: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
DKLKAERERGITIDIALWKFET KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P +S+AR++EI KEVSSY+KK
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPFSEARFEEIKKEVSSYIKK 180
Query: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKR 228
+GYNP + FVPISG+ GDNM+E S + W+K G L+EALD I P R
Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEPSDKMPWFKGWNVERKEGKAEGKCLIEALDAILPPSR 240
Query: 229 PSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQ 288
P+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG VVTF P+ +TTEVKSVEMHHEAL
Sbjct: 241 PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTVVTFAPANITTEVKSVEMHHEALS 300
>AK110735
Length = 330
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/320 (68%), Positives = 262/320 (81%), Gaps = 14/320 (4%)
Query: 129 KDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKI 188
KDGQTRE ALLA+TLGV+Q+I NKMD+ K+ K R++EI+KE S+++KKVGYNP +
Sbjct: 1 KDGQTREPALLAYTLGVRQLIVAVNKMDSV--KWDKNRFEEIIKETSNFVKKVGYNPKTV 58
Query: 189 PFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRL 236
PFVPISG+ GDNMIE STN WYKG TLLEA+D I P+RP+DKPLRL
Sbjct: 59 PFVPISGWNGDNMIEASTNCPWYKGWEKETKAGKSTGKTLLEAIDAIEPPQRPTDKPLRL 118
Query: 237 PLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 296
PLQDVYKIGGIGTVPVGRVETG++K GMVVTF P+G+TTEVKSVEMHHE L E +PGDNV
Sbjct: 119 PLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPAGVTTEVKSVEMHHEQLVEGVPGDNV 178
Query: 297 GFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHI 356
GFNVKNV+VK+++RG V +SK+DP K SFT+QVI++NHPGQI GY+PVLDCHT+HI
Sbjct: 179 GFNVKNVSVKEIRRGNVCGDSKNDPPKGCDSFTAQVIVLNHPGQISAGYSPVLDCHTAHI 238
Query: 357 AVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRD 416
A KF L+ KIDRR+GK++E PKF+K+GDA +VKM+P+KPM VE F++YPPLGRFAVRD
Sbjct: 239 ACKFDTLLEKIDRRTGKKMEDNPKFVKSGDASIVKMVPSKPMCVEAFTDYPPLGRFAVRD 298
Query: 417 MRQTVAVGVIKNVEKKDPTG 436
MRQTVAVGVIK+VEK D G
Sbjct: 299 MRQTVAVGVIKSVEKSDKAG 318
>AK108374
Length = 276
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/262 (69%), Positives = 223/262 (85%)
Query: 172 KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSD 231
KEV +++KK+GYNP +PFVPISG+ GDNM+E+S + W+KGPTL++ALD + P RP +
Sbjct: 1 KEVQNFVKKIGYNPANVPFVPISGWNGDNMLEKSDKMPWWKGPTLIDALDAMPPPVRPVE 60
Query: 232 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEAL 291
KPLR+PLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P LTTEVKSVEMHHE LQ A+
Sbjct: 61 KPLRIPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNLTTEVKSVEMHHEQLQSAV 120
Query: 292 PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDC 351
PGDNVGFNVKNV++KD++RG VAS+S +DPA E F +QVII+NHPGQI GY+PV+DC
Sbjct: 121 PGDNVGFNVKNVSIKDIRRGNVASDSTNDPAFECEFFNAQVIILNHPGQIHAGYSPVVDC 180
Query: 352 HTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGR 411
HT+HIA ++ E+V+KIDRR+GK +E+ PKF+K+G+A MV M P KP+ VETF+ Y PLGR
Sbjct: 181 HTAHIACRWKEIVSKIDRRTGKVIEETPKFVKSGEAAMVNMYPQKPLCVETFANYAPLGR 240
Query: 412 FAVRDMRQTVAVGVIKNVEKKD 433
FAVRDMRQTVAVGVIK V KK+
Sbjct: 241 FAVRDMRQTVAVGVIKAVTKKE 262
>AK110624
Length = 463
Score = 326 bits (835), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/464 (40%), Positives = 273/464 (58%), Gaps = 33/464 (7%)
Query: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
M + K H++IV+ GHVDSGKSTTTG L+++LGGI +R +E+ ++EAA + K+SF +A+ +
Sbjct: 1 MAEGKEHLSIVICGHVDSGKSTTTGRLLFELGGIPERELEKLKEEAAALGKQSFAFAFYM 60
Query: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
D+ K ERERG+TI +F T K++ T+IDAPGHRDFIKNMI+G +QAD +L++ +
Sbjct: 61 DRQKEERERGVTIACTTKEFFTDKWHYTIIDAPGHRDFIKNMISGAAQADVCLLMVPA-D 119
Query: 121 GGFEAGISK--------DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK 172
G F I K GQTR+HA L LGVKQ+IC NKMD+ Y + RY EI
Sbjct: 120 GNFTTAIQKGDHKAAEIQGQTRQHARLINLLGVKQLICGVNKMDSDVAGYKEERYVEIRD 179
Query: 173 EVSSYLKKVGYNPD----KIPFVPISGFEGDNMIERSTNLDWYKG-------------PT 215
E+ L +VG+ D +P +PISG+ GDN+I++S N+ W+ G T
Sbjct: 180 EMKHMLTRVGWKADFVEKSVPIIPISGWMGDNLIKKSENMKWWNGMDVTGLNKEKVHIET 239
Query: 216 LLEAL-DQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT 274
LL AL D + P+R +D P+R+P+ YKI G+G V GRVE GV+KPG V F P+
Sbjct: 240 LLNALNDMVIVPERKTDAPMRVPISGAYKIKGVGDVLAGRVEQGVVKPGDEVIFLPTHTA 299
Query: 275 T-----EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKR-GYVASNSKDDPAKEAASF 328
+V +VEMHH+ + +A PGDNVG N+K + ++ R G V D K +F
Sbjct: 300 ANPCVGKVFTVEMHHKRVDKAGPGDNVGMNIKGLDKGNMPRTGDVMILKSDQTLKPCQNF 359
Query: 329 TSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAG 388
T+Q+ ++ PG++ GY+P+ A K E+ K+ + +G + +EP LK +
Sbjct: 360 TAQIQTLDIPGEVKKGYSPIGFVRCGRAACKITEIKWKVGKETGNKKLEEPHGLKANEMA 419
Query: 389 MVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKK 432
V P +P+VV++F L R A D V +G + V K
Sbjct: 420 EVVFEPCQPLVVDSFKSCEGLSRIAFLDGNTAVMLGKVVAVTHK 463
>Os04g0677800 Zinc finger, RanBP2-type domain containing protein
Length = 682
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 253/432 (58%), Gaps = 9/432 (2%)
Query: 7 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAE 66
+N+ ++GHVDSGKST G L++ LG I K+ + ++EKEA E K SF YAW +D+ E
Sbjct: 253 QLNLAIVGHVDSGKSTLCGRLLHALGRISKKQMHKYEKEAKEKGKGSFAYAWAMDESADE 312
Query: 67 RERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEA- 125
RERGIT+ + + F+T Y+ ++D+PGH+DF+ NMI+G +Q+D A+L+ID++ G FEA
Sbjct: 313 RERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAG 372
Query: 126 -GISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYN 184
GI+ GQT+EH+ L + GV +I NKMD+ +YSK R++ I ++ ++L+ GY
Sbjct: 373 MGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSV--EYSKERFNFIKSQLGAFLRSCGYK 430
Query: 185 PDKIPFVPISGFEGDNMIERSTNL---DWYKGPTLLEALDQINEPKRPSDKPLRLPLQDV 241
+ +VPIS E +N++ +++ WY G LL+A+D + P R KPLRLP+ DV
Sbjct: 431 DSAVAWVPISAMENENLMTTASDTRLSSWYDGNCLLKAIDTLPPPSRDVSKPLRLPICDV 490
Query: 242 YKIGGIGTVPV-GRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV 300
+ +G V + G+VE G + G + P G VK++E + + A GDNV +
Sbjct: 491 FSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAVVKTIERNSSSCNLARAGDNVAIGL 550
Query: 301 KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF 360
+ + + G V + D P A+ ++++++ I G L H + ++
Sbjct: 551 QGIDPSHIMPGGVICHP-DYPVSVASCLELKILVLDITVPILVGLQFELHIHHAKVSASM 609
Query: 361 AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT 420
++++ +++++GK +K P+FL + ++++ K + VE FS LGR +R T
Sbjct: 610 VKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLRSQGNT 669
Query: 421 VAVGVIKNVEKK 432
+AVG++ V ++
Sbjct: 670 IAVGIVSRVREQ 681
>Os01g0116600 Zinc finger, RanBP2-type domain containing protein
Length = 655
Score = 284 bits (727), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 250/437 (57%), Gaps = 13/437 (2%)
Query: 6 THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKA 65
+ +N+ ++GHVDSGKST +G L++ LG I K+ + + EKEA E K SF YAW +D+
Sbjct: 221 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 280
Query: 66 ERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEA 125
ERERG+T+ +A+ ET KY ++D+PGH+DF+ NMI+G +QAD A+L++D+ TG FEA
Sbjct: 281 ERERGVTMTVAVAYLETNKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEA 340
Query: 126 GISKD-----GQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
G+ + GQT+EHA L + GV+Q+I NKMDA YSK R++ I ++ S+L+
Sbjct: 341 GMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAI--GYSKERFEFIKVQLGSFLRA 398
Query: 181 VGYNPDKIPFVPISGFEGDNMIERSTNL---DWYKGPTLLEALDQINEPKRPSDKPLRLP 237
+ + ++P+S E N+I+ +++ WY+G LL+A+D + P R KPL LP
Sbjct: 399 CNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGFCLLDAIDSLQLPSRDVSKPLILP 458
Query: 238 LQDVYKIGGIGTVPV-GRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 296
+ DV K G + G++ETG ++ G V P G VKS+E + A GDNV
Sbjct: 459 ICDVIKSQSTGQLAAFGKLETGAIRIGSKVLISPCGEVATVKSIERDSNSCDIARAGDNV 518
Query: 297 GFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHI 356
+++ + L G + N P + +V++++ I GY H
Sbjct: 519 AVSLQGIDGSKLIAGGILCN-PGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKE 577
Query: 357 AVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRD 416
A + ++V +D ++GK + P+FLK+ +V++ P+ VE FS+ LGR +R
Sbjct: 578 AARVTKIVALLD-KAGKPSKTAPRFLKSKQNAVVQVTLDAPVCVEEFSKCRALGRAFLRS 636
Query: 417 MRQTVAVGVIKNVEKKD 433
T+AVGV+ V +D
Sbjct: 637 GGSTIAVGVVTRVLGQD 653
>Os04g0595300 Zinc finger, RanBP2-type domain containing protein
Length = 656
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 250/437 (57%), Gaps = 13/437 (2%)
Query: 6 THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKA 65
+ +N+ ++GHVDSGKST +G L++ LG I K+ + + EKEA E K SF YAW +D+
Sbjct: 222 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 281
Query: 66 ERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEA 125
ERERG+T+ +A+ ET KY ++D+PGH+DF+ NMI+G +QAD A+L++D+ TG FEA
Sbjct: 282 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEA 341
Query: 126 GISKD-----GQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
G+ + GQT+EHA L + GV+Q+I NKMDA YSK R++ I ++ S+L+
Sbjct: 342 GMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGSFLRS 399
Query: 181 VGYNPDKIPFVPISGFEGDNMIERSTNL---DWYKGPTLLEALDQINEPKRPSDKPLRLP 237
+ + ++P+S E N+I+ +++ WY+G LL+A+D + P R KPL LP
Sbjct: 400 CNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGFCLLDAIDSLQLPSRDVSKPLILP 459
Query: 238 LQDVYKIGGIGT-VPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 296
+ DV K G G++ETG ++ G V P G VKS+E + A GDNV
Sbjct: 460 ICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNV 519
Query: 297 GFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHI 356
+++ + L G + N P + +V++++ I GY H
Sbjct: 520 AVSLQGIDGSKLILGGILCN-PGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVKE 578
Query: 357 AVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRD 416
A + ++V +D ++GK + P+FLK+ +V++ P+ V+ FS+ LGR +R
Sbjct: 579 AARVTKIVALLD-KAGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKCRALGRAFLRS 637
Query: 417 MRQTVAVGVIKNVEKKD 433
T+AVGV+ V ++D
Sbjct: 638 SGSTIAVGVVTRVLRQD 654
>Os04g0270100 Similar to G1 to S phase transition protein 1 homolog (GTP-binding
protein GST1- HS)
Length = 444
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 241/421 (57%), Gaps = 15/421 (3%)
Query: 7 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAE 66
H+N+V IGHVD+GKST G +++ G +D R I+++EKEA + ++ S+ A+++D + E
Sbjct: 20 HLNVVFIGHVDAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEE 79
Query: 67 RERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAG 126
R +G T+++ FET T++DAPGH+ ++ NMI+G SQAD VL+I + G FE G
Sbjct: 80 RLKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 139
Query: 127 ISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPD 186
K GQTREH LLA TLGV ++I NKMD T K+SK RYDEI ++ +L+ GYN
Sbjct: 140 YEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVK 199
Query: 187 K-IPFVPISGFEGDNMIER--STNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYK 243
K + F+PISG G NM R + W+ GP L E LD I P R P+R+P+ D YK
Sbjct: 200 KDVHFLPISGLLGSNMKTRMDKSICSWWDGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK 259
Query: 244 IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNV 303
+GTV +G++E+G ++ G + P+ +V + + ++ A P +NV + +
Sbjct: 260 --DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGI 317
Query: 304 AVKDLKRGYVASNSKDDPAKEAASFTSQVIIMN--HPGQIGNGYAPVLDCHTSHIAVKFA 361
+D+ G+V S S +P F +Q+ I+ GY VL H+ +
Sbjct: 318 EDEDIMAGFVLS-SIGNPVGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIV 376
Query: 362 ELVTKIDRRSGKELEKEPK-------FLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAV 414
+L+ +ID + KE + + K F+KNG + ++ + +E FS++P LGRF +
Sbjct: 377 DLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNNLICIENFSDFPQLGRFTL 436
Query: 415 R 415
R
Sbjct: 437 R 437
>AK110320
Length = 677
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 242/436 (55%), Gaps = 24/436 (5%)
Query: 5 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS-FKYAWVLDKL 63
+ H N+V GHVD+GKST G L+ G +D+R +++ ++EA EMN R ++ A+V D
Sbjct: 236 RPHYNVVFCGHVDAGKSTINGDLLIAHGAVDEREMQKLKREA-EMNHREGWEKAYVFDLS 294
Query: 64 KAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGF 123
+ ER +G T + FET TV+DAPGH+ F+ +MI G +QAD +V++I + G F
Sbjct: 295 EEERAKGKTHETGAGYFETANRRVTVLDAPGHKAFVPSMIGGATQADLSVMVISARRGEF 354
Query: 124 EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 183
EAG GQTREH L T GVK MIC NKMD ++S+ RYDEIV ++S + K+ G+
Sbjct: 355 EAGFENGGQTREHTTLLRTCGVKYMICIINKMDDC--EWSQERYDEIVGKLSPFFKQNGF 412
Query: 184 NPDK-IPFVPISGFEGDNMIE--RSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD 240
K + F+P +G G + + S WYKGP +L+ ++Q+ P+ SDK D
Sbjct: 413 VEKKNLTFMPGAGLLGLGIAKPIPSGACPWYKGPCMLDFINQLTLPETRSDK-------D 465
Query: 241 VYKIGGIGTV-------PVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPG 293
V I +G V G++E+G + G +T PS T V ++ + + +++A G
Sbjct: 466 VLCIPVVGCVKDDGKVHACGKIESGSVAVGDEITVLPSKRTFTVDAILVENTEIEKAYVG 525
Query: 294 DNVGFNVKNVAVKDLKRGYVASNS---KDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLD 350
DNV VK + D G+V + D+ + F + ++I+ I NG +L
Sbjct: 526 DNVHIRVKGLDESDFHPGFVMTQPGEVGDEKMRTCEFFQAVIMILEVENIISNGIKVMLH 585
Query: 351 CHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLG 410
H + V F +++ + D ++ K ++K+P F K G+ + ++ ++ + + +E+ +G
Sbjct: 586 AHAAQEEVVFDKMLAQCDPKTLKPIKKDPAFAKAGECVIARLELSQALTLAPQAEFDKMG 645
Query: 411 RFAVRDMRQTVAVGVI 426
RF +RD +T+A+G +
Sbjct: 646 RFMLRDKGRTIAIGRV 661
>AK108986
Length = 186
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 136/161 (84%)
Query: 273 LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQV 332
+ ++++EMHHE +QEA+PGDN+GFN KN++VKD++RG+V ++K+DP K A F +QV
Sbjct: 25 VVANIQTIEMHHEQMQEAVPGDNIGFNCKNISVKDVRRGFVCGDAKNDPPKGCADFNAQV 84
Query: 333 IIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKM 392
I++NHPGQI GY PVLDCHTSHIA KF+ELV+ ID+R+GK E+ PK +KNG A +VK+
Sbjct: 85 IVLNHPGQIAQGYCPVLDCHTSHIACKFSELVSLIDKRTGKATEENPKAIKNGQAAIVKL 144
Query: 393 IPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKD 433
+P+KP+ VETF++YPPLGRFAVRDMRQTVAVGVIK+V KK+
Sbjct: 145 VPSKPLCVETFTDYPPLGRFAVRDMRQTVAVGVIKSVTKKE 185
>Os02g0456200 Similar to G1 to S phase transition protein 1 homolog
Length = 371
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 184/329 (55%), Gaps = 15/329 (4%)
Query: 69 RGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGIS 128
+G T+++ FET T++DAPGH+ ++ NMI+G SQAD VL+I + G FE G
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYE 74
Query: 129 KDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDK- 187
+ GQTREH LLA TLGV +++ NKMD +T +SK RYDEI ++ +LK GYN K
Sbjct: 75 RGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKD 134
Query: 188 IPFVPISGFEGDNMIER--STNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIG 245
+ F+PISG G NM R +N W+ GP L E LD I P R P+R+P+ D YK
Sbjct: 135 VHFLPISGLLGTNMKTRMDKSNCSWWSGPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK-- 192
Query: 246 GIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAV 305
+GTV +G++E+G + G + P+ +V SV + ++ A PG+NV + +
Sbjct: 193 DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEE 252
Query: 306 KDLKRGYVASNSKDDPAKEAASFTSQVIIMN--HPGQIGNGYAPVLDCHTSHIAVKFAEL 363
D+ G+V S+ K +P + F +Q+ I+ GY VL H+ + EL
Sbjct: 253 DDITAGFVLSSIK-NPVSAISEFRAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVEL 311
Query: 364 VTKIDRRSGKE-------LEKEPKFLKNG 385
+ +ID + KE +++P F+KNG
Sbjct: 312 IEEIDLKRRKEGDIKKKKSKRKPLFVKNG 340
>Os03g0851100 Similar to Translational elongation factor EF-TuM
Length = 453
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 208/436 (47%), Gaps = 56/436 (12%)
Query: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
+ K H+N+ IGHVD GK+T T I + EA + +F +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTA------------AITKVLAEAGKAKAVAFDE---IDK 107
Query: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
E+ RGITI A ++ET K + +D PGH D++KNMITG +Q D +L++ + G
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGP 167
Query: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG 182
QT+EH LLA +GV ++C NK+DA + ++E+ S+ K G
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPG 220
Query: 183 YNPDKIPFV---PISGFEGDN-MIERSTNLDWYKGPTLLEALDQ-INEPKRPSDKPLRLP 237
D+IP + +S +G N I ++ L L++A+D+ I +P R DK +P
Sbjct: 221 ---DEIPIIRGSALSALQGTNDEIGKNAILK------LMDAVDEYIPDPVRQLDKSFLMP 271
Query: 238 LQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSG-LTTEVKSVEMHHEALQEALPG 293
++DV+ I G GTV GRVE G +K G ++ PSG L T V VEM + L G
Sbjct: 272 IEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAG 331
Query: 294 DNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHT 353
DNVG ++ + D++RG V K K F +++ ++ G + L ++
Sbjct: 332 DNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLTK--DEGGRHTAFLSNYS 387
Query: 354 SHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFA 413
+ A++ K+ G E+ + GD P+ +E P RFA
Sbjct: 388 PQFYFRTADVTGKVVLPDGVEM------VMPGDNVTAGFELISPVPLE------PGQRFA 435
Query: 414 VRDMRQTVAVGVIKNV 429
+R+ +TV GV+ V
Sbjct: 436 LREGGRTVGAGVVSKV 451
>Os02g0595700 Chloroplast translational elongation factor Tu
Length = 467
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 212/445 (47%), Gaps = 59/445 (13%)
Query: 3 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
+ K H+NI IGHVD GK+T T L L + +++++ +D
Sbjct: 66 RTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE---------------IDA 110
Query: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ G
Sbjct: 111 APEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 170
Query: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG 182
QT+EH LLA +GV +++ NK D + + V+E+ S +
Sbjct: 171 MP-------QTKEHILLAKQVGVPKIVVFLNKKDQVDDEELLQLVELEVRELLSSYE--- 220
Query: 183 YNPDKIPFVPISGFEG-DNMIE----RSTNLDWYKGP-TLLEALDQ-INEPKRPSDKPLR 235
Y+ D++P V S + +N++ + + +W G +L++++D I P+R +D P
Sbjct: 221 YDGDEVPIVAGSALKALENLMANPAIKRGDDEWVDGIFSLIDSVDNYIPVPQRQTDLPFL 280
Query: 236 LPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEAL 291
L ++DV+ I G GTV GR+E G +K G V G+ V VEM + + +A+
Sbjct: 281 LAVEDVFSITGRGTVATGRIERGTVKVGDTVDI--VGIRETRNCTVTGVEMFQKTMDDAM 338
Query: 292 PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDC 351
GDNVG ++ + D++RG V + PA ++ G ++P
Sbjct: 339 AGDNVGLLLRGMQKDDIERGMVLAK----PASITPHTKFDAVVYVLKKDEGGRHSPFFPG 394
Query: 352 HTSHIAVKFAEL---VTKIDRRSGKELEKEPKFLKNGDAGMVKMIP--TKPMVVETFSEY 406
+ ++ ++ VTKI + ++E K GD VKM+ +P+ E
Sbjct: 395 YRPQFYMRTTDVTGNVTKI----MNDKDEEAKMCMPGD--RVKMVVELIQPVACEQGM-- 446
Query: 407 PPLGRFAVRDMRQTVAVGVIKNVEK 431
RFA+R+ +TV GVI + K
Sbjct: 447 ----RFAIREGGKTVGAGVINTILK 467
>D10400
Length = 49
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/43 (90%), Positives = 39/43 (90%)
Query: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKA 165
EAGISKDGQTREH LLAFTLGVKQM CCCNKMDATTPKY KA
Sbjct: 2 LEAGISKDGQTREHPLLAFTLGVKQMTCCCNKMDATTPKYPKA 44
>Os02g0456500
Length = 238
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%)
Query: 5 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
K H+N+V IGHVD+GKST G +++ G +D R I+++EKEA + ++ S+ A+++D +
Sbjct: 108 KRHLNVVFIGHVDAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNE 167
Query: 65 AERER 69
ER +
Sbjct: 168 EERAK 172
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,826,665
Number of extensions: 617004
Number of successful extensions: 1364
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 1329
Number of HSP's successfully gapped: 18
Length of query: 447
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 343
Effective length of database: 11,605,545
Effective search space: 3980701935
Effective search space used: 3980701935
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)