BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0174300 Os03g0174300|AK067994
(576 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0174300 Exostosin-like family protein 1172 0.0
Os03g0107900 Exostosin-like family protein 120 2e-27
Os01g0926400 Similar to Pectin-glucuronyltransferase 113 3e-25
Os04g0398600 Similar to Pectin-glucuronyltransferase 105 8e-23
Os01g0926600 Similar to Pectin-glucuronyltransferase 105 1e-22
>Os03g0174300 Exostosin-like family protein
Length = 576
Score = 1172 bits (3033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/576 (97%), Positives = 559/576 (97%)
Query: 1 MQMLSWICWLSYTGKRCEEVQKVECNLPSSQEWPVGRWIVSICPAHCDTTRAMCFCGPGT 60
MQMLSWICWLSYTGKRCEEVQKVECNLPSSQEWPVGRWIVSICPAHCDTTRAMCFCGPGT
Sbjct: 1 MQMLSWICWLSYTGKRCEEVQKVECNLPSSQEWPVGRWIVSICPAHCDTTRAMCFCGPGT 60
Query: 61 KYPDRPVAEACGFKTILPKKPDDSKLTDWKTPDPDVFTTNKSKPGWCNVNPEDAYSSKVK 120
KYPDRPVAEACGFKTILPKKPDDSKLTDWKTPDPDVFTTNKSKPGWCNVNPEDAYSSKVK
Sbjct: 61 KYPDRPVAEACGFKTILPKKPDDSKLTDWKTPDPDVFTTNKSKPGWCNVNPEDAYSSKVK 120
Query: 121 FKEECDCKYDGLWGRFCETRVECSCINQCSGHGHCRGGFCQCDGGYFGIDCSMPSNYSVA 180
FKEECDCKYDGLWGRFCETRVECSCINQCSGHGHCRGGFCQCDGGYFGIDCSMPSNYSVA
Sbjct: 121 FKEECDCKYDGLWGRFCETRVECSCINQCSGHGHCRGGFCQCDGGYFGIDCSMPSNYSVA 180
Query: 181 YGMPSWLQPPMNLPDLXXXXXXXXXXXXXXXXXRPLIYVYDLPAEFDSHLLEGRHYKFQC 240
YGMPSWLQPPMNLPDL RPLIYVYDLPAEFDSHLLEGRHYKFQC
Sbjct: 181 YGMPSWLQPPMNLPDLKNISSSSINVKVVAKKKRPLIYVYDLPAEFDSHLLEGRHYKFQC 240
Query: 241 VNRIYDDKNRTIWTQQLYGAQIALYESILASPHRTLNGDEADYFYVPALDSCLITRSDDA 300
VNRIYDDKNRTIWTQQLYGAQIALYESILASPHRTLNGDEADYFYVPALDSCLITRSDDA
Sbjct: 241 VNRIYDDKNRTIWTQQLYGAQIALYESILASPHRTLNGDEADYFYVPALDSCLITRSDDA 300
Query: 301 PHLQMPRDLRLRSYHTLEYYRMTYDHIAQRYPYWNRTSGRDHIWFFSWDEGACYAPKEIW 360
PHLQMPRDLRLRSYHTLEYYRMTYDHIAQRYPYWNRTSGRDHIWFFSWDEGACYAPKEIW
Sbjct: 301 PHLQMPRDLRLRSYHTLEYYRMTYDHIAQRYPYWNRTSGRDHIWFFSWDEGACYAPKEIW 360
Query: 361 NSMMLVHWGNTNTKHKNSTTAYWADNWNYIPIDRRGNHPCFDPRKDLVLPAWKQPNPAAI 420
NSMMLVHWGNTNTKHKNSTTAYWADNWNYIPIDRRGNHPCFDPRKDLVLPAWKQPNPAAI
Sbjct: 361 NSMMLVHWGNTNTKHKNSTTAYWADNWNYIPIDRRGNHPCFDPRKDLVLPAWKQPNPAAI 420
Query: 421 WLKLWARTRNNRTTLFYFNGNLGPAYKDGRHEDTYSMGIRQKLAAEFGSTPDKQGKLGRQ 480
WLKLWARTRNNRTTLFYFNGNLGPAYKDGRHEDTYSMGIRQKLAAEFGSTPDKQGKLGRQ
Sbjct: 421 WLKLWARTRNNRTTLFYFNGNLGPAYKDGRHEDTYSMGIRQKLAAEFGSTPDKQGKLGRQ 480
Query: 481 HTANVTVTYLRTEKYYEELASSIFCGVLPGDGWSGRMEDSMLQGCIPVIIQDGILLPYEN 540
HTANVTVTYLRTEKYYEELASSIFCGVLPGDGWSGRMEDSMLQGCIPVIIQDGILLPYEN
Sbjct: 481 HTANVTVTYLRTEKYYEELASSIFCGVLPGDGWSGRMEDSMLQGCIPVIIQDGILLPYEN 540
Query: 541 MLNYNSFAVRIQEDDIPNLIRILRVCVCINSPFVRL 576
MLNYNSFAVRIQEDDIPNLIRILRVCVCINSPFVRL
Sbjct: 541 MLNYNSFAVRIQEDDIPNLIRILRVCVCINSPFVRL 576
>Os03g0107900 Exostosin-like family protein
Length = 427
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 155/357 (43%), Gaps = 61/357 (17%)
Query: 217 IYVYDLPAEFDSHLLEGRHYKFQCVNRIYDDKNRTIWTQQLYGAQIALYESILASPHRTL 276
IYVYDLPA F+ H + +C L+ A++AL+E++LA R
Sbjct: 76 IYVYDLPARFNRHWVAA---DARCAT-------------HLFAAEVALHEALLAYAGRAA 119
Query: 277 NGDEADYFYVPALDSCLITRSDDAPHLQMPRDLRLRSYHTLEYYRMTYDHIAQRYPYWNR 336
D+A F+VP SC + + P L R L + D + + PYWNR
Sbjct: 120 RPDDATLFFVPVYVSCNFSTDNGFPSLSHARALLADAV----------DLVRAQMPYWNR 169
Query: 337 TSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNTKHKNSTTAYWADNWNYIPIDRRG 396
++G DH++ S D GAC+ P E + + + + +G
Sbjct: 170 SAGADHVFVASHDFGACFHPME-------------DVAIADGIPEFLKRSILLQTFGVQG 216
Query: 397 NHPCFDPRKDLVLPAWKQPNPAAIWLKLWARTRNNRTTLFYFNGNL--GPAYKDGRHEDT 454
H C + ++ P P + L+L + R +F G + P GR
Sbjct: 217 THVCQEADHVVIPPH----VPPEVALELPEPEKAQRDIFAFFRGKMEVHPKNISGRF--- 269
Query: 455 YSMGIRQKLAAEFGSTPDKQGKLGRQHTANVTVTYLRTEKYYEELASSIFCGVLPG-DGW 513
YS +R +L ++G +++ L R+ N Y E+A S+FC G W
Sbjct: 270 YSKKVRTELLQKYGR--NRKFYLKRKRYGN----------YRSEMARSLFCLCPLGWAPW 317
Query: 514 SGRMEDSMLQGCIPVIIQDGILLPYENMLNYNSFAVRIQEDDIPNLIRILRVCVCIN 570
S R+ +S+L GCIPVII D I LP+ ++L + ++++ E D+ +L +L V N
Sbjct: 318 SPRLVESVLLGCIPVIIADDIRLPFPSVLQWLDISLQVAEKDVASLEMVLDHVVATN 374
>Os01g0926400 Similar to Pectin-glucuronyltransferase
Length = 422
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 154/353 (43%), Gaps = 69/353 (19%)
Query: 217 IYVYDLPAEFDSHLLEGRHYKFQCVNRIYDDKNRTIWTQQLYGAQIALYESILASPHRTL 276
++VY++P +++ +LL +C+ Q ++ A+I +++ +L+SP RTL
Sbjct: 58 VFVYEMPRKYNLNLLAKDS---RCL-------------QHMFAAEIFMHQFLLSSPVRTL 101
Query: 277 NGDEADYFYVPALDSCLITRSDDAPHLQMPRDLRLRSYHTLEYYRMTYDHIAQRYPYWNR 336
+ +EAD+FY PA +C +T + PR + R ++A +PYWNR
Sbjct: 102 DPEEADWFYTPAYTTCDLTPQGFPLPFRAPRIM-----------RSAVRYVAATWPYWNR 150
Query: 337 TSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNTKHKNSTTAYWADNWNYIPIDRRG 396
T G DH + D GAC+ + + G + + +
Sbjct: 151 TDGADHFFLAPHDFGACFH----YQEERAIERGILPVLRRATLVQTFGQR---------- 196
Query: 397 NHPCFDPRKDLVLPAWKQPNPAAIWLKLWAR---TRNNRTTLFYFNGNLGPAYKDGRHED 453
+HPC P + +P + P K+ A R+ YF G Y G +
Sbjct: 197 HHPCLQP-GSITVPPYADPR------KMEAHRISPATPRSIFVYFRGLF---YDMGNDPE 246
Query: 454 T--YSMGIRQKLAAEFGSTPDKQGKLGRQHTANVTVTYLRTEKYYEELASSIFCGVLPG- 510
Y+ G R + F P + +H A YYE++ +IFC G
Sbjct: 247 GGYYARGARASVWENFKDNP--LFDISTEHPAT----------YYEDMQRAIFCLCPLGW 294
Query: 511 DGWSGRMEDSMLQGCIPVIIQDGILLPYENMLNYNSFAVRIQEDDIPNLIRIL 563
WS R+ ++++ GCIPVII D I+LP+ + + + +V + E+D+P L IL
Sbjct: 295 APWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWGEISVFVAEEDVPRLDTIL 347
>Os04g0398600 Similar to Pectin-glucuronyltransferase
Length = 420
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 148/350 (42%), Gaps = 63/350 (18%)
Query: 217 IYVYDLPAEFDSHLLEGRHYKFQCVNRIYDDKNRTIWTQQLYGAQIALYESILASPHRTL 276
+++YDLP +++ ++ +C+N ++ A+I ++ +L+S RTL
Sbjct: 56 VFIYDLPRKYNKKMVNKDP---RCLN-------------HMFAAEIFMHRFLLSSAVRTL 99
Query: 277 NGDEADYFYVPALDSCLITRSDDAPHLQMPRDLRLRSYHTLEYYRMTYDHIAQRYPYWNR 336
N EAD+FY P +C +T + + PR +R +I+ ++P+WNR
Sbjct: 100 NPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMR-----------SAIQYISHKWPFWNR 148
Query: 337 TSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNTKHKNSTTAYWADNWNYIPIDRRG 396
T G DH + D GAC+ + + G + + +
Sbjct: 149 TDGADHFFVVPHDFGACFH----YQEEKAIERGILPLLQRATLVQTFGQE---------- 194
Query: 397 NHPCFDPRKDLVLPAWKQPNPAAIWLKLWARTRNNRTTLFYFNGNLGPAYKDGRHEDT-- 454
NH C + +P + P L R+ YF G Y G +
Sbjct: 195 NHVCLK-EGSITIPPYAPPQKMQAHL---IPPDTPRSIFVYFRGLF---YDTGNDPEGGY 247
Query: 455 YSMGIRQKLAAEFGSTPDKQGKLGRQHTANVTVTYLRTEKYYEELASSIFCGVLPG-DGW 513
Y+ G R L F + P +++ + T YYE++ ++FC G W
Sbjct: 248 YARGARASLWENFKNNP----------LFDISTDHPPT--YYEDMQRAVFCLCPLGWAPW 295
Query: 514 SGRMEDSMLQGCIPVIIQDGILLPYENMLNYNSFAVRIQEDDIPNLIRIL 563
S R+ ++++ GCIPVII D I+LP+ + + + V ++E D+P L IL
Sbjct: 296 SPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVEEKDVPKLDTIL 345
>Os01g0926600 Similar to Pectin-glucuronyltransferase
Length = 415
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 147/357 (41%), Gaps = 77/357 (21%)
Query: 217 IYVYDLPAEFDSHLLEGRHYKFQCVNRIYDDKNRTIWTQQLYGAQIALYESILASPHRTL 276
+YVY+LP +++ ++ +C++ ++ A+I ++ +L+S RTL
Sbjct: 51 VYVYELPTKYNKKMVAKDS---RCLS-------------HMFAAEIFMHRFLLSSAIRTL 94
Query: 277 NGDEADYFYVPALDSCLITRSDDAPHLQMPRDLRLRSYHTLEYYRMTYDHIAQRYPYWNR 336
N +EAD+FY P +C +T + PR + R I+ +PYWNR
Sbjct: 95 NPEEADWFYTPVYTTCDLTPWGHPLPFKSPRIM-----------RSAIQFISSHWPYWNR 143
Query: 337 TSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNTKHKNSTTAYWADNWNYIPIDRRG 396
T G DH + D GAC+ H+ + +P+ RR
Sbjct: 144 TDGADHFFVVPHDFGACF------------HYQEEKAIER-----------GILPLLRRA 180
Query: 397 ---------NHPCFDPRKDLVLPAWKQPNPAAIWLKLWARTRNNRTTLFYFNGNLGPAYK 447
+H C + +P + P L R+ YF G
Sbjct: 181 TLVQTFGQKDHVCLK-EGSITIPPYAPPQKMKTHL---VPPETPRSIFVYFRGLFYDTAN 236
Query: 448 DGRHEDTYSMGIRQKLAAEFGSTPDKQGKLGRQHTANVTVTYLRTEKYYEELASSIFCGV 507
D Y+ G R + F + P +++ + T YYE++ SIFC
Sbjct: 237 DPEG-GYYARGARASVWENFKNNP----------LFDISTDHPPT--YYEDMQRSIFCLC 283
Query: 508 LPG-DGWSGRMEDSMLQGCIPVIIQDGILLPYENMLNYNSFAVRIQEDDIPNLIRIL 563
G WS R+ ++++ GCIPVII D I+LP+ + + ++ V + EDD+P L IL
Sbjct: 284 PLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVAEDDVPKLDTIL 340
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.477
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 23,239,209
Number of extensions: 1077521
Number of successful extensions: 2146
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2140
Number of HSP's successfully gapped: 5
Length of query: 576
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 470
Effective length of database: 11,501,117
Effective search space: 5405524990
Effective search space used: 5405524990
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)