Os03g0174300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exostosin-like family protein.
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Os03g0174300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exostosin-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.46 | 0.306 | 8.8 | -0.579 | 0.73 | 1.27 | 1.25 | 0.233 | 0.0192 | 18.6 | 25.5 | 277 | -- | -- |
| 42.51 | 0.304 | 8.79 | -0.543 | 0.735 | 1.25 | 1.21 | -- | 0.0283 | 18.6 | 25.59 | 285 | -- | -- |
| 46.15 | 0.316 | 8.79 | -0.547 | 0.719 | 1.23 | -- | -0.022 | 0.0156 | 18.6 | 25.42 | 294 | -- | -- |
| 46.11 | 0.316 | 8.79 | -0.556 | 0.737 | 1.27 | -- | -- | 0.0338 | 18.5 | 25.5 | 284 | -- | -- |
| 69.19 | 0.387 | 8.8 | -0.709 | -- | 1.17 | -- | 0.225 | -0.0674 | -- | 23.94 | 138 | -- | -- |
| 65.66 | 0.38 | 8.85 | -0.857 | 0.568 | -- | 1.21 | -- | -0.236 | 19.3 | -- | -- | -- | -- |
| 69.58 | 0.391 | 8.85 | -0.882 | 0.57 | -- | -- | -- | -0.234 | 19.2 | -- | -- | -- | -- |
| 69.25 | 0.388 | 8.79 | -0.631 | -- | 1.1 | -- | -- | -0.0657 | -- | 24 | 181 | -- | -- |
| 53.38 | 0.34 | 8.77 | -- | 0.773 | 1.5 | -- | -- | 0.136 | 18.3 | 25.5 | 278 | -- | -- |
| 86.8 | 0.435 | 8.83 | -0.893 | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
| 90.1 | 0.444 | 8.83 | -- | 0.579 | -- | -- | -- | -0.135 | 19.1 | -- | -- | -- | -- |
| 71.73 | 0.394 | 8.75 | -- | -- | 1.43 | -- | -- | 0.0939 | -- | 22.6 | 7638 | -- | -- |
| 107.81 | 0.485 | 8.81 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 2 | 30.16 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 16 | 33.34 | temperature | 20 | 270 | > th | dose dependent | sin | 8 | NA |
| 22 | 33.64 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 36 | 35.32 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 71 | 37.22 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 15 |
| 92 | 38.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 195 | 40.96 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 209 | 41.16 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 212 | 41.27 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 253 | 41.77 | temperature | 25 | 270 | < th | dose independent | sin | 8 | NA |
| 300 | 42.17 | temperature | 25 | 270 | > th | dose independent | sin | 8 | NA |
| 305 | 42.21 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 21 |
| 348 | 42.71 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 358 | 42.78 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 411 | 43.17 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 424 | 43.26 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 456 | 43.55 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 509 | 43.92 | temperature | 25 | 720 | < th | dose dependent | sin | 14 | NA |
| 638 | 44.67 | temperature | 25 | 270 | < th | dose independent | rect. | 22 | 11 |
| 643 | 44.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 722 | 45.02 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 831 | 45.53 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 973 | 46.08 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 8 |
| 998 | 46.15 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |