Os05g0362100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein MFP-b.
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Os05g0362100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein MFP-b.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 147.13 | 0.57 | 5.6 | -1.48 | 0.529 | -2.65 | 0.715 | 0.191 | 0.146 | 5.16 | 29.41 | 10 | -- | -- |
| 147.16 | 0.565 | 5.6 | -1.45 | 0.527 | -2.66 | 0.763 | -- | 0.151 | 5.11 | 29.24 | 10 | -- | -- |
| 147.82 | 0.566 | 5.6 | -1.48 | 0.486 | -2.56 | -- | 0.297 | 0.145 | 5.71 | 28.54 | 10 | -- | -- |
| 147.98 | 0.567 | 5.6 | -1.44 | 0.491 | -2.58 | -- | -- | 0.147 | 5.75 | 28.46 | 10 | -- | -- |
| 157.8 | 0.585 | 5.6 | -1.4 | -- | -2.36 | -- | 0.229 | 0.167 | -- | 27.47 | 10 | -- | -- |
| 239.99 | 0.726 | 5.47 | -0.791 | 0.673 | -- | -0.421 | -- | 0.691 | 11.8 | -- | -- | -- | -- |
| 240.75 | 0.727 | 5.47 | -0.809 | 0.674 | -- | -- | -- | 0.689 | 11.7 | -- | -- | -- | -- |
| 157.81 | 0.585 | 5.6 | -1.37 | -- | -2.38 | -- | -- | 0.175 | -- | 27.35 | 10 | -- | -- |
| 196.54 | 0.657 | 5.53 | -- | 0.385 | -1.98 | -- | -- | 0.423 | 7.44 | 28.46 | 10 | -- | -- |
| 269.37 | 0.767 | 5.49 | -0.828 | -- | -- | -- | -- | 0.681 | -- | -- | -- | -- | -- |
| 257.99 | 0.751 | 5.45 | -- | 0.684 | -- | -- | -- | 0.779 | 11.8 | -- | -- | -- | -- |
| 203.62 | 0.667 | 5.55 | -- | -- | -1.98 | -- | -- | 0.405 | -- | 27.47 | 3 | -- | -- |
| 287.46 | 0.791 | 5.47 | -- | -- | -- | -- | -- | 0.773 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.48 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 2 | 141.83 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 3 | 142.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 12 | 142.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 13 | 142.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 27 | 143.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 48 | 143.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 71 | 144.10 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 83 | 144.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 85 | 144.37 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 210 | 145.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 226 | 146.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 259 | 146.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 17 |
| 288 | 146.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 324 | 146.96 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 387 | 147.38 | temperature | 20 | 720 | > th | dose dependent | sin | 11 | NA |
| 400 | 147.46 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 413 | 147.52 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 417 | 147.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 423 | 147.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 429 | 147.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 442 | 147.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 456 | 147.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 463 | 147.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 518 | 148.04 | temperature | 30 | 1440 | < th | dose dependent | sin | 18 | NA |
| 540 | 148.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 692 | 148.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 788 | 149.36 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 904 | 149.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |