BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0654100 Os02g0654100|AK101814
(300 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0654100 Similar to Enoyl-CoA hydratase 570 e-163
Os02g0654000 Enoyl-CoA hydratase/isomerase domain containin... 193 2e-49
Os01g0925200 Similar to Enoyl CoA hydratase-like protein 105 5e-23
Os01g0662700 Similar to Naphthoate synthase (EC 4.1.3.36) 94 1e-19
Os03g0310400 Enoyl-CoA hydratase/isomerase domain containin... 87 1e-17
Os05g0362100 Similar to Protein MFP-b 66 3e-11
>Os02g0654100 Similar to Enoyl-CoA hydratase
Length = 300
Score = 570 bits (1470), Expect = e-163, Method: Compositional matrix adjust.
Identities = 287/300 (95%), Positives = 287/300 (95%)
Query: 1 MRILRGILAVSGHLAGRRAPANNAHLALFSRALQILAQQEPVRLQKLSAPDSGIVEMRLE 60
MRILRGILAVSGHLAGRRAPANNAHLALFSRALQILAQQEPVRLQKLSAPDSGIVEMRLE
Sbjct: 1 MRILRGILAVSGHLAGRRAPANNAHLALFSRALQILAQQEPVRLQKLSAPDSGIVEMRLE 60
Query: 61 RPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLKERRLMSPCEVR 120
RPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLKERRLMSPCEVR
Sbjct: 61 RPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLKERRLMSPCEVR 120
Query: 121 EFVNSLRSTFLSFEALSIPTIAIVXXXXXXXXXXXXXSCDLRICGENATFSLPETGLAII 180
EFVNSLRSTFLSFEALSIPTIAIV SCDLRICGENATFSLPETGLAII
Sbjct: 121 EFVNSLRSTFLSFEALSIPTIAIVEGAAFGGGLELALSCDLRICGENATFSLPETGLAII 180
Query: 181 PGAGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGVVNYCVPAGEAYKRALELAQEIN 240
PGAGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGVVNYCVPAGEAYKRALELAQEIN
Sbjct: 181 PGAGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGVVNYCVPAGEAYKRALELAQEIN 240
Query: 241 QKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQVLHTQDRLEGLAAFAEKRKPVYTGK 300
QKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQVLHTQDRLEGLAAFAEKRKPVYTGK
Sbjct: 241 QKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQVLHTQDRLEGLAAFAEKRKPVYTGK 300
>Os02g0654000 Enoyl-CoA hydratase/isomerase domain containing protein
Length = 128
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/127 (72%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
Query: 175 TGLAIIPGAGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGVVNYCVPAGEAYKRALE 234
+ ++ AGGTQRLPRIVG+SRAKE+IFTGRR +A EAV MG+ NYCVPAGEA+++ALE
Sbjct: 2 SSFTVLRRAGGTQRLPRIVGRSRAKEMIFTGRRCNATEAVMMGLANYCVPAGEAHEKALE 61
Query: 235 LAQEINQKGPLAIRMAKKAINQGME-VDLSAGLAVEEECYEQVLHTQDRLEGLAAFAEKR 293
LA+EI QKGPL IRMAKKAI+QGM+ D+ + LAVE ECYEQ+LHT+DRLEGLAAFAE+R
Sbjct: 62 LAREIAQKGPLGIRMAKKAIDQGMQAADMPSALAVEGECYEQLLHTEDRLEGLAAFAERR 121
Query: 294 KPVYTGK 300
KPVY+GK
Sbjct: 122 KPVYSGK 128
>Os01g0925200 Similar to Enoyl CoA hydratase-like protein
Length = 291
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 50 PDSGIVEMRLERPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLK 109
P + + E+RL RP NA+ + + A+ + A+ V+L+++ P FCAG +L
Sbjct: 30 PSAAVYEVRLNRPTRLNALSPDAFAEIPRAMALLDRAPAARAVVLSAAGPH-FCAGIELG 88
Query: 110 ERRLMSPCE-------------VREFVNSLRSTFLSFEALSIPTIAIVXXXXXXXXXXXX 156
SP +R + +++ + E P +A V
Sbjct: 89 SPG--SPATAPSGDPAPAAAEGLRRAILEMQAALTAIERCRKPVVAAVHGACVGGGVEVV 146
Query: 157 XSCDLRICGENATFSLPETGLAIIPGAGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTM 216
+CD+R C ++ATF L E +AI+ G QRLPRIVG A +L TGR+ A+EA M
Sbjct: 147 AACDIRCCSKDATFVLREVDMAIVADLGALQRLPRIVGYGNAADLALTGRKITAMEAKEM 206
Query: 217 GVVNYCVPAGEAYKRAL-ELAQEINQKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQ 275
G+V + + + ++A+EI++K A+ K + + ++ + GL
Sbjct: 207 GLVTRVFNSKQELDAGVAKIAKEISEKSAWAVMGTKAVLLRSRDITVEQGLEHVATWNAA 266
Query: 276 VLHTQDRLEGLAAFAEKRKPVYT 298
+L + D E + AF EKRKPV++
Sbjct: 267 MLRSNDLEEAIQAFLEKRKPVFS 289
>Os01g0662700 Similar to Naphthoate synthase (EC 4.1.3.36)
Length = 331
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 6/249 (2%)
Query: 53 GIVEMRLERPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLKERR 112
GI ++ + RP+ RNA ++ L A E + D++ V++L + FC+G D R
Sbjct: 80 GIAKITINRPDRRNAFRPLTVKELMRAFEDARDDSSIGVIILTGKGTQSFCSGGDQALRD 139
Query: 113 LMSPCEVREF--VNSLRSTFLSFEALSIPTIAIVXXXXXXXXXXXXXSCDLRICGENATF 170
+ F +N L + L P IA+V CDL I +NA F
Sbjct: 140 ADGYVDFDSFGRLNVL-DLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIF 198
Query: 171 SLPETGLAIIPGAGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGVVNYCVPAGEAYK 230
+ GT + R+VG +A+E+ F R + A EA MG+VN VP + +
Sbjct: 199 GQTGPKVGSFDAGYGTSIMSRLVGPKKAREMWFLSRFYTADEADRMGLVNVVVPLADLER 258
Query: 231 RALELAQEINQKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQVLH-TQDRLEGLAAF 289
++ ++I + P AIR+ K A+N D AGL + + T++ EG A+
Sbjct: 259 ETVKWCRKILRNSPTAIRVLKSALNAAD--DGHAGLQELGGNATLIFYGTEEAKEGKNAY 316
Query: 290 AEKRKPVYT 298
E+R+P ++
Sbjct: 317 MERRRPDFS 325
>Os03g0310400 Enoyl-CoA hydratase/isomerase domain containing protein
Length = 268
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 50 PDSGIVEMRLERPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLK 109
P S + + + RP+A NA+ R M+ L +A ++ AD V+LA + FC+G DL
Sbjct: 19 PGSRVAVVTINRPKALNALTRPMMVSLAAAFRRLDADDGVAAVVLAGR-GRAFCSGVDLT 77
Query: 110 ERRLMSPCEVREFVNSLRSTFLSFEALSIPTIAIVXXXXXXXXXXXXXSCDLRICGENAT 169
+ +V++ + E P + + +CD+ + G +A
Sbjct: 78 AAEEVFKGDVKD---PAADPVVQMERCRKPIVGAIAGFAVTAGFEIALACDILVAGRSAK 134
Query: 170 FSLPETGLAIIPGAGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGVVNYCVPAGEAY 229
F I P G +Q+L R++G +RA+E+ T A A G+VN+ V +
Sbjct: 135 FIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIVDDTQVL 194
Query: 230 KRALELAQEINQKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQVLH--TQDRLEGLA 287
+A+E+ + I + + + K IN G+++DL A+E+E + T+++ +
Sbjct: 195 SKAIEVCEAIARNNRNLVVLYKSVINDGLQLDLEHARALEKERAHDYYNGMTKEQFASMQ 254
Query: 288 AFAEKR 293
F + R
Sbjct: 255 KFIQGR 260
>Os05g0362100 Similar to Protein MFP-b
Length = 465
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 44/81 (54%)
Query: 159 CDLRICGENATFSLPETGLAIIPGAGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGV 218
C R+ +A LPE L IIPG GGTQRLPR+VG +A E++ + VEA G+
Sbjct: 117 CHARVSTSSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGL 176
Query: 219 VNYCVPAGEAYKRALELAQEI 239
V+ V A E A A EI
Sbjct: 177 VDAVVSADELISTACSWALEI 197
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,590,186
Number of extensions: 307946
Number of successful extensions: 704
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 700
Number of HSP's successfully gapped: 6
Length of query: 300
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 200
Effective length of database: 11,814,401
Effective search space: 2362880200
Effective search space used: 2362880200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)